Silurus meridionalis (southern catfish): 124402975
Help
Entry
124402975 CDS
T08004
Symbol
dop1a
Name
(RefSeq) LOW QUALITY PROTEIN: protein dopey-1
KO
K26680
protein dopey
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124402975 (dop1a)
Membrane trafficking [BR:
smeo04131
]
Endosome - Golgi transport
Others
Others
124402975 (dop1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_DOP1
Dopey_N
DOP1_C
TPR_DOP1_M
PH_RBD
Motif
Other DBs
NCBI-GeneID:
124402975
NCBI-ProteinID:
XP_046732420
LinkDB
All DBs
Position
20:complement(19316866..19351028)
Genome browser
AA seq
2424 aa
AA seq
DB search
MNTEEVELLSDSKYRNYVAAVDKALKNFEYSSEWADLISALGKLNKVLQNNAKYQVVPKK
LTIGKRLAQCLHPALPSGVHRKALETYEIIFKIIGPKRLAKDLFLYSSGLFPLLSNASMS
VKPVLLGLYETFYLPLGKTLKPGLQGLLTGVLPGLEEGSDYHDRTNALLEKVACAVEQSV
FYSALWGSILTSASVRLPAISFVLLHLNRKLSMEDQLYIIGSDIELMVEAVSTSVQDSSV
LVQRSTLDLILFCFPFHMSQATRPDMIRILSAALHVVLRRDMSLNRRLYAWLLGFDNNGL
KTGPRNSRLSNPEEHATHYFNTYSKDLLVQAMVGILQGKARGGEEESALMHDLKPFRILI
SLLDKPELGPAILEDVLIEVFRTLHTQCRAELDLQNHNPFCKDHTQLSSKLRENKRTAEL
IKTANLLFNSFEPYYMWDYIARWFEDSCRKTLSVSDSSLLSLFEFCQLIDFLLDIVSLPT
RSMRVICQETYIEIQTEHLPQLLLRMVSAITLHLGALSLSELKHCLCLCSKILSKVQPPL
VSPLILPSCSSAREQDTWQSVPSSLDVPVSEDVFEDRESHSAVRSPESSFTEFVQYEEAE
SDDHAPPCSNPRLHPSPAVCKARGTPVMQRCLEDFQHFLCRLVELYIAPGHGGGGANQGE
AGLTESMCVFDQKECVCAFTAACQLFLECSSFPVYIAEGNLKSPSRDESEDSGSVTPPPQ
WLEALMNACFSELDFSVRAVSISLLMDLVGLTQSVAMVTAERVGVADSSQPMSPSQGRVA
VVIRPPLTQGMLKHIAENTDFFKSVAVLLWDQLGKATPQHHQRSVEMFYQLHNLVPSASI
CEDVISNQLMHRDKRIRLEAHVKFSVLWHLTRDLNITKSSPFSRTFDRSLFIMLDSLSFW
DGSVSAVGRAWFNQVLQRHDIARVLEPLLLLLLHPKTHRVSVQRVQAQRHWTWVYSDPLA
PEPGSEPHGAGCLGHTCCTDPDYCMSQDNLKVQVLPVDDMEPFSLTVNPLSDSLSFLSLS
IENLHFCGEYQPPEQQGEPLSSESTGSQSSTVDNGSLSELEGSSHTCDQAAQETDYEDSL
KMVVSVILDELMERVVQMVEESSGETYSPSEVWTRSDSDSSNTSEASVEHQANMAPFPGT
QCRTLPELVAGGTLEFLTVPSSGDEPHEGITRHSSSPSIVTLPESSGHGSPELSLLSDDP
RSRKRSHSSTQLSLKGKIMERLTEKSPGAKPKVKKNKKKEEERRKSNQADKNRPPSIFFG
DSLDLENWYSCGEGEVSEIESDIGSPSGGASGVPGSSRSSTCPTRFNIHPLYQHVLLYLQ
IYDSSRALHALSAIAAMLRTSPAGFVNAISTTSINNTYTPQLSLLQNLLARHRVSVMGKD
FYCPISQDSHSHSFRSAMYLEIIISLCLYFLRSYYSSHVPAAPQDLTGNRAMQLTSIEVL
TLLFNELAKVTGSSAKGFARFICDVLSKCKVQKVALHCLLSSIFSAQKWHEQLMRGTNLP
TVEEGLSEDSVINLSEDQLDGCSGVQSQLLRLLQSLIVLEHHVLVPGDENGEAGPGTGNS
GGGGAAGGGGFEILGGEVEHVNPQQPLASLQYLHGHPITAQGMFLCAVIRALHQHHACKM
HPQWIGLVTATLPYMGRVLRRVVASVTLQLCRNLDNLIQQYRYETGITDTRPLWMALCIP
PDLILTVLEGVTAIIHYCLLDPSSQYHQLQVSVDQKHLAEARSGILSILHTIMSSVTLLW
SALYLADSSERPSGATCSSNINLGSTKNLRQQILELLGPISMNHGAHFMAAIAYVWNERK
QNKAPARNKVIPTASDEQLLLVDLVRSVNAMRTETVMQMVKEVLKQPPAIAKEKKHLSLE
VCMLQXFYAYVQRIPVCSLVDSWSSLLSLLKDSVQLSLPAPGQFLLLGVLNEFILKNPTL
ESKKDQRELQDVTHKIVEAIGTIAGSSLEQTTWLRRNLEVKPSPQIVVEGAGLESDVEDL
MLTVMEASSFTPSVYSVHALTLLAEVLAHLLDMVFYSDEKERVIPLLVNIMHYVVPYLRN
HSAHNAPSYRACIQLLSSLSGYQYTRRAWKKEAFDLFMDHTFFQMDASCVSYWRSIIDHL
MTHDKTTFRDLMTRVAVAQNSSLNLFTNRDAELEQRAMLLKRLAFTIYSSEVDQYQKYLP
DIQERLVESLRLPQVPILHAQVFLFFRVLLLRMSPQHLTSLWPTMITELVQVFLLMEQEL
TADEDITRTSGPSVAGLETTYSGGNGFSTSYNSQRWLNLYLSACKLLDLALTLPSESLPQ
FQMYRWAFIPESSDDSGLEVRRQGTHQREFKPYVVRLAKLLRKRAKKSAEDDVSARTLAW
EPGRLTLTLFGIRSIEQLLPFFTVLNQVFSSKSGIRSASFHSSSSPGDAPKNSKHESQKM
FWSRARHEIEEMVEKDFLEGLIKT
NT seq
7275 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagaagaagtggagctgctcagtgactctaagtacaggaactacgtggcggca
gtggataaagctctgaagaattttgagtactcgagcgaatgggccgatctcatctcagct
ctcggaaaactcaacaaggtgctgcagaacaatgcgaagtatcaggtggtccccaagaag
ctgacgatcgggaagcgtttagcccagtgccttcacccagcactgcccagtggagttcac
cgcaaagctctggagacgtacgagatcatcttcaagatcatcggtccaaaacgcctcgcc
aaggacctgttcctgtacagctctggacttttccccttgctgtcgaacgcctcgatgtcg
gtaaagccggtgctgttgggtttgtacgagacgttttatctcccgctcgggaaaacactg
aaacctggactgcagggactcctgactggtgtactgccgggactagaggagggatctgac
taccatgacaggacgaatgcgctgttggagaaggtggcgtgtgcagtggagcagtcggtg
ttctacagcgccctctgggggagcatcctgaccagcgcgtcagtcagactgccggccatc
agcttcgtcctcctgcatctcaaccgtaaactctccatggaggaccagctgtacatcatc
gggagtgatattgagctcatggtggaagcagtcagtacgtctgttcaggactccagtgtg
ttggttcaaaggagtacactcgacctcatcttgttctgcttccctttccacatgagccag
gccacgcgtcctgatatgatccggatcctctctgcagcgctgcacgtcgtcctgagaaga
gacatgtcactaaaccgccgcctgtacgcctggcttctgggctttgacaacaatggtctg
aaaacaggtcctcggaacagtcgcctgagtaacccagaggaacacgcaacacactacttc
aacacttactccaaagacctgctggttcaggccatggttgggattctgcagggaaaagct
cgaggtggtgaggaggagagcgctctgatgcacgatctgaaacctttccgcatcctcatc
agtctactggacaaacctgagctgggtcccgccatcctggaggacgttctaatcgaagtg
ttcaggaccttacacacccagtgccgagcagaactggacctgcagaaccacaaccccttc
tgcaaagaccacacccaactcagcagtaagctgagagagaacaagcgcacagccgagctg
atcaagacggcgaacctgttatttaactcctttgagccgtactacatgtgggattacatc
gcgcgctggttcgaggacagctgcagaaaaactctgagtgtatcagactcttcactcctc
tcactgttcgagttctgccaactcatcgacttcctgttggacatcgtgtctctgcccact
agaagtatgcgagtgatctgccaggagacgtatatagagatccagacagaacacctgccc
cagttattgttgaggatggtgtctgccatcacgctgcatctcggagctctcagtctgtcg
gagctcaaacactgtctgtgtctctgctccaaaatcctcagcaaagtccagcctccactc
gtctctccactcatcctcccatcctgcagctccgcccgagagcaggacacgtggcagtct
gtcccgtcgtctctggatgtcccagtcagcgaggacgtgtttgaggacagagaaagtcac
tcggccgttcgttctccggagagcagctttacagaatttgttcagtacgaggaggcggag
tctgatgaccacgcccctccatgctccaatcccagactccacccttctcctgcagtgtgt
aaagccaggggcactcctgtgatgcaacgctgcctcgaggacttccagcatttcctgtgc
agactggttgagctctacatcgccccggggcatggagggggcggggctaatcagggggag
gcggggttaacagagagcatgtgtgtatttgatcagaaggagtgtgtatgtgcgttcacg
gctgcgtgtcagctcttcttggagtgttccagcttccccgtgtacatcgcagagggaaac
ctgaaatctcccagccgagatgagagtgaagacagtggcagtgtgactccgcctcctcag
tggctcgaggctctgatgaacgcctgtttctcggagttggactttagcgttcgtgccgtc
tccatctctctcctcatggacctggtgggcctgactcagtccgtcgccatggtgacagca
gagcgggtgggcgtggccgactcctctcagccgatgagcccgagtcagggccgtgtcgcc
gtggtgatcaggccgccgctcacgcagggaatgttgaagcacatcgccgaaaacacagac
ttcttcaagagtgtggcagtgttgttgtgggatcagctgggcaaagcgactcctcagcat
catcagcgcagcgtggagatgttctatcagctgcacaacctggttccttcagccagcatc
tgtgaggacgtcatcagtaaccagcttatgcacagagacaagaggatccgtctggaggct
catgtcaaattctcagtcttgtggcatctcacccgagacctgaacatcaccaagtcttca
cctttcagccgcaccttcgacaggtctctgttcatcatgttggacagtctgagtttctgg
gacggttcagtgagcgctgtgggacgagcgtggttcaatcaagtgctccaaagacacgac
atcgcccgagttcttgagccacttcttctgctgctgctgcatcctaaaacacaccgcgtg
tccgtccagcgcgttcaggctcagcgccactggacctgggtctattctgaccccctggca
ccagaacccggatcagaaccacacggagcaggatgtcttgggcacacatgctgcactgac
ccagattattgtatgtctcaggataacctgaaggtccaagtccttcctgtggatgatatg
gagcccttcagcctgacggtgaaccctttaagtgacagtctgtcttttctgagcctcagc
attgaaaacttacatttttgtggtgaatatcaacctccagagcagcagggggagccactg
agctcagagtccactggctcccagtcctccactgtggacaacggcagcctgagcgagctg
gaaggaagtagtcacacatgtgatcaggcagcacaagagacagattatgaagactcccta
aaaatggttgtttctgtgattcttgatgaactgatggaaagagtggtgcaaatggtggaa
gagtcctcaggggagacatattcaccttcagaagtttggactcgaagtgactcagacagt
tccaacacatcagaagcatccgtcgaacaccaggccaacatggcaccatttcctggcacc
cagtgtcgaacacttcctgaattggtggctggaggcacattggaatttctcacagttcct
tcttcaggtgatgaaccccatgaaggaataacaagacacagttcctcaccttccatcgtc
acacttccagagagtagtggacacggtagtccagagctgagcttgctctctgatgaccct
cggtcccgaaaacgcagccacagcagcactcagcttagcttaaagggtaaaattatggag
cgtctcactgagaaatctcctggagccaagccaaaggtgaagaagaacaagaaaaaagag
gaggaacgtagaaaatcaaaccaggcagataagaaccgtccccccagcatcttctttggt
gacagcttggacttggagaattggtacagctgtggtgaaggagaggtttctgagattgag
agtgatattggctctcctagtggtggtgcaagtggagtgccaggttcatcgcgatcttct
acatgtcctactcgctttaacatccaccccctttaccagcatgtcctgctgtacctccag
atctatgattcctctcgggctctccatgctctttctgccatagctgccatgttgcgcact
tctcctgccggctttgtcaacgctatctcgaccactagcatcaacaacacctacacacct
cagctctcgctgcttcagaaccttctagcccgtcatcgcgtttccgtcatgggtaaagat
ttttattgccccatttcacaggattcgcattcgcattccttccgcagtgccatgtaccta
gagatcatcatttcactgtgcctctactttttgagaagttattattcttcacacgttcca
gcagccccacaggacctaacaggaaaccgggccatgcaactgaccagcatagaagtcctg
acactgctcttcaacgagctggccaaggtgacaggcagctcagctaaagggtttgccagg
tttatctgcgacgtcctgtccaagtgcaaggtgcagaaagtggcactgcattgcctgctc
tcgtccatcttcagcgctcagaagtggcatgagcagctcatgcgtggaaccaacctgccc
acagtcgaggagggattgtctgaggacagtgtcatcaatttgtctgaggaccagctggat
ggctgcagcggcgtacagtcgcaactccttcgcctgcttcagagcctcattgtcctcgag
catcacgtcctggtccctggagatgaaaatggagaagctggtccaggaactgggaactcg
ggaggtggtggtgcagctgggggtggaggttttgagattctgggtggagaagtggaacat
gtaaatcctcaacagccattggcttcactgcagtacctgcacgggcatccaattactgca
caggggatgtttttatgtgcagtgattcgagcgcttcatcagcaccatgcctgtaagatg
cacccacagtggattggcctggtgacggccacgctgccctacatgggtcgggttctgcgt
cgtgtggtcgcttccgtgactttgcagctctgcaggaacctggacaacttgatccagcag
taccgctatgagaccggtatcacagacaccaggcccctgtggatggcgctgtgtattcct
cctgatctgatcctcactgtgctggagggagtgacagccattattcattactgcctgctc
gacccgtcgtctcagtaccatcagctccaggtgagtgtggatcagaagcacctggctgaa
gcacgctccggcatcctgtccatcctccacaccatcatgtcctcagtcacgctgctctgg
agtgcactttacctggctgacagctctgagcgacctagtggcgccacctgcagctccaac
atcaacctgggctccactaagaatctccgacagcagatcctcgagctccttgggccaatc
tctatgaaccacggagctcacttcatggctgctatcgcttacgtctggaacgaacgaaaa
cagaacaaagctcctgccaggaacaaggtaattcctacagcgagtgatgaacagctcctc
ctggtggatttagtgagaagtgttaatgccatgcgcactgagaccgtcatgcagatggtg
aaggaggtcctaaagcagccgccggccatcgccaaggagaagaaacatctctctcttgag
gtctgcatgctccagnntttttacgcttatgttcagaggattccagtgtgtagtttagtg
gacagctggagctcactgctctctctgctcaaagactcggtacagctcagccttcctgct
cctggacagtttctcctcctcggagttctaaatgaatttattttgaagaatccgactctg
gagagtaagaaggatcagcgtgaactgcaggacgtgacccataagatcgtggaggccatc
gggaccatcgcaggttcctctctagagcaaacaacatggttgaggaggaacctggaggtg
aaaccttctccccagatcgtagtggaaggagcagggctggagtcagacgtagaggaccta
atgctcacagtgatggaggcgtccagtttcactccttcagtctacagtgttcatgctctc
acactgctagcagaggtgttggctcacttgttggacatggtgttctacagtgatgagaag
gagagagtgatccccctgctggtcaacatcatgcactatgttgtgccatatttacgcaac
cacagtgcccacaacgctccaagttatcgtgcatgtattcagctcctgagcagtctgagt
ggatatcagtacacacggagagcgtggaagaaagaagcttttgacctgttcatggatcac
accttcttccagatggatgcgtcgtgtgtgagctactggagatccatcatagaccatctg
atgacccatgataagaccactttcagagacctgatgacacgtgtagctgtcgctcagaac
agctctttgaatctcttcacaaatcgggatgcggagttggagcagagagccatgctgctg
aaacgcctcgccttcaccatctacagcagcgaagtggaccagtaccaaaagtacctccca
gatatacaggagcgcttggtggagtctttgcgtctccctcaggtaccgatcttgcacgct
caggtgttcctgttcttcagagttctgctgctgcgaatgtctcctcaacatctcacctcg
ctgtggcccaccatgatcactgagctagttcaggtgttcttgctgatggagcaggagctc
acagcagacgaagacattaccaggacatcaggtccctcagttgcaggattggagacgacg
tattcaggaggaaacggattctccacgtcctataacagtcagcggtggctcaatctctac
ctgtctgcctgtaaactgctggacctggcgcttacactgccctctgagagcctcccacag
ttccagatgtatcgctgggcttttatccctgagtcctcggatgattcgggtctggaagtg
cgcaggcaggggacacaccagagagagtttaaaccctatgtagtgcgtctggcgaagctg
ctgaggaaacgagcgaagaaaagcgcagaagacgacgtctctgctcggacgttagcgtgg
gaacccggacgcttgaccctgaccctgttcgggatccgcagcatcgagcagctcctgccc
ttcttcaccgtgctcaatcaggtgttcagcagcaaatcgggcatcaggtcagcgtccttc
cacagcagctcctctcccggcgacgcccccaaaaacagcaaacacgagagtcagaagatg
ttctggagccgagccagacacgagatcgaggagatggtggagaaagacttcctggaaggg
ctcataaaaacatga
DBGET
integrated database retrieval system
