Silurus meridionalis (southern catfish): 124402731
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Entry
124402731 CDS
T08004
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smeo03032
]
124402731 (pif1)
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124402731 (pif1)
Enzymes [BR:
smeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
124402731 (pif1)
DNA replication proteins [BR:
smeo03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
124402731 (pif1)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
124402731 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
DEAD
UvrD_C_2
Mg_chelatase
RsgA_GTPase
AAA_5
Herpes_Helicase
AAA_7
AAA_16
ABC_tran
PhoH
P-loop_TraG
Motif
Other DBs
NCBI-GeneID:
124402731
NCBI-ProteinID:
XP_046731866
LinkDB
All DBs
Position
20:1321853..1331038
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AA seq
643 aa
AA seq
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MLQVEDGARLECSVAVERVSGASAGHALQRRVLRRAAVTLGRDEFRELVLRVQDVRGSPP
ESFALRDDFRLFTRFVKDGKCTVNFPQNNAQLLISDCPPDRLKTFLKTLSIKHEASRGSN
PVSERARMRAGVPRSFEIISPVQQKDIQKANELRSKVNAPVQVKALTERAVNRTDGRQQL
KRPRADGDTSLVKTLHPHKKPVLTLPVAQKLSKEQMAVLNAVLSGKNVFFTGSAGTGKSF
LLKRIVGSLPPKSTYATASTGVAACHIGGTTLHSFAGIGSGSAPLDQCLELAQRPGVLQH
WTSCKHLIIDEISMVDAEFFDKLESIARSIRRSTEPFGGIQLIVCGDFLQLPPVTKGKEK
PSFCFQGRSWRKCIHVNMELTEVRRQTDRTFISLLQAVRVGRVTEEVTARLLRSASNPIE
RDGIVATRLCTHKDDVELTNENKLQQLPGPLRVFQALDSDPVLVKTIDAQSPVGHTLQLK
VGAQVMLTKNLDVQRGLVNGARGVVVDFLPGNQGLPRVRFLCGAVEVMKRERWTFKAAGG
VYLSRQQLPLKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVLDF
DPRVVQANADVLMFYKKLKRDRLLLQSSMNDFVGKSNKENQIW
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaggtggaggatggggcgagactggagtgcagtgttgcagtggagcgtgtgagt
ggagcatcagcaggtcatgcgttacagcggcgggttctccgccgtgctgcggtcactctg
ggccgggacgagttccgtgagctggtgctgcgcgttcaggacgtccgtggttccccccct
gagagctttgctttacgtgatgacttccgtctcttcacacgctttgtcaaggatggaaag
tgtacggtgaactttccacagaataatgcacagctcctgatctctgactgtccccctgac
cgcctgaaaaccttcctgaagaccctgagtataaaacatgaagcgtcacggggaagtaac
ccagtcagtgaaagggccaggatgagggcgggggtgccgaggagcttcgagatcatcagc
cctgtgcagcagaaagacatccagaaggccaacgagttgaggagtaaagtgaacgccccg
gtgcaggtcaaagctctgactgagagagctgtgaacaggacagacggccgacagcagctc
aaacgaccccgagcggatggagacaccagcctggttaaaactcttcatcctcataagaag
cctgtcctcacgttgccagttgctcaaaaactcagcaaagagcagatggcggttctgaat
gcagtgttgagtgggaagaatgtgttttttactggaagtgcaggtacggggaagtctttc
ctgctgaaacggattgtgggatcgctgcctcctaaaagcacctacgccacggccagtaca
ggtgtagctgcctgtcatataggagggacgacattacacagtttcgcaggtattggttct
ggttccgctcctctggatcagtgtttggagctcgcacagcggcccggagtcctgcagcac
tggaccagctgcaaacacctcattatcgacgagatctccatggtggacgcagagttcttt
gacaagctggaatccatcgccaggtcgattagaagatccaccgagccgttcggaggaatt
cagctgatcgtgtgtggagattttctccagcttcctcctgtgactaaaggaaaagagaaa
cccagcttctgcttccaggggaggagctggcggaagtgcatccatgtgaacatggagctg
actgaggtacgcaggcagacggaccgcaccttcatctcgctgctgcaggctgtacgagtg
ggcagagtcactgaggaagtcactgcccggctcctgaggagcgccagcaaccccatcgag
cgggatggtatcgtagcgaccaggctgtgcacacacaaggacgacgtggagctcactaac
gagaacaaactccagcagctgccaggacccttgcgtgtgttccaggctctggacagtgac
cccgtgttggtcaaaaccatcgatgcacaaagtccagtgggccacacgttacagctgaaa
gtgggcgctcaggttatgctgaccaagaacctggatgtacagagaggcctggtgaacggt
gcgagaggcgtcgtggttgactttctaccaggaaatcaaggtctcccaagagtgcgcttc
ctgtgcggcgctgtggaagtgatgaagcgcgagcgctggacgtttaaggcggctgggggc
gtgtacctgagtcgccagcagctcccgttaaagctggcctgggccatctccatccacaag
agtcaaggcatgactctggactgcgtggagatctctctggctcgtgtgttcgagagcgga
caggcgtacgtcgcgctgtctcgagctcgcagtctggagggtctccgtgtcctggacttc
gacccgcgagtggtccaggccaacgctgacgtcctgatgttctataagaagctgaagcga
gatcgactcctcctgcagtcctccatgaatgactttgttgggaaaagcaacaaggagaat
caaatctggtga
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