Silurus meridionalis (southern catfish): 124402946
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Entry
124402946 CDS
T08004
Symbol
zeb1a
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124402946 (zeb1a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
124402946 (zeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
zf-C2H2_15
Homeodomain
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
124402946
NCBI-ProteinID:
XP_046732368
LinkDB
All DBs
Position
20:10712600..10761829
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AA seq
1257 aa
AA seq
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MADGPRCQRRKQTKPRRNNARSYSNVSEAASDSDDDDKLHIVEEDSIPDTLEEKPTVFQL
SAAQQLHKGHTLNDGNLGPDALVQEIRVKEECLTDEENEEDRVNEAPWQGKTGIVCPDIP
EEEQSIPERGVHDENGTPDEFSQLHSCPYCSRGYKRHTSLKEHIKLRHEKSKDDFNCSLC
SYTFTYRTQLDRHMNAHKNGREERMVSHSGGNRKFKCTVCSKAFKYKHHLKEHLRIHSGE
KPYECSHCKKRFSHSGSYSSHISSKKCVAIAPAANGLSNTPVVKANVNCPARILLRENVD
IDNKPLEEQLPPKKIKEEHEMKPIRTTSVVTTTTTTSTSNNGNGISVQTAAPQSVVQTLV
LPTVGLVQPISINLRDLQNMLKVAVDGNMIWQAVASSNANGASSKVVNEGQPQAQTMLMQ
SPHPHLQLISAISLPVLDQDGNSKIIVNYSVDSQDINTAQLALPPQTTAQIKVQQPSMAS
PEVGKMNSTQNLKVVQTNSTQPNFTPTQKTPTSRSVPAHIRILKSTQSVAPKKAASIIRV
TKLVPGQAKHTQPAMLLLRTVSDSQGLLVRHLAAVNPQPQVTPPVGTTDMKTTPEYTVMA
AEHKSLIELNQVTEETKGQQFCSDNCQPEDLRPALRQRIQLKTEIESEIKTDSEEVSQIE
SKKERIRKEEIITLSHSTTPHRSVVCGDGFHNYATCLFCDNSPSSTGILNCLSSSEQDSD
RSLSSLLGVEDNGSAIQPPVKSLLPLLEAYNKDSQPSEEQLSQVAGLASLPVDVVSRWFH
RMRLKNILLSQAGNTQNRQQTVANSEPVPSMDTKSQNLDTPTEAHFEKAVGQNIDHPPLN
LSTNDPSIIKVEALEEKGQAEPLDLSFPKSCCNGNTSVTFAVSGTKPSGPTQEEPLNLTC
FKKDTLDGNTIYVTQSTKSPINIIATPLPTLVAIAEPGGLSCLRAAISTKQRAILIPQLS
YTYSSPYTNGKVNHTTSSSSEASTITTIPSIDTQRKVFNGCQEKTDAGDESMSGCEGLND
SSLSPNKKRRKIHGGQYICDLCDKIFQKSSSLLRHKYEHTGGNRMEQACQKKRMGKRPHE
CGVCKKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCRKEVYDQ
PEPNNTSSTPPSQLDSDERESEAEEEIDDDEDPKREKDEDFSEFDMSDIRVVRVGEEYDD
EEEEEELGGEKKQVEEEDPLGLEVMKTSGIEDMMNSKIEDEIRKPMENDVFVTVENK
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgccagcgtagaaagcagacgaagccaaggagaaataacgcg
agaagttattcaaatgtgtcagaagcagcttcagattcggatgatgatgataaacttcac
attgtggaggaagacagtattcctgacactttggaggaaaagcccacagtatttcagctc
agtgcagcacagcaactacacaaagggcacacattgaatgatggcaacctggggccagat
gctttagtacaagaaataagggtgaaagaggagtgtttaactgatgaagagaatgaagaa
gatcgggtgaatgaagccccatggcaggggaaaacaggcattgtttgtccagacattcca
gaagaagaacagagcataccagaaagaggagtccatgatgagaatggtacacctgatgaa
ttttctcaacttcactcatgtccatactgctcccgaggttacaagcgtcacacatcgctg
aaggaacacatcaaactgcgtcatgagaaaagcaaggatgatttcaattgctccctctgc
agctacactttcacctatcgcacacagcttgaccgacatatgaatgcccacaaaaatgga
agagaggagaggatggtttcacattcaggaggaaacagaaagtttaaatgcacagtgtgt
tctaaagcctttaaatataagcatcacctaaaggaacaccttcgcattcacagcggtgaa
aaaccatatgaatgctctcactgtaagaagcgcttttcccactccggctcctacagttct
cacatcagcagtaagaagtgtgtagcaattgcacctgctgcaaatggcttgtctaacact
cctgtagtcaaagcaaatgtgaattgccctgcacgtatcctcttgcgggagaacgttgat
attgataacaagcctttagaggaacagctgcctcctaagaagattaaagaagagcatgaa
atgaaacctatcaggactacatcggttgtaactacaaccaccactaccagtacttctaat
aatggcaatggaatttctgttcaaacagctgctccacagagtgtggtacaaacattagtg
ctacctactgtgggtcttgttcaaccaattagcatcaacctacgagacctccagaacatg
ctgaaagtggcagtggatgggaacatgatatggcaagctgtggctagctcaaatgctaat
ggagctagtagtaaagttgttaatgaagggcagccacaagcacaaacaatgcttatgcag
tctccccatccccatttgcagttgatttctgctatatctctccctgtgctagatcaggat
ggaaattccaaaattatcgtaaactatagtgtagactcacaagacataaatacagcacag
ttggcattgccacctcaaactacagcccaaataaaagtgcagcaaccaagtatggcatca
ccagaagtaggaaagatgaattcaacacaaaatctaaaggtggtacaaactaactcaaca
cagccaaatttcactccaacccaaaaaacacccacttccagatctgtacctgcacacata
cgtatactaaaatccacacagtcagttgctccaaaaaaagcagcatctataattagggtc
acaaagctggtccctggacaggctaagcatacacagccagcaatgttgcttctaagaaca
gtcagtgattctcagggcctgttggtgagacatttggcagctgtgaatccacaaccacaa
gtaactccacctgtaggaactacagatatgaaaacaactccagaatatactgtcatggca
gcagaacacaagtcactcattgaactaaaccaggttacagaagagaccaagggacaacag
ttctgtagtgacaactgccaacctgaagacctgaggcctgctttgcgacagagaattcag
ttgaaaaccgaaattgagtctgagattaagacagattctgaagaagtttcacaaatagaa
agcaaaaaggagagaataaggaaagaggaaattattacattgagtcattcaacaacgcct
cacagaagtgttgtttgtggtgatggatttcataattatgctacatgtctattttgtgac
aacagccccagcagcactggtatcttgaattgtctcagcagcagtgaacaagattctgac
aggtctctctcttctttgttgggagttgaagacaatggaagtgccattcagcctccagta
aagagtctccttcctcttcttgaggcatacaacaaagactcacaacccagtgaagagcag
ttgtcccaagttgcaggtctggccagtttgccagtggatgtggttagtagatggtttcac
agaatgcgcttaaaaaacatactactctctcaagctggaaatacccaaaataggcaacag
actgtggcaaactctgaaccagtgccaagtatggataccaaaagccaaaacttagacact
ccaactgaggctcactttgaaaaagcagtgggccagaacattgatcatcctcctctaaac
ctttctacaaatgaccctagtatcataaaggtggaggctttagaagagaaaggacaagct
gaacctttggacctttcattcccaaagtcctgttgtaatggcaacacctcggtcaccttt
gcagtgtctggcaccaagccatcaggtcccacccaagaagaaccgcttaatctaacatgt
ttcaagaaggatacattagatggcaacaccatttatgtgacgcaatccactaaaagtccg
ataaacatcatagccacacctttacctactctggttgccatcgcagagcctggtggactt
tcctgcctcagagcggccatttccactaaacagcgtgccatcctcattccccagctgtcc
tacacatacagttccccttacaccaatggcaaagttaaccacaccacttcctctagctct
gaggctagcaccattaccacaataccgtccatagacacacagagaaaagtattcaatggc
tgtcaggagaagactgatgctggagatgaatcaatgtctgggtgtgaggggctcaatgac
agcagcctctcccccaacaagaagaggaggaagattcatggtggccagtatatatgtgat
ctatgtgacaaaattttccagaagagtagttctttacttcgtcataaatatgagcataca
gggggcaacaggatggagcaagcatgtcagaaaaaaagaatgggtaaacgtcctcatgag
tgtggagtctgtaaaaaggcatttaaacacaagcaccacctaattgagcactcacgtcta
cactctggcgagaaaccataccagtgtgataaatgtggcaaacggttctcgcattctggc
tcctattcccaacacatgaaccatcgctactcctactgcaggaaggaggtttatgaccag
ccagagccaaataatacttcatctacacctccctcacaacttgactcggatgagagggag
agcgaagctgaggaggagatagatgacgatgaagacccaaaacgtgaaaaagacgaagat
ttttcagaatttgacatgagtgacataagagtggtcagggttggtgaggaatatgatgac
gaggaggaggaggaagagttggggggtgagaaaaaacaggtggaagaagaggacccactg
gggttggaagtaatgaagacttcaggaatagaagacatgatgaacagcaaaatagaggat
gaaatacggaaaccaatggagaatgatgtgtttgttactgtagaaaacaaataa
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