Silurus meridionalis (southern catfish): 124402915
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Entry
124402915 CDS
T08004
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124402915 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124402915 (vcpip1)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124402915 (vcpip1)
Peptidases and inhibitors [BR:
smeo01002
]
Cysteine peptidases
Family C64
124402915 (vcpip1)
Ubiquitin system [BR:
smeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
124402915 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
124402915
NCBI-ProteinID:
XP_046732297
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All DBs
Position
20:11609755..11620007
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AA seq
1114 aa
AA seq
DB search
MKMSSPQGSKKRDKRILSGICPDSKCHARLFFPAYSSVSIECTECGQRHEQKNLLNVEEV
TDPDVVLHNLLRNALLDVTGAPKKSTELVKVMGLSNYHCKLLSPILTRYGMDKQTGKAKL
LREINQGELFDCSLLGGRAFLIEQEHVSTVGYGKDRSGSLIYLHDTLEEIKKANNNKECL
IPVHVDGDGHCLVHAVSRALVGRELFWHALRENLKLSFKQNLDRYKALFQDFIDTVEWED
IINECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVP
EEQCRGKDGTLNKPICIAWSSSGRNHYLPLVGIKGMLLPKLPAALIPKAWGVPQELISRY
ISFEACGGCIIGGDRSLQEKYLLRLVSAMEEVFIEKHGIHPALVADVHQYFYRRTGVIGI
QPEDVTEAAKKMVKENRLYCCLICNALSELHVPSEWLVPGGKLYNLAKSTHGTLRGDKNY
TFPLNNLVCSYCPERDALVPDYKLSSLTTCTWCHRNSARHVRGDGSIVYIDGDRTNTRSQ
GGKCGCGFKHFWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYELDVALNSNVYNVAMC
LVTKHFPGEFGSEILVQKVVNTVLHHTAKKNPEEYHPVAIEGAHMQGQGQGGGKVVEWDA
NPPQKIILTGQKGRTLHKEELVMSQAERSLQHKISEQAALSQRRRTQHQRMQDQIAEPRP
ASPAPFSSAPPTPTKGLTPSGQKKIRVTTSDGRQATLQLQAHNTYAELQEAITEAFNLQP
HQQCIRHGFPPRELPPPPPEQQDQPVALQHGDRITVEVLKESVPDSQTDTHTPMEPWLSR
TSSRELEDGVDLEMSSLCLLATLMGEDVWSYAKKLPHLFQQGGVFYNIVKKDMGLLDGKH
CTLPHLTGKTFVFNAAEQRLELCVDAAGHFPVGPNVEEIIQETLSQLCSEASLHNRDGSP
AHGLKLGSGGVVRKKEQAVTAFQGKGHSLGSTSHEHPPIRREHSNGVDLSGSVQGEGLAR
AREELVRVAPGMLTLREGCRELELEPTAIEAQRHRLQEMVSNIQASMDKHLRQQTTPSTA
AKQDDKEEELDEQKDIKSQGADSPSISEPMDQSL
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtcgtcgccacaaggctcaaagaaaagggacaagcgaattttatcaggaatc
tgtccagattccaaatgtcatgcaagattgttcttccctgcttatagctcagttagcatt
gaatgcacggaatgtggccagcgtcatgaacagaagaatcttttaaatgtggaagaagta
accgaccctgatgttgtgcttcataatttactgagaaacgctttgctcgatgttactgga
gctcccaaaaaaagcacagaactggtcaaagtgatgggtctgtccaactaccactgcaag
ctgctgtcaccgattcttacccgttacggaatggacaaacagactggaaaagcgaaacta
ctacgggagataaatcaaggtgagctctttgactgttcgctgttaggtggccgagctttt
cttatagagcaggagcacgtatctacagttggctatggtaaggacagatctggcagcctc
atatacctccacgacacattggaggagataaagaaagccaacaacaacaaagaatgtctc
attcctgtgcatgtggatggagatggccattgcctagttcatgctgtgtccagggcttta
gtgggtcgtgagctgttttggcacgcgctgagagaaaaccttaagctcagttttaaacaa
aacctggatcgctataaggctctctttcaagactttattgacactgtagaatgggaggac
atcatcaacgagtgtgaccctttgttcgtgcctccggagggtgtccctcttggattgagg
aacatccatatttttggcttagccaatgtccttcaccgtcccataattctgctggactct
ctgagtggcatgaggagctcaggtgactactcggccacgtttctgccaggcttggtgccc
gaggagcaatgcaggggaaaggatggtaccctcaacaagcccatctgcattgcatggagc
agctcaggcaggaatcattatctccctctagtgggtattaaggggatgcttctcccaaaa
ctgcctgcagcactgatccccaaagcttggggagttccacaagaacttatcagtaggtat
atcagttttgaagcctgtggaggctgcattattgggggagatcgaagcttgcaagagaaa
tacctgctccgtttagtcagtgcaatggaagaggtttttatagagaaacatggcatccat
cctgcactggtggctgatgttcatcagtatttttaccgcagaacaggggtgattggcatt
caaccagaagacgtgacagaggcagcaaaaaaaatggtgaaggagaatcgtctgtactgc
tgtctgatttgcaatgcactgtctgaactccatgttccctctgagtggttggtgcctggt
ggaaaactatacaaccttgctaagtctactcatggcactctccgtggagacaagaactac
acttttccattgaataacttagtatgctcctactgccctgagagggatgcactggttcct
gactacaaactcagttcactgaccacctgcacctggtgccacagaaactctgcacggcat
gtccgtggtgatggatctatagtgtacattgatggggaccgtacaaacacacgctcacag
ggtggtaagtgtggttgtggctttaaacatttctgggaaggaaaggagtatgataacttg
ccagaggcatttccaattacccttgaatggggtggccgtgtagttcgagagactgtctat
tggttccagtatgaattagatgtggcactgaacagcaatgtctacaatgtggcaatgtgc
ctcgtcacaaagcacttcccaggagagtttggcagtgagattcttgtgcagaaggtagtg
aacactgttctgcaccatacagcaaagaagaacccagaggagtaccaccccgtggctata
gagggtgctcacatgcagggtcaaggtcaagggggtgggaaagtggtagagtgggatgca
aaccctccccaaaagattatattgacaggacaaaagggccgcacattacataaagaggaa
ctggtgatgagccaagcagagagaagtctgcaacataagattagtgagcaggcagctctg
tctcaacgcagacgcacacaacatcagaggatgcaagaccagattgcagagcctcgccct
gcctcccctgcccccttctcctcagccccacccacacccactaaaggcttgacccctagt
gggcaaaagaagatccgggtgacaaccagtgatgggagacaggcgacactacagctgcaa
gcccataatacctatgcagagctgcaggaagccatcacagaggccttcaacttacagccc
caccaacagtgcattcgacatggctttcctcctcgggaactgcccccaccacccccagaa
caacaggaccaacctgtggccctgcaacatggagaccgcattactgtggaagtgctcaag
gagagtgtaccagattctcaaacagatactcataccccaatggaaccttggctcagcaga
accagcagccgagagttagaggatggtgttgacctggagatgtcttcactctgtctcctt
gcaacacttatgggtgaggatgtgtggtcatatgcaaagaagttacctcatctgtttcag
cagggaggagtcttctataacattgtaaagaaagatatgggtctattggatgggaagcac
tgcactctgccacacctgactggtaagacatttgtgtttaatgcagcagagcagcgtttg
gagctgtgtgtggatgctgctggccacttcccagtgggccctaatgtggaggaaattata
caagagacattgtcccaactttgttctgaggcttcccttcacaaccgtgacggaagccct
gctcatggcctaaaactgggcagtggaggggtggtgcgcaagaaggagcaggcagttact
gctttccagggaaaaggccactcactgggatccacctcacatgagcacccaccaatcagg
cgtgaacacagcaacggagtggacctaagtggcagtgtacagggggaagggctagcacgg
gcaagggaagagctggtgcgtgtggccccaggcatgctcaccctgcgggaagggtgtcgg
gaattagaattagagcccacagcgattgaggctcaacggcatcgtctacaggagatggtg
tcaaatatacaggcttctatggacaaacacttacggcagcagacaacacctagcactgct
gctaagcaagatgacaaggaggaagagctagatgagcaaaaagatataaagagtcaaggg
gcagattctccaagcatctctgagcccatggaccagtccttatga
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