KEGG   Silurus meridionalis (southern catfish): 124402876
Entry
124402876         CDS       T08004                                 
Symbol
kdm4ab
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smeo03036]
    124402876 (kdm4ab)
Enzymes [BR:smeo01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     124402876 (kdm4ab)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     124402876 (kdm4ab)
Chromosome and associated proteins [BR:smeo03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    124402876 (kdm4ab)
SSDB
Motif
Pfam: JmjC Tudor_2 zf-HC5HC2H_2 PHD_2 JmjN zf-HC5HC2H PHD PHD_4 Tudor_5 PTM_DIR17_Tudor
Other DBs
NCBI-GeneID: 124402876
NCBI-ProteinID: XP_046732187
LinkDB
Position
20:1178160..1194350
AA seq 1042 aa
MACDSSSFSSKGIMTFYPTMEEFKSFSRYIAYMESKGAHRAGLAKIVPPKEWKPRRSYDD
IDDLLIPAPIQQVVTGQSGLFTQYNIQKKPMTVKEFRKTANSDKFCSPRYDDFEELERKY
WKNVTFNPPIYGADVNGTLYDPGVDEWNVGHLNTILDTVEHDSGITIEGVNTPYLYFGMW
KTTFAWHTEDMDLYSINYLHFGEPKSWYTVPPEHGKRLERLAKGFFPGSSQNCEAFLRHK
MTLISPSILKKYGIPFEKITQEAGEFMVTFPYGYHAGFNHGFNCAESTNFATQRWIDYGK
QAILCSCRKDMVKISMDVFVRKYQPERYELWLAGKDSAPIDHTKPTPEAAEFMGGKKGDF
GHREPCTQKLSSDSKKSVAKQRIGTKRHRVCLEVPDDVLPKSEEQNGDSVYGKKGRLSPQ
PELSSDTSDCSSRSRVKPPRSESCVKSETADVTSAPESPQAQRKSHLYIATVPMAPHCLS
ALPWTSSKPGVASLLFHRTLSPSDALQVHTYAAKATLCKPQYPKFQDFMNSDSESEPTPE
LKHSVDTPEHSVDTPEHSVDTHEDETEDEKENKSMKRMLQPLSNLPQLHPLLRDSSSDEE
LQEQVEIDVDCQESDPWAELLRPLWQKRILRSFKVEREFNRRLGLQAPYCAVCSLFHTYE
QSDLNTLIQGTSVSSGEDNIRTKPLIPEMCFTGSSDGQLSTPNLDEDGTSPLVSCTVCSV
RVHTSCYGVPRGSSLDGWRCSRCEANAFTQDCCLCSLRGGALQRANNDKWVHVFCAVAVL
EARFVNIPERRPVDLSAIPLQRFKLKCHYCRKQMKKASGCCVQCSHGRCSSSFHPTCAQA
VGVHLHPDDWPFVVFFTCWRHKGGTNIERNKASLRELVTGQKVICKHKNGRYYHCEVVEL
TKATFYEVVFDDGSFSDNLFPEDIVNRDCVRLGPPAEGAVVQVRWTDGLIYGAKFVAAHV
IPMYQLEFEDESQLTVKREEVYCLDEELPKRVKARLSVASDMRFKGVFVEKEVKQDSKRQ
RFINSRYREDYIEPSVYRAIME
NT seq 3129 nt   +upstreamnt  +downstreamnt
atggcgtgcgactcatcctccttctcctccaaggggatcatgaccttttacccgaccatg
gaggagttcaagagcttcagccgctacatcgcttacatggagtctaagggagcgcacaga
gccggtctggccaagatcgttcctccaaaggagtggaagcccagacgctcgtacgacgac
atcgatgacctgttgatcccagcgccgattcagcaggtggtgacgggtcaatctggactc
ttcactcagtacaacatccagaagaaacccatgactgtgaaggagttccgcaaaaccgcc
aacagcgacaagttctgcagtccacgatacgatgactttgaagagctcgagaggaaatac
tggaagaacgtcactttcaaccctcccatctatggagccgacgttaacggaactctgtac
gaccctggtgtggatgagtggaacgtgggccatttgaacaccatcctggacactgtggag
cacgacagcggcatcaccatcgagggggtgaacacgccgtacctgtactttggcatgtgg
aagacgacgttcgcctggcacacagaggacatggatctctacagcatcaattaccttcac
ttcggggaacccaagtcgtggtacactgttcctccggagcacgggaagagattagagcgt
ctggctaaaggattttttcctggaagttctcaaaactgcgaagcttttctccgacacaag
atgaccctgatctctccctctattttgaagaaatatggcatcccttttgaaaaaatcact
caggaagccggagagttcatggtgacgttcccgtatggatatcacgccgggttcaatcac
gggtttaattgcgcggagtcgaccaacttcgccacgcagcggtggatcgattacggaaag
caggccattctgtgttcatgtcggaaggacatggtgaagatctctatggacgtgtttgtg
aggaagtatcagcccgagcgttacgagttgtggctggcggggaaggacagcgcgcccatc
gatcacaccaaacccactccagaggcggcagagttcatgggaggcaagaaaggagacttc
ggtcacagagaaccgtgtacgcagaagctgagcagcgactccaaaaaaagtgtggccaaa
cagaggatcggtactaagaggcaccgtgtgtgtttggaggtaccggatgatgttctgcca
aagagtgaggagcagaatggcgactctgtttatgggaagaagggacgtctctctccacag
ccggagctgagctcagacacttccgactgcagcagtcggtcgcgtgtaaaacctcctcgt
tctgagagctgcgttaaatcggagactgctgatgtaacctcggccccggagtctcctcag
gcccaaagaaaaagccatctgtacatcgccaccgtccccatggccccgcactgcctctcc
gctctgccctggacgtccagcaagcccggggtcgccagcctgctctttcaccggaccctg
agtccctctgacgccctgcaggttcacacctacgccgctaaagccacactctgtaaaccc
caatatcccaaattccaagacttcatgaactccgactccgagtcagaacccacacctgag
ctgaaacacagcgtagatactccagaacacagcgtagacactccagaacacagcgtagac
acacatgaggatgaaacggaggatgagaaagagaacaagagcatgaagaggatgctgcaa
cccctcagcaatctgccacagcttcacccgctgctcagagacagctccagtgatgaagag
ttgcaggagcaggtggagatcgatgtggactgtcaggaatcggacccctgggctgagcta
ctcagacccctgtggcagaaacggatattgcgcagctttaaggtggagcgcgagtttaac
cggcgtttgggtctccaggctccatactgtgccgtgtgcagcctcttccacacgtacgag
cagagtgatttgaacactctgatccagggaacgtcggtgtctagtggagaggacaacatt
aggacgaagcctctgatcccggagatgtgcttcacgggaagttctgacggacagctgtcc
actccgaacctggatgaggatggaaccagtcctctggtcagctgtacggtgtgctccgtt
cgcgttcacaccagttgttacggagttcctcgaggcagcagtctggatggatggaggtgt
tcacgctgtgaagccaatgcttttactcaggactgctgtttgtgttctttacgaggagga
gcattgcagagagccaacaacgacaagtgggtgcatgtgttctgtgcagtagctgttttg
gaggccaggtttgtgaacatccccgagcgcaggccggtagatctgagtgctataccgcta
cagagatttaaactgaagtgtcattactgtcggaagcagatgaagaaggcgtctggttgc
tgtgttcagtgctcccatggccgctgctcgtcctccttccaccccacgtgtgctcaggcg
gtcggcgttcacctgcaccccgacgactggcccttcgtcgtcttcttcacctgctggaga
cacaaaggaggcacaaacatcgagcgtaacaaggcgtctctgcgagaactggtgacgggg
cagaaggttatatgcaagcacaagaacggccgctattaccattgcgaggtggtggagctc
accaaggctacgttctacgaggtggtgttcgacgacggctccttcagcgacaaccttttc
cctgaggacatcgtgaacagagactgtgtgagactcgggcctccagcagagggcgctgtg
gtgcaggtgcgctggacagacgggctgatctatggtgccaagttcgtcgcagctcatgtc
atccccatgtaccagttggagttcgaggacgagtctcagctgacggtaaaacgtgaagaa
gtgtattgtctggacgaggagcttcccaaacgtgtcaaggcaagactgtccgtggcgtca
gacatgcgctttaaaggagtctttgtggagaaggaggtcaaacaggactctaaaagacag
cgctttataaactcccgctacagagaggactatatcgagccttcagtctacagagccatc
atggagtaa

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