Silurus meridionalis (southern catfish): 124402905
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Entry
124402905 CDS
T08004
Name
(RefSeq) syntaxin-1A isoform X1
KO
K04560
syntaxin 1A
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124402905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124402905
Membrane trafficking [BR:
smeo04131
]
SNARE
Syntaxin (Qa)
Stx-PM
124402905
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
ATG17_like
Ferritin
DUF5856
PspA_IM30
Spectrin_Anc-1
GNVR
Lzipper-MIP1
DUF848
Lge1
DUF4658
YtxH
EcoEI_R_C
PoNi_N
FapA
Motif
Other DBs
NCBI-GeneID:
124402905
NCBI-ProteinID:
XP_046732280
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Position
20:complement(15429491..15509589)
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AA seq
287 aa
AA seq
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MKDRTLELRHGKDTEEEEEVAVGMEKGFMDEFFEQVEEIRGFIDSLAEKVEEVKRKHSAI
LAAPNPDEKTKADLEELMTDIKKLANKVRSKLKSIQQTIEQEEGQNRSSADLRIRKTQHS
TLSRKFVEVMSEYNATQSSYRERCKGRIQRQLEITGRNTTNEELESMLESDNPAIFTSGI
IMDSNITQQAMNEIETRHNEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAV
DYVERAVSDTKKAVKYQSKARRKKILILICCVVLGIVIASTVGGLLA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgcacgctcgagctgaggcatgggaaggacaccgaagaggaggaggaggtg
gcagtgggcatggagaaaggcttcatggatgagttctttgaacaggtagaagagatacgt
ggcttcatcgactcgctggctgagaaggtagaggaggtaaagcggaaacacagcgccatc
cttgccgcgccaaatccagacgaaaaaacaaaagcagatctggaggagctgatgacagac
atcaagaagctggctaacaaagtgcgctccaagttaaagagtatccagcagaccatcgag
caagaggaaggacagaacaggtcttcagcagatttgaggatacggaagacacaacactcc
actctgtcacgcaaattcgtggaggtgatgtcggagtacaatgcgacgcaatcgagttac
agggagcgctgcaagggccggatccagagacagttagagatcactggaaggaacacaaca
aacgaggagctggaaagcatgctggaaagtgacaacccagcgatcttcacttcggggatc
atcatggactccaacatcacccagcaggccatgaacgagatcgaaacccggcacaatgag
atcatcaagctggagaacagcatccgtgagcttcacgacatgttcatggacatggccatg
ctggtcgagagtcagggcgagatgatcgaccgtatagagtataacgtggagcacgcagtg
gattacgtggaaagggctgtgtcagacaccaagaaggcagtaaagtaccagagcaaagca
cggaggaagaaaatcttgattcttatttgctgtgtggtgctcgggatcgttatcgcttcc
accgtgggaggcttgttagcctga
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