Silurus meridionalis (southern catfish): 124402884
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Entry
124402884 CDS
T08004
Symbol
arhgef2
Name
(RefSeq) rho guanine nucleotide exchange factor 2 isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124402884 (arhgef2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124402884 (arhgef2)
Membrane trafficking [BR:
smeo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124402884 (arhgef2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH
C1_1
SOS1_NGEF_PH
C1_2
Prok-RING_1
Pinin_SDK_N
PH_13
CM_2
PHDvar_NSD
PHD
BRISC_FAM175B_helical
Motif
Other DBs
NCBI-GeneID:
124402884
NCBI-ProteinID:
XP_046732204
LinkDB
All DBs
Position
20:16150054..16211917
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AA seq
1169 aa
AA seq
DB search
MYTMISTSQHHRIRISDSGVPPGGSPGPPPVSPISPLSRCLPRSSPSPRMRKLMLTLPLT
GHMVRVTCNRRHSWHPGVVQCSHPQCGQRSVSLEALDPVEMETVRCGSLQKRDPRRAPIT
DYTEDLESLLSLNEEEEGSDSQIFPFTEVQSPLKSHSMSVPSLCVMSRENHPSLAKQRPH
SHAQAHSSLSSLLGGSTQSLQVDAELGSEFWDNEETTEGQGLHNEESEKPNGLRSLVRSL
SFLGKMARNYKNKEKERMKEREKEAREREARYSNGHLFTSLTVSATTLCSACNKSITAKE
ALSCPTCNVTIHNRCRDTLANCAKMKQKQQKLALGRNSSALQNVALRTKTPIIKERPSSA
IYPSDSLRQSLLGSRRGRSTLSLSKSVSTNNIAGNLNDDSPLGLRRILSQSTDSLNFRNR
AMSMESLNDDGEVYYASMLEDLEREGRDFEADSWSLAVDSSYLQTHRKDVIKRQDVIYEL
IQTELHHVRTLRIMEGVFRRGMLEEVLLEPGVVHAVFPCLDQLVALHSRFVSQLLSRRNH
SLASGSNTNFTIQQLGDVLVDQFSGQNADEMRKCYAEFCSRHLKAVKLYKELLARDKRFQ
NFIRRVSRGSLLRRHGVQECILLVTQRITKYPVLIQRILDNTKGSEEEAESLSQALVLIR
ELLSSVDQQVQELELTQKLQEIRARLDPRAETEVRGGGVFRGGELLRRRLLHEGTLLLKP
AQGSRLKDVQVLLMTDILVFVQEKDQKYFFPCLDKPSVLSLQNLIVRDIANQERGMFLIS
DSTPPEMYELHASSKDDRNNWMKIIQQAVSRCPSREDFPLIETEDKALLRRLRADIQQKD
REVLELLQERVTLFSDLAEVTSGQEVKMPTSSRNVFRADTPHAPQAEKLLNNAIAEVDRL
SELLLGSSIGLPRSCSSSSDQNHTKAPMSNGETISVNGSHDGNSPLQKQDRNGNQLQDRT
PNEEVCQRLVNLSTHLHALQAAVIGQDSILELCMRDGSTSTSCSTPSTSTPSPLGSAPLR
LSRSLSRDALMEGVLPGAGADQALLQRHYALLHDEVCRLRPLEARLRESERARTQAEEQL
RELQGTHRRDSTDTTSSQRRGSDAPLAPLACQEADQLDGVQEGSEEDDSEEEEEVRISPR
SDSPRDLQDIPEESECITEAPDGDSSGHS
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgtacacgatgatcagtacttcgcagcaccacaggatccgtatctcagactcgggtgtg
cctccaggaggctccccgggacctccgccggtgtcacctatctcacccctatcacgctgc
ctgccccgaagctcaccatctccacgcatgaggaagctgatgctgactctgccgctcacg
ggtcacatggttcgggtcacgtgcaatcgcagacacagctggcatcccggcgtggtgcag
tgtagccacccgcagtgtggacagcgcagtgtaagtctggaggctctggaccctgtggag
atggagacggttcggtgtggcagtctgcaaaagcgagaccctcgtcgagcccccatcact
gactacactgaggatctcgagtccctgctgtcactcaatgaagaggaggagggatcagac
tcacagatcttccctttcactgaggtgcagtcccccctgaagagccacagtatgtctgtc
ccatcactttgtgtcatgtcacgtgaaaaccatccgtctcttgccaaacagcgtcctcac
tctcacgcccaagcccactcttccctttcctctttacttggagggtctacacagagcctt
caagtggatgcagagctcggcagtgagttttgggacaacgaggagacgacggagggccag
gggcttcacaacgaggagagcgagaagccgaacggtttgcgctccctggtccggagtctc
agcttcttgggaaagatggcaaggaattacaagaacaaagagaaggagcgcatgaaggag
cgggagaaggaggcgcgtgaaagagaagcacgctacagcaatggtcatctcttcacctct
ctgaccgtgtcggccaccacgctctgctcggcatgcaacaagagcatcacagccaaggag
gcactcagctgccccacttgcaacgtcacgatccacaaccgctgccgagacacgctggcc
aactgcgccaaaatgaagcagaagcagcagaagttggcgctggggcggaacagttcagct
cttcagaacgtggccctacgcaccaaaactcccatcattaaggagaggccgagttcagct
atttacccctccgacagcctgcgccagtctctcctcggttctcggcgaggacggtccacc
ctctccctcagcaaaagcgtctccaccaacaacatcgcagggaatctgaacgatgactct
cctctgggactgagacgaatcctctctcagtcaaccgactcgctgaacttcaggaacagg
gccatgtccatggagtctctaaacgatgacggggaggtgtattacgcctcgatgctggag
gatttggagagggagggccgcgacttcgaagcggattcgtggagtttagcggtggattca
tcctacctgcagactcaccgcaaagacgtcatcaagaggcaagacgtcatctacgagctg
atccagacggagcttcaccacgtgcgcacgctgcgcatcatggagggcgtgtttcggcgc
ggcatgctggaggaggtcctgctcgagccaggcgtcgtgcacgccgtctttccgtgcctc
gaccagctggtggcgctgcattcccgcttcgtcagccagctgctgagccgacggaaccac
agcctggcgtcagggagcaacaccaacttcaccatccagcagctcggagacgtgctggtc
gatcagttttcaggccagaacgcagacgagatgcgcaagtgctacgccgaattctgtagc
cggcacctcaaagccgtgaagctctacaaggagctgctcgcacgggacaagaggttccaa
aactttatccggcgagtgagtagaggatcactactccgccgacacggggtccaagaatgc
atcctgctggtcacgcaacgcatcaccaaatacccagtgctgattcagcgcatactagac
aacacaaaagggagcgaggaggaagccgagtctctgagtcaggctctagtgctgatccgt
gagctcctgagctctgttgatcagcaagttcaggagctggagctgacgcagaagctgcag
gagatccgggctcgcctggacccacgtgccgagaccgaagtaaggggtggaggagtattc
cgaggcggagaattgctccggagaagactcctccacgagggaacactgctgttaaaacct
gcacagggctccagactcaaagacgtgcaggtcctgttgatgacggacatcctggtgttc
gtgcaggaaaaggaccagaaatattttttcccctgtctggacaagccgtcggttctgtcg
ctccagaacctgatcgtcagagatatagccaatcaggagcgagggatgttcctcatcagc
gactccacccctcctgagatgtacgagctgcacgcctcttccaaggatgaccggaacaac
tggatgaagatcatccagcaggccgtcagcagatgtccctctagagaagatttccctctg
atcgagacggaggacaaagcccttctgcgtcgactcagagctgatattcaacagaaagac
cgggaagtcctcgaactcctacaagagcgcgtgaccctgttttctgacctggcagaggtc
acaagcggacaagaggtcaagatgcccaccagctctcggaacgttttccgagcggacaca
ccgcacgcgccgcaggctgagaaactgctcaacaacgccatcgctgaagtggacagatta
agcgaactgctactgggctcgagcatcgggcttcctcggtcctgcagttccagcagtgac
cagaaccacacgaaggcgcccatgagcaacggagagacgatttcggtgaacggaagccat
gatgggaacagtcccttacaaaaacaggatagaaacggtaaccagctgcaggacagaact
cccaatgaggaagtttgccaaagacttgtaaacctcagcacgcatctccacgcactacag
gcagcggtgatcggacaggactccatcctggagctgtgcatgcgggacggttccacctct
acctcctgctccactccgtccacctcgacccccagcccgctcggctccgcccctctgcgc
ctgagccgctctctgtcacgtgacgccctgatggaaggcgtgttgcccggggcgggtgcg
gatcaggccctgctgcagagacactacgctctgctgcatgatgaagtgtgtcgtctgcgc
ccgttggaggcccggctgagggagagcgagcgggcgaggacgcaggcagaggaacagctg
agggagctgcagggcacacacagacgagacagcacagatacaacaagctcacagcggaga
ggaagtgacgcccccctcgccccactggcgtgccaggaagctgaccagttagatggcgtt
caggagggaagcgaggaagacgattccgaggaggaggaagaagttcggatttccccgcga
tcagacagtcccagagatctacaggacattccagaggaaagcgaatgcataaccgaagct
ccagacggcgactcttccggacacagttaa
DBGET
integrated database retrieval system
