KEGG   Silurus meridionalis (southern catfish): 124402905
Entry
124402905         CDS       T08004                                 
Name
(RefSeq) syntaxin-1A isoform X1
  KO
K04560  syntaxin 1A
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    124402905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smeo04131]
    124402905
Membrane trafficking [BR:smeo04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    124402905
SSDB
Motif
Pfam: Syntaxin SNARE Syntaxin_2 ATG17_like Ferritin DUF5856 PspA_IM30 Spectrin_Anc-1 GNVR Lzipper-MIP1 DUF848 Lge1 DUF4658 YtxH EcoEI_R_C PoNi_N FapA
Other DBs
NCBI-GeneID: 124402905
NCBI-ProteinID: XP_046732280
LinkDB
Position
20:complement(15429491..15509589)
AA seq 287 aa
MKDRTLELRHGKDTEEEEEVAVGMEKGFMDEFFEQVEEIRGFIDSLAEKVEEVKRKHSAI
LAAPNPDEKTKADLEELMTDIKKLANKVRSKLKSIQQTIEQEEGQNRSSADLRIRKTQHS
TLSRKFVEVMSEYNATQSSYRERCKGRIQRQLEITGRNTTNEELESMLESDNPAIFTSGI
IMDSNITQQAMNEIETRHNEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAV
DYVERAVSDTKKAVKYQSKARRKKILILICCVVLGIVIASTVGGLLA
NT seq 864 nt   +upstreamnt  +downstreamnt
atgaaggaccgcacgctcgagctgaggcatgggaaggacaccgaagaggaggaggaggtg
gcagtgggcatggagaaaggcttcatggatgagttctttgaacaggtagaagagatacgt
ggcttcatcgactcgctggctgagaaggtagaggaggtaaagcggaaacacagcgccatc
cttgccgcgccaaatccagacgaaaaaacaaaagcagatctggaggagctgatgacagac
atcaagaagctggctaacaaagtgcgctccaagttaaagagtatccagcagaccatcgag
caagaggaaggacagaacaggtcttcagcagatttgaggatacggaagacacaacactcc
actctgtcacgcaaattcgtggaggtgatgtcggagtacaatgcgacgcaatcgagttac
agggagcgctgcaagggccggatccagagacagttagagatcactggaaggaacacaaca
aacgaggagctggaaagcatgctggaaagtgacaacccagcgatcttcacttcggggatc
atcatggactccaacatcacccagcaggccatgaacgagatcgaaacccggcacaatgag
atcatcaagctggagaacagcatccgtgagcttcacgacatgttcatggacatggccatg
ctggtcgagagtcagggcgagatgatcgaccgtatagagtataacgtggagcacgcagtg
gattacgtggaaagggctgtgtcagacaccaagaaggcagtaaagtaccagagcaaagca
cggaggaagaaaatcttgattcttatttgctgtgtggtgctcgggatcgttatcgcttcc
accgtgggaggcttgttagcctga

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