Silurus meridionalis (southern catfish): 124402957
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Entry
124402957 CDS
T08004
Symbol
sbno2a
Name
(RefSeq) protein strawberry notch homolog 2a
KO
K26273
protein strawberry notch
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124402957 (sbno2a)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124402957 (sbno2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
124402957
NCBI-ProteinID:
XP_046732395
LinkDB
All DBs
Position
20:complement(4543604..4576048)
Genome browser
AA seq
1621 aa
AA seq
DB search
MPISTSVVMNTEDFLHPEGPQLESPKYSAPSPPLPNESQLFSSSTWTFSQPLQYNQYSYP
MQQSGRQFPVNNSSLDDFSSLDFSNLTSDRNENFATELPCMDDLSNGSLFSSTADSLSEY
TDPCFSIDGMSHLPSEGPASAPAFWEPPGHSQRQLTRFPALHNLDELSAILNNQPLEAYK
PPEIISQTPPEEEEEADEEETEELGHVDTYSEYKPSKSTIGISHPDIVVETSTLSSVPPP
DITYTLSIPDKTILTGMLSALQLEAIIYTCQQHEVILQNDQRAGFLIGDGAGVGKGRTIA
GIILENYLKGRKQALWFSVSNDLKYDAERDLRDIDALNIPVFALNKIKYGDTATSEGVLF
ATYSALIGESQAGGQHRTRLKQILDWCKPGFDGVIVFDECHKAKNATSTKMGKAVLDLQN
KLPRARVVYASATGASEPKNMIYMSRLGIWGEGTPFRTFEDFLHAIEKRGVGAMEIVAMD
MKVSGMYIARQLSFSGVSFRIEEIALDEEIKVVYNKAARLWAEALEVFTRAADMLGLVSR
KSLWGQFWSSHQRFFKYLCIAAKVRRLVELAKAEMNQGKCIVIGLQSTGEARTREVLDEN
DGHLDRFVSAAEGVFQSLVQKHFPLEKPKREKSAANKRKRKPRGRPPKFPKHCVEVGGVI
KISDGSDSDSEDMDSDSNSSHESLQDNDDVIFVNHINGPTAKLEELKHGLLAKIAELGKE
LPLNTLDELIDQFGGPEKVSEMTGRKGRVVRRLDGRVQYESRAEQGFTIDHVNIKEKERF
MDGEKLVAIISEAASSGISLQADKRVKNKKRRVHMTLELPWSADRAIQQFGRTHRSNQVT
APEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTKALDR
ITKAILGHIENKVPPPKGYPGGEARFFADMKKGMIDVGIFCREQRYTLNTEKDCTITKFL
NRILGLEVHQQNFLFQYFINNFEYLIDKDKKEGKYDMGILDLAPGNDEIREEKQEVFLTP
GNPQEGQVILYKISVDRGMPWVEASSKANTLTGDYEGFYLSHKLRGSQPCVLLAEQGRGR
NLVVYKPNIGRQAHPENLDNLLQRYRKVTSEEAKDCWENQFGFSLQKCSHANWKGKCKQV
EQGQECWQGMRLRQYHMLCGALLRVWKRVADVVSDITNSSILQIVRLKTKQNSKQVGIKI
PENCVERVRSELSQMDTEVKRARQQKEQRAQEQRAQEQRAQEQRVQEQRIRQELLRLEQQ
KRFKSFGYTAMHLTNPPPYPGQLPKNRAVDEVLDLTLSPCPSPEPNLTHANGALSLNGLS
GMNSISGMRRAAGEGGPKIPETFYLEELISQEQQRERPPPLQHKMTHNSLDALQTIHTLK
QHAALSVLQQNRPNPGHLLTPQQNSSSQFSTQLLRHNGSKPDINTLTNHGIRVQPFSQHV
NSMSLPPHLLQPSPIQQDSRQHSLLHTQTHSLHAHVRENQMPVSEPAPHSLKLGQQGSLA
CQSENSAPSQEDFNFNLGLLGHPSFSLTPQAPPSPSVSCSSPGTSSLFNSDPQSSSLSDS
ISPSSLFAPLSSERQSLPLPNGHSSMDAQDAHKTLDRLARGSSADRRHSVIQFNSLEWDT
P
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgcccatctcgacatctgtcgtcatgaacacggaggacttcctgcacccggagggccct
cagctggagagccccaaatacagtgcgcccagtcctccactccccaatgagagtcagctg
ttttcctcttccacatggacattttcccagccgcttcagtacaaccagtacagctatcct
atgcaacaatctgggaggcagttcccggtcaacaactcatctctggatgatttcagctca
ttggatttctcaaacctcacatcagacaggaatgaaaactttgcaacagaactgccatgt
atggatgacctgtcgaacgggtctctgttctcctctaccgctgactcgctgtctgaatat
actgacccttgctttagcattgatggcatgtcccacctacccagcgaaggccctgcctca
gcccccgcattctgggagccacctggacacagccagagacagttgacacggtttccagct
ttacataatctggacgaactcagtgccatcttgaacaaccaaccattagaagcatataag
cctcctgaaatcatcagtcagactccaccagaggaggaagaggaggcagatgaggaagag
acggaagaactcggtcacgtagacacttattctgagtacaagccatcgaaatctactata
ggaatttcacatccggacattgtggtagagaccagcactttgtccagtgtccctccccca
gacatcacctacacactctccatccctgacaaaactatcctgactggcatgctctctgct
ttgcagctcgaagccatcatctatacatgccagcaacacgaggtcatcctgcagaacgac
cagagggcaggctttttgattggggacggagccggtgtggggaagggtcgcactatagct
ggcatcattctagaaaactacttaaaaggaaggaagcaagccctgtggttcagtgtgtct
aatgacctgaagtatgatgcagaaagagacctcagggacatagatgccctgaatattcct
gtgtttgctttaaacaagattaaatatggagacacagctacctcagagggcgtcctgttt
gccacatattcagcgctgatcggggagagtcaggcagggggacagcaccgcacccggctc
aagcagatattggactggtgtaaacctggctttgacggagtcattgtgtttgacgaatgc
cataaagctaaaaacgcgacatccacgaagatggggaaagctgtcttggacctgcagaac
aagctgccccgggccagggtggtgtacgccagtgccacaggtgcctccgagccaaagaac
atgatctacatgagccggctcgggatttggggcgagggaacacccttcaggacgttcgag
gactttttacatgccattgagaagaggggtgtcggcgccatggagatagttgccatggat
atgaaagtcagtggcatgtacatagcccggcagctcagcttttcaggcgtgtcgtttcgg
atcgaggaaatcgcactggatgaggagatcaaggtggtctacaacaaggcggctcgactg
tgggctgaagcactggaagtgttcaccagagcagcggatatgctgggactggtctctcgt
aagtccctctggggccaattctggtcctctcaccagcgcttcttcaaatacctctgcatt
gccgccaaagtgcgccgcctggtggagctcgctaaggccgagatgaatcagggcaagtgc
atcgtgattgggctgcagtcaaccggtgaggcccggactcgcgaggttctggatgagaat
gatggacacctagaccgattcgtctctgcagctgagggtgtgttccagtccctggttcag
aagcactttccattagagaaaccgaagcgagaaaagtctgctgcaaataaaagaaaacga
aaaccaagaggtcgtccacccaaatttcccaaacactgtgtagaggtaggcggagttatt
aagatcagcgatggctccgattcagactccgaggacatggatagcgactcaaactcatct
cacgagtcactgcaagacaatgatgatgtcatctttgttaaccacatcaatggacctact
gcaaaactagaggagttgaagcatggtttgctggccaagatagcagagctgggaaaagag
ctcccactcaacacactggatgagctgattgatcaattcggagggccagagaaagtgtct
gagatgaccgggcgtaagggtcgagtggtgcggcggctggatggtagagtgcagtatgaa
tcacgtgctgagcaaggattcaccattgaccacgtgaacatcaaagagaaggaacgcttt
atggatggcgaaaagctggtggcgatcatctccgaggctgcaagttcaggaatttcacta
caggcagataaacgtgtgaaaaataaaaagagacgggtgcacatgacgctggagctgccg
tggagtgccgatcgtgccattcagcaattcggtcgcacgcatcgctctaaccaagtaaca
gctccagagtacatcttcctgatctcagagttagcgggggagaggcgctttgcttccatt
gtggccaagcgcctggagagtttgggggcattgacacatggtgatagacgagccactgag
tccagagacctgagcaaatacaactttgaaaacaaatacggcacaaaagctttggatcgg
atcactaaggcgatcctgggacacattgaaaacaaagttccaccaccaaaaggctatcca
gggggcgaagcacgattctttgcagatatgaagaaagggatgattgacgtgggcattttc
tgtagggagcaacgctataccctcaacacggagaaagactgcacaatcactaaattcctg
aatcgcattctgggcctggaggtgcaccaacagaactttctgttccagtacttcatcaac
aactttgaatacctgattgacaaggacaaaaaggaaggcaaatatgacatgggtatactc
gatctggctccaggtaacgatgagatccgtgaagagaaacaggaagtgttcctgacccca
gggaacccccaagaaggccaggtcatcctttataagatcagtgtggatcggggaatgccg
tgggtcgaggcctccagcaaagcaaacacactgactggggattatgaaggcttctacctt
tcacacaagctacgagggagccagccatgcgtgttgctggcagagcagggccgaggtcgg
aatcttgttgtctataagcccaacatcggcagacaggcccaccctgagaacctggacaat
ctgcttcagcggtaccgcaaggtgacatcagaagaggccaaagattgctgggagaatcag
tttggcttctcgttacagaagtgcagccatgcaaactggaaaggcaagtgtaagcaggtg
gagcagggtcaggagtgctggcagggcatgcgtttgagacagtaccacatgctgtgtggt
gctttgctcagagtgtggaaacgagtcgcagatgtcgtctcggacatcaccaactccagc
attctgcagattgtgcgcctgaaaaccaaacagaacagcaaacaagttggaataaaaata
ccggagaactgtgtggagcgtgtacgcagcgagctctctcagatggacacggaggtgaag
cgagcgcggcagcagaaggagcagcgggcgcaggagcagcgggcacaggagcagcgtgcg
caggagcaacgggtgcaggagcaacgcatccgtcaggagcttctcaggctcgagcagcag
aaaaggttcaagagttttggttacactgctatgcatctgacaaatcccccaccctacccc
gggcaactgcccaagaaccgtgcagtagatgaagtgctggacctgacactcagcccctgt
ccgtcccctgagcccaatttgactcatgcaaacggagccctgagcctgaacggattatca
ggcatgaacagcatttctggcatgcggagagcagcaggggaagggggcccgaagatccct
gagacattttacctggaagagctgatctcccaggagcagcagagggagagaccaccaccc
ttacagcacaagatgacccataacagcttagacgccctgcaaaccattcatacgctgaag
caacacgcggcgctgagcgtgctccagcaaaacaggcccaacccggggcatttgctcaca
ccccagcagaactcaagcagtcagtttagcacacagctgctccgacacaacgggagcaaa
ccggacatcaacacgcttaccaaccacgggatacgcgtgcagccgttttcacagcatgta
aactccatgtcactgccacctcacttgcttcagccctctcctatccagcaggacagtcgt
caacactcactgctacacacacaaacgcacagtttgcatgcacacgtacgggaaaaccaa
atgccagtcagcgaacctgctccgcattcactaaaactggggcagcaggggtcactcgcc
tgtcagtccgaaaattcggcaccttcacaggaagacttcaatttcaacctcggcctgctc
ggtcatccttcgttctcgttaaccccccaagcccctccatccccttcagtttcgtgttcc
tcgcctgggacgtcgtcgctcttcaattcagacccccaatcatcgtccctctcagactcc
atctctccttcttcgttgttcgctccgttgtcgtccgagcgacagtctcttcctttaccc
aacggccacagcagcatggacgcacaggacgcccacaagaccctcgaccgactggctcgg
ggaagttctgcagaccgccgtcactcagtcattcagttcaattctcttgaatgggacacc
ccctag
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integrated database retrieval system
