Silurus meridionalis (southern catfish): 124402841
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Entry
124402841 CDS
T08004
Symbol
tfr1a
Name
(RefSeq) transferrin receptor 1a
KO
K06503
transferrin receptor
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
smeo04145
Phagosome
smeo04216
Ferroptosis
smeo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124402841 (tfr1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124402841 (tfr1a)
04145 Phagosome
124402841 (tfr1a)
09143 Cell growth and death
04216 Ferroptosis
124402841 (tfr1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124402841 (tfr1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124402841 (tfr1a)
04090 CD molecules [BR:
smeo04090
]
124402841 (tfr1a)
Peptidases and inhibitors [BR:
smeo01002
]
Metallo peptidases
Family M28: aminopeptidase Y family
124402841 (tfr1a)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124402841 (tfr1a)
Exosomal proteins of colorectal cancer cells
124402841 (tfr1a)
CD molecules [BR:
smeo04090
]
Proteins
124402841 (tfr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFR_dimer
Peptidase_M28
PA
PPR_3
DUF3349
Motif
Other DBs
NCBI-GeneID:
124402841
NCBI-ProteinID:
XP_046732092
LinkDB
All DBs
Position
20:2260169..2275312
Genome browser
AA seq
776 aa
AA seq
DB search
MDQARTTITKIFNGTEGTYTRFLTQNMEEDSSHVEMKLSSDVDEEVEGNGVADHGKHHHA
RPAYVSKPGLCNPRNIFIAVTVAILISFLIGLLIGSNMYKRSTEEASSSCKTSFFTPSSA
PSDDEAIPIETVPSLDWSDIMALLKRKLTTSGIETSLREFSSDSHQAGSAGDEILANKVL
TKFKDNGMEPWLDTHYVKVQDRPASGVNKVTFRGNTFSEPGYLSYSATGTVQGALLYAYY
GQEDDLRRLQDIGIDMSERVLLIRAGKISYAEKVANAAKVNASAVLIYPDPADYPFAENV
DLLGHVHLGSGDPYTPGFPSFNHTQFPPAKSSGLPSIPAQTIRASTAAAIMREMEGRSPP
HGWGNGGLQDYKLGSTNDIVSVEVNNLLTEIQIHNVFGVVKGFIDPDRYVVIGAQRDAWG
AGFAKSTVGTSLLLELARVISSMVHEDGFKPRRSIVFASWSAGEYGAVGATEWLEGYLPS
LNMKAFSYISLDGVVAGSGNFKASASPLMYDLIQSTSKEVSSPTDPSRTIFALAGSNFET
NVMEPMRMDDPAYPFLTFSGIPSVSFRFTQDKPYPFFGTLLDTRRNLESKASNVPALIKS
AGEVAGQMALRLVHDHLLRLNTEKYLNIMRLQVSKINKEVMSLQRSGRLPKTLQMKWLMS
ALGSYGRASRNLISTIQNSDLEDIEQCRIINDRIMGVERDLLSPYVSPMETPFRHILLGS
GWCTVQDVLTQLAVIREGVVSANTDLLKNQFALTTWTIQSCANALAGNVWDMDNEI
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagccaggacgactataacaaaaattttcaatgggacggagggcacctacacg
cgattcctgacccagaacatggaagaagactccagtcatgtggagatgaagctttcgtct
gatgtggacgaggaggtcgaagggaacggagtggctgatcatggaaaacaccatcacgct
cggccggcctacgtcagcaagcctggcctgtgcaaccccagaaacatcttcatagctgtg
accgtggctattcttataagctttctgattggacttttgatcggctctaatatgtataaa
agatcgactgaagaggcttcaagctcttgcaagacttctttttttaccccttcctctgct
ccgtctgatgacgaggcgattccgatcgaaacggttcccagtcttgactggagcgacatc
atggctttgctgaaacgcaaactgaccacaagtggcattgaaaccagcctcagggagttc
tccagcgacagtcatcaagcaggatccgcaggagacgagatacttgccaataaagtctta
accaaattcaaggataacggaatggagccctggctcgatacacactatgttaaggtccag
gatcgtcctgctagtggggtgaacaaagtgacgttccgtggcaatacgttttccgaacct
ggctatttgtcctacagcgcaacgggaacggtgcagggtgcacttttgtacgcctattat
ggacaagaagacgacttgagacgcctgcaagacatcggcattgacatgtctgaaagagtc
ctcttgatccgggcaggaaaaattagttatgctgagaaggttgctaatgctgccaaagtg
aacgccagtgcagtgctgatctaccccgaccctgctgattacccgtttgccgaaaacgtt
gacttgcttggccacgtccatctgggctctggtgatccgtacactccaggtttcccatct
tttaaccacactcagtttcctcctgctaaatcctcaggcctgccaagcatacctgcccag
accatccgcgccagtacagctgcagcgatcatgagggaaatggaaggtcgtagtcctcct
catggatggggtaatggaggtctgcaagattacaagctcggtagtactaacgacattgtc
tccgtggaggtcaacaatcttctcactgaaatacagatccataatgtgtttggagtcgtt
aagggtttcatagatccagatcgttatgtggtgattggagctcagagagacgcctggggt
gctggatttgccaagtccacagtcggcactagcttactgctcgagttagcccgagttatt
agcagcatggtacatgaagatggattcaaacccaggaggagcatcgtgtttgccagttgg
agtgctggagaatacggcgctgttggtgctacagagtggcttgagggttatttgccttct
ttgaacatgaaagccttttcctacatcagcctggatggagttgttgcaggttctggaaac
ttcaaagcaagtgcaagcccgctgatgtatgacctgatccagagtacttcaaaagaggtt
tcttcacccactgaccccagcagaactatattcgcactggctggatcgaactttgagaca
aatgtgatggagccgatgaggatggatgatcctgcctatccgttcctgactttctcgggc
atcccttctgtctctttccgattcactcaggataaaccatacccattctttggtactttg
ctggataccaggagaaatctggagagtaaagcatcgaacgtacccgcactgataaagtcg
gcaggcgaggtggcgggtcagatggcgcttcggctggtacacgatcatctgctgagactg
aatacggaaaagtacctcaacatcatgcgcttacaagtgagcaaaatcaacaaggaagtg
atgagcctgcaaaggagtggtcgccttccaaagactctccagatgaagtggctgatgtca
gcgttgggttcgtacggtcgtgcctccaggaacctgatcagcacaatccagaatagcgac
ctcgaagacatcgagcagtgtcgcatcattaatgaccggatcatgggggtggaaagggat
ctgctgtctccgtacgtctctcccatggaaacaccgttcagacacatattgcttggctcg
ggatggtgcaccgttcaagacgtcctcacacaactggccgtgatcagagaaggcgtagtc
agcgccaacaccgacctgctgaagaatcagttcgctctgaccacctggacgatccaaagc
tgcgccaatgcactcgctgggaacgtatgggacatggacaatgagatttag
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