Silurus meridionalis (southern catfish): 124402705
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Entry
124402705 CDS
T08004
Symbol
rnf126
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124402705 (rnf126)
04121 Ubiquitin system [BR:
smeo04121
]
124402705 (rnf126)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124402705 (rnf126)
Membrane trafficking [BR:
smeo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
124402705 (rnf126)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124402705 (rnf126)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
zf_UBZ
DZR_2
HypA
PHD
Motif
Other DBs
NCBI-GeneID:
124402705
NCBI-ProteinID:
XP_046731827
LinkDB
All DBs
Position
20:complement(6523333..6532748)
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AA seq
306 aa
AA seq
DB search
MAEAPVRTCRYFCHQCSAEINPRLPDYICPRCNSGFIEELLQERNTETGFTSTSTSDQNR
HSVETLDPTGFTFPHQYSQLALNIFTDTFDLHSALTSEDGENRREREMSSRHRYMARQPR
GRPVPRRQGTRHEGVPTLEGIIQQLVNGIIAPTAMPNMGIGPWGVLHSNPMDYAWGANGL
DAIITQLLNQFENTGPPPADREKIKNLPTIQITDEHVGDGLECPVCKEDYSEGESVRQLP
CNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTATDPPDLSGINFSPSTSSLSSPSSPNNE
NAANNS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctcccgtacggacctgccggtatttctgtcaccaatgttctgcagagata
aaccctcgtctcccggattacatctgtccccggtgcaattctggcttcatcgaggagtta
ctacaggagagaaatacagagactggttttacttccacatccaccagcgatcagaaccgc
cattcagtcgagactctggatccgactggatttaccttcccacatcagtacagccaattg
gctctaaacatcttcactgacactttcgacctccactcggccttgacctctgaggatggt
gagaaccgccgggagcgtgagatgtcttcacgccatcgctacatggccagacaacctcgg
ggacgccccgttccccggagacaagggacacggcacgaaggagttcccactttagagggg
ataattcagcagctagtgaacggaatcatcgcaccaacagctatgccaaatatgggaata
ggaccatggggagtgctacattcaaatccaatggactatgcatggggtgccaacggcttg
gacgccattattacacagttattaaatcagtttgaaaatacgggtccacctcctgcagac
agagaaaagatcaaaaacctcccgacaattcagatcacagacgagcatgtgggagatggt
ttagaatgtcctgtgtgtaaagaagactacagcgagggagagagcgttagacaacttcca
tgcaaccatctctttcacaacgactgtatagtgccctggctcgaacagcacgacacatgt
ccggtgtgcaggaaaagcttgagcggccagaacacagccacagatcctcctgacttatca
ggaattaacttttcaccttccacatcatcattgtcctcccccagttcccccaataacgag
aacgctgccaacaactcctaa
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