Silurus meridionalis (southern catfish): 124402881
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Entry
124402881 CDS
T08004
Symbol
kirrel1b
Name
(RefSeq) kin of IRRE-like protein 1b isoform X1
KO
K25874
Kirrel/Neph family protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124402881 (kirrel1b)
Cell adhesion molecules [BR:
smeo04515
]
Immunoglobulin superfamily
Kirrel/Neph family
124402881 (kirrel1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
Ig_4
Ig_5
Ig_6
Stevor
Motif
Other DBs
NCBI-GeneID:
124402881
NCBI-ProteinID:
XP_046732196
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All DBs
Position
20:complement(10292560..10352505)
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AA seq
798 aa
AA seq
DB search
MAWFYILTLAVGVHVNKVLAGPRFSQEPADQSVVLGERVVLSCVVFNYTGIVQWTKDGLA
LGIGEDLRAWPRYRVLRIIDVGQYNLEISSAELSDDSLYECQATEAALRSRRAKLTVLIP
PDDPVIEGAPEILLTAGISYNLTCVSRGAKPLSTIEWYKDGALVEGAHTSTEVLPDRKRV
TTRSFLPIQPVDTDTGHNFTCVASNLAVPLGKRASVTLNVHHAPTVLLSIEPRSVLEGER
VTFTCQATANPPIMGYRWAKGGVILEGARESVFVTTADHSFFTEPVSCQVFNAVGSTNVS
ILVDVHFGPILVVEPRPVTVDVDSDVTLNCKWAGNPPLTLTWTKKGSSMVLSNNNQLYLK
SVSQADAGQYVCKAIVPRIGVGETEVTLTVNGPPIISSEPVQYAVRGEKGEIKCYIASTP
PPDKIVWAWKENVWEKDRGTLSERYTVEQSKPASEGGAVLSTLTINNVIESDFQSTYNCT
AWNSFGPGTMIITLAETDIVPVGIIAGGTVGSSILLIVFLLALAFYLYRQRKASRRGVAL
KPDIKVETVNKETPSLEEDTPGVSTASRMVKTLHSFLPSVSLSPSTQPFKEDTELKQETR
TETQETKEEYELKDPTNGYYNVRATTHDEGRSAARYQEFRPPNPASVSTSAAGSAPGINP
APIGRYEPRPPSRITHNTYAQFSTIARTKQSQGPPKAALQTTDYSRECGLLESTNPLTYD
TYGYQTSAQYAQYRLGFAPPLEEGPAYEMYPKGQGVGPNQGVGPEAGLGKYGSSTRFSYS
SPPTEYSQRHTQRMQTHV
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcatggttttacatcttaactttggccgtcggtgttcacgtgaacaaagtgctggct
gggccacgcttctctcaggagccggcagatcagtctgtggtgttgggggagagggttgtg
ctctcctgtgtggtgtttaactacacaggcatcgtccagtggaccaaagatggacttgca
cttggcattggagaggacctgagggcatggccacgttatcgtgtattaaggatcattgat
gtcggtcagtataacctggagatttcgtctgctgagctgtcagatgattctctgtatgag
tgtcaagccactgaagcggctctccgatccagaagagccaaactcactgtcctcattccc
ccggatgatccagtgatagaaggagcaccagagattttgctaacagcgggaatctcgtac
aacctgacatgtgtgtcccggggagccaagcctctttccaccatagagtggtacaaagat
ggagctttagtggaaggagctcatactagcactgaggttttacctgacagaaagcgagta
actacacgcagtttcctgccaattcagccagtagacacagacactggacacaacttcact
tgtgttgcctccaatcttgcagtgccactgggcaaacgagccagtgttacactcaatgtg
caccatgctcccacagtattattatcgattgagcctcgttcagttcttgagggagagaga
gtaacatttacatgccaagctacagccaaccctcctatcatgggctacaggtgggctaaa
ggtggagtaatcctggagggagcaagggagagtgtgttcgtgactacagccgatcactca
ttcttcactgagcctgtttcctgccaggtgttcaacgctgtgggcagcaccaacgtcagc
atattggtggacgttcactttggtccaatcctggtagtggaaccgaggcctgtaacagtg
gatgtggactctgatgtaacactgaactgtaaatgggcaggaaatcctccacttacactc
acctggacgaaaaagggctccagtatggttctcagtaacaataatcagttgtatttaaag
tcggtgagtcaggctgatgcaggacagtatgtgtgtaaagccatcgtacccaggattggg
gttggtgagacagaggtcaccctgacagtcaatggtccaccaattatttcaagcgaacca
gttcagtatgctgtaagaggtgagaagggtgagatcaaatgctacattgcgagcacacct
cctcctgacaaaattgtatgggcctggaaggagaatgtgtgggagaaggatagaggcact
ctgtcagagaggtacacagtagagcagagcaagcctgcatcagaagggggagctgtactc
tccaccctcaccatcaataatgttatagaatcagactttcaatccacatacaactgcaca
gcctggaactcatttggaccaggcaccatgatcatcacactggcggagacagatattgtc
cctgtgggtataatagctggtggaacagtcggatcttccatcctgctaattgtcttcttg
cttgcactggccttctacctctaccgccagcgaaaagccagtcgtcggggggttgcattg
aagcctgacatcaaggtcgagacagtcaacaaggagacaccaagtctagaggaagataca
ccaggtgtctctacagcatcacgcatggtaaagacattgcactcttttcttccctctgtc
tccctctctccctccactcagcctttcaaagaggacacggagctgaagcaggaaacacgc
actgaaacacaggagaccaaggaggagtatgagctgaaggacccaacaaatggttactac
aatgtgcgagcgacaacccacgatgaagggcgttccgcagcccgctaccaagaattccgc
ccaccaaatccagcctcagtctccacttctgcagcaggctcagcacccggaataaatccc
gctcccattggccgctatgaaccacgccctccatctcggatcacccacaatacctatgcc
cagttcagcaccattgccaggaccaaacaaagccagggtccaccaaaagcagcacttcag
acaacagactattccagagaatgtggcctcttagaatcaaccaatccgcttacatatgac
acatatggataccaaacatctgcgcaatacgctcagtacaggcttggctttgctccgccg
cttgaagaaggaccagcgtatgagatgtatccaaaaggacagggggtggggccaaaccaa
ggagtagggccagaagctggactggggaagtacgggagctcaacccgtttctcttattca
tctccacccacagaatactctcaaagacacacgcagaggatgcagacacatgtatga
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