KEGG   Silurus meridionalis (southern catfish): 124402809
Entry
124402809         CDS       T08004                                 
Symbol
trim59
Name
(RefSeq) tripartite motif-containing protein 59
  KO
K12028  tripartite motif-containing protein 59
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smeo04121]
    124402809 (trim59)
Ubiquitin system [BR:smeo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    124402809 (trim59)
SSDB
Motif
Pfam: zf-B_box zf-RING_UBOX zf-C3HC4_2 zf-C3HC4 RING_XB3-XBAT31 zf-RING_2 zf-RING_5 zf-C3HC4_4 zf-C3HC4_3 Yuri_gagarin zf-RING_11 Med2 Peripla_BP_7 DUF4183
Other DBs
NCBI-GeneID: 124402809
NCBI-ProteinID: XP_046732029
LinkDB
Position
20:complement(14917746..14921604)
AA seq 421 aa
MENLEEDLTCSVCYSLFNDPRVLPCSHTFCKVCLDNVLQLSTNFSIWRPLRLPLKCPNCR
SIVELPPNGVEALPLNVCLRAIIEKYQRDNEPRAPSCPEHHRQPLNVYCVQDCKLICGLC
LTIGQHQGHTIDDLQTAYVKERDAPAKLVELLTDRRWEEVCGLVEKLEQEKIRHEGLIRQ
DREAVTEFFHGLQRLLEHKKEAFMKVLDRANEQLACTYKPLIEKLKDMKEEQLELISIIS
GISDDESALVFLEKMHHLRERVSTLTQTELPEVPTLHISPRLEDFFQEYWADVTVGRLDD
GPVPKISCHVKTHSTKETKPRLFQIETVRSMTGLVFLMVLLFLLLFWLNTFNGVLQYSNL
SQIRQAVTGLAHKLYLPLQDSGTFLYCLLHDLRLKLNLYLSAVGESTSQYMAFFSKTLRL
W
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggagaacctggaggaggatttgacatgctccgtttgttattcgctctttaacgatcca
cgagtgcttccctgctcccacaccttctgcaaagtttgtctggacaacgtgctccagctc
tccactaatttctccatctggcgcccactccgccttccgctcaagtgccctaattgccgt
agcattgtggaactgccgcccaacggcgtggaagctctgccgctcaacgtctgtctgcgt
gctattatagaaaagtaccagcgcgacaacgagccgcgggcgccttcctgccccgagcac
catcgccagcctctgaatgtctactgcgttcaggactgcaagctcatctgcggcctgtgc
ctcactattggccagcatcaaggccacaccattgatgatctgcagacggcgtacgtgaag
gagcgtgacgccccggcgaaactagtcgagctgctcacggaccggcgctgggaagaagtc
tgtggcttggtggagaagttagaacaggaaaaaattcgacacgaaggtctgatcaggcaa
gaccgtgaagctgttacagagttttttcatgggttgcagagactcctagagcacaagaaa
gaggcgtttatgaaggttctggacagagccaacgagcagctcgcctgcacttataaacca
ctgatcgagaagcttaaagatatgaaggaggagcagctagagcttatctcaatcatctcg
ggcatcagtgatgatgagtcagcccttgtgttcctggagaagatgcatcatttgagggaa
agggttagcactttgacccagacggagctacccgaagtccccacgctccacatttcaccc
cgcttagaggacttcttccaggaatattgggctgacgtgactgttggaaggctggacgat
ggtccagttccaaaaatctcctgtcacgtgaagacacattccaccaaagagacaaagcca
agactatttcagattgagacggtcagatctatgaccggtttggtttttctaatggtgctg
ctgtttcttttgcttttttggttaaatacattcaatggtgttctccagtactccaatctc
tcacagatcagacaagcagtaacgggtcttgctcataaactctatttaccgctacaagat
tcagggacgtttctgtactgcctgcttcatgacctgaggttaaaattgaatttgtatcta
tcagctgtaggagagagcacttctcagtacatggccttcttttcaaaaacgttacggtta
tggtaa

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