Silurus meridionalis (southern catfish): 124402976
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Entry
124402976 CDS
T08004
Symbol
svilb
Name
(RefSeq) supervillin isoform X1
KO
K10369
supervillin
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124402976 (svilb)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Gelsolin / villin
124402976 (svilb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gelsolin
VHP
DUF7904
Motif
Other DBs
NCBI-GeneID:
124402976
NCBI-ProteinID:
XP_046732421
LinkDB
All DBs
Position
20:7804535..7853181
Genome browser
AA seq
2918 aa
AA seq
DB search
MLWNTRITSYIGHVEQCSHGLGGESAAKICNATLQQKEALSVSKDLSTEYKSSQTVRDID
NKILAVLPKVSELRKHFESEITSDKNMKRKERIARRLEGIETDVPSALATGMQYTPGMVT
NRLLEEDTPWYTRASDTNEPVRHYSRDELDNTERQSRAQTRPSAQLPVHLDQTSNPENPD
LASLSSKAERIARYKAERRRQLSERYGILLDQEPDIDYVPRHTRARREPMGKQALPDGGH
GQKQEQLREEKGRDSSTNRSRYSSSGVGRVSMPTDESTSHIHRERRNTFSYRDKRMDADQ
ESERANLDNYRRMPDSNPRTHPQEAPTTVDKGPAQQARGVTAVPRSPCAARRASLPSTRQ
GISPGDLFIEQQAQNILSRQGIRGRERRARDDSLGRMSDSGSDASSVRRLPVDTPSHLSP
YSDPTIHLETWTAEPTGQQHNLHREPSHYYRAHSAEPPRYQRAQSIESASHQQLLPSEQQ
GFPNVEHLNYDHRSQEHHKTSSRQPEYTQISPYYRDIQQPTKICRVPTQTHSINRDFQEL
FPETRNAPQPELKYIHAHQPMLVGNASHQQPLLYKVEQVPPSFGQNQQIISGYSHGHPLT
YGPIEDLHPAYGHTQHHSPSHWPSQQSAPLNGNIPCSSPRPSKTHVSAEPQGNADIPRLT
PIGREGEETKQTASADYIPLFQREGRSASRTDQPSKCLLKSRKAVLPSEIRRRERSVDDT
MQRHTEEVLEGRRSRRISQLEEFNRAGEVSVSQLDVEADKGRSRLSSFGEREGHDERRVS
PLGEEGSKGENKTNHMQNRAVHDDGKTSKSQERVGLGSKKRMQGENVGYERIEGNERWDD
CQISKLAQIQHHGDKQFGGIIGKSERKLQNFKPLEGSSKQVGNWVSKSDVPQGFEKVPTQ
FEIKDEQSVRRMASIEKVELNESRNLKVDVENSERQMMVQKDVSELQCRRRRTSQPEEDE
AHFRHRKLSQSEEDWKGRRVRRISQSGRWDGQDQIGHTAGHMEEDRHKKINMEIPKAMDT
TPTQQEGNDQSVHHRLDEAGCYLQSGSSLPQARHRRSRDDLKPKVRTRSMSDIGVAQRSA
AIRCLDRAASRESIMPTGIGQNVRETGATNGEVGALDTRVSVAKLRHSYLENASGHRPEL
SESKIDTAAMETDPAEVVEQEKGQRRPRRYINPGDDRKSSERFRTQPVTSAERLHSDRSL
ELHKTEVDEEKLDERAKMSVAAKRSLFRELEKTAESGVPKPRSRNAAVERRLRRTLDRSR
TQPVTTEEVVIAATSPGPPTQIATVQTTAPRFPSPTVVSTTMTNFSMKTPSAPDSAPQEK
EKEVSQGEVGTGERAGAEEPDLSTLSLSEKMALFNRLSHPPAQKAEDACPDTRPRRRNAR
FQTQPITQEEVNQDLMQTIDPSDHTGFISMPDGFVVPPHGNQLQNGGLKLEPLSASLIRS
VAAVTAQASVAMVTNLSVAIPADVHTETCPALSRTPTPAAPPNLVSSNHSPHDKLPAYER
GVRYFSLTESGENCPPEICSPPPSEEPIQPGQSKGLAARVSASEQKQEEDYMYRLGLAEI
GESKNPRVFNQSTHTHTHSHTHGEREAGLTDKKEREQREYDRVRLQDWERGKDKIPISQG
YLSPDAVQTASDAPEIGPSVFPVSTAVVSLQSTSRTSTAPSHSLTYLQHSSPPIQSSFHI
SPQTSPQTHPKPQPYLQSPPPPEAQIYSESFGQIQTKVSPQSINPNQSYSYTPPQTKVPP
QTQPKPQYIVPSCVQASPVAQEESETMTSMSIKERLALLKKSGEEDWKNRMNKKQEVVQE
VASMSNQIWEEQSFKKKEERAVIEEFASSEQVWEPVFASTYSPPPFHPTPKCQPVDHPCQ
RLGEGIEGQMSIEERKQMISTREEAWQSTGKGVANDSGQYTVAARMVKKGQIYESSGLAA
SSAVIRPILSPVSAKLKNGVPAISKPQEDIEVTADMESDKKLDKLETFLGRLNNKVTSLQ
ETTLTVTEKAVKEVMRLDDEIFSKFYRHVTDIPRSMPRVPIDDDFDAIFGKHTPKLASAM
VHHKRAIRPLRNVQASRNPLKILAARDDIRHEYTEQRLNIGILESKRVKQEKISKSTSIS
DAALAGLASKENYSSVSLRSVSVSEQVTNNSAAPYKKLMLMQVKGRRHVQTRLVEPRVSS
LNSGDCFLLVTPENCFVWIGEFANVIEKAKASELATFIQLNHDLGCRATQVDTIEEGVNP
ESPAAAEFWKILGGQASYQPSGTPEEDECFESAIVETNCIFRLVDDKLLPDDDFWGKVPR
CSLLGSKEVLVLDFGSEVYVWHGKDVTLAQRKVAFQLAKHLWNGIFDYTNCDINPLDPGG
CNSLIPRKGQGRPDWAIFGRLTEHNETSLFREKFLDWRESTDSLPKSSSEHSFEQKLALS
TPSRLESAAYDVGLMLPVLQSPISMVLEGQNVGRGHGPVESGCSEDHLRSLEISTLSVDV
WHILEFDYSRLPKQSIGQFHEGDAYVVKWKYMVSVAVGNRQKPEQVRSAGPGREKCCYFF
WQGRNCTVSEKGTSALMTIELDEERGAQVQVQQGKEPPCFLQCFNGGMIVHCGKREEEEE
NVQSEWRLYCVRGEIPVEGHLLEVACHCSSLRSRTSMILLNVNKALIYLWHGCKAQAHTR
AVANTAAEKIKEQRPLEAGLHSSCNLTIYECEEGAEPMEFWEALGRKDRKAYDCMLQDPG
KFNFTPRLFQLSSSSGEFVAQQFFYPSRTPDLVSAFPFLQEDLYSAPQPALFLVDNYHEV
YLWQGWWPQDTETPGSARIRWDADRKCAMETVLRYCREKNEQNPQKSYLIHAGLEPLTFT
NMFPSWEHREEITEVMEEEGEMCNQITLVEDVLARLCQSIYPLAALQSRPLPHGVDPLRL
EIYLSDEDFEKALEMKREDYEALPGWKQVNLKKAKGLF
NT seq
8757 nt
NT seq
+upstream
nt +downstream
nt
atgctttggaacactcggattactagctacatcggccatgttgaacaatgcagccatggg
cttggtggtgagtcagcagctaaaatctgcaacgctacactacaacaaaaagaagcacta
agtgtttcaaaagacttatccaccgaatacaaaagctcacaaactgtcagagatatcgac
aacaaaatccttgctgtgctgcccaaagtttcagagttacgaaagcatttcgaatctgaa
atcacaagtgataagaacatgaagagaaaagagaggattgctcgaaggctggaggggata
gagacagatgtgccatctgccctggccacaggcatgcaatacacacctggcatggtgacc
aatcggcttcttgaggaagacacgccgtggtatactcgtgcttcagacactaatgagcca
gtgaggcactacagtcgggatgagctggataacacagaaaggcaatcaagagcacaaaca
cgacccagtgcacaattacctgtgcatcttgatcagacttccaaccctgaaaaccctgac
ctggccagcctcagctccaaagctgaacgaatagcccgctacaaagccgaacgtcggcgg
cagttgtcagaacgttacgggatcctccttgaccaggagcctgatatagattacgtgcca
agacatacacgagcacgcagggagccgatgggcaaacaagctttgcctgatggggggcat
ggtcagaagcaggaacagttgagagaggagaaggggcgtgatagtagcaccaacaggtca
agatatagcagctcaggtgttggccgggtgtctatgccaactgatgaatctacctctcac
atacaccgggaaagaagaaacactttcagttatcgagacaaaagaatggatgcagaccaa
gagagtgaaagggccaacctggataactacaggagaatgccagacagcaaccctcgaaca
cacccacaagaagctccaactactgtggacaagggtccagctcaacaggccagaggtgtt
actgcagtgcctagatccccttgtgcagcacgccgtgcctcattgccttccacacgtcaa
ggaatctccccgggagacttgttcattgaacagcaggcacaaaacatcctcagccgacag
ggaatacgagggagagagagacgggcaagggatgacagcttaggacggatgtctgattca
ggatcagatgcatcatcggtccggcgtctccctgttgatactccttcacatttatcccct
tattctgaccctacaatccacctagaaacatggactgcagaacccacaggccaacagcat
aatttacatagagaaccttcccattactaccgagcacacagtgctgaaccaccacgatac
caacgtgcacagagtatagaatctgctagccatcagcaattactcccaagcgaacaacag
ggttttccaaatgtagaacatctgaattatgatcataggagtcaggagcatcacaaaact
tctagtcgccagccggaatatacacaaatttcaccctattacagggacatccaacagcca
actaaaatatgtagagttcccacacagactcattctattaacagagactttcaagagtta
tttcctgagactagaaatgcccctcaacctgaactaaagtatatacatgcccatcaacca
atgcttgtgggtaatgcttctcatcagcaacctctgctgtataaggttgaacaggttccc
ccatcatttggacagaatcagcaaattatttctggatacagtcatggtcatcctctgact
tatggtcctattgaagacttgcatcctgcctacggacatactcaacaccatagtccttct
cactggcctagtcaacaatctgctccattaaatgggaatattccatgttcttcacccagg
ccttctaaaacacatgtgtctgcagagcctcagggcaatgcagacataccgaggttgacg
ccaattggtagggaaggtgaagaaaccaagcaaacggccagtgctgattatattccactt
ttccaaagagagggcagatctgcttctaggactgaccaaccatcaaaatgcctgctgaag
agtagaaaagctgtgttgccttcagaaattcgccgtcgggagagaagtgtagatgacacc
atgcagagacacactgaggaagttttggagggtaggagaagcagaagaatcagccagtta
gaagagtttaatcgagcaggtgaagtgagtgtcagccagttagatgtggaggcagataaa
ggcagaagcaggctgagcagctttggggagagagaaggacatgatgagagaagagtcagt
ccattgggggaggaaggaagtaaaggagaaaataagaccaaccacatgcagaacagagca
gtccatgatgatgggaaaacaagcaagtctcaagaaagagtgggattgggcagcaaaaag
agaatgcagggagaaaatgttgggtatgaaaggatagaagggaacgagaggtgggatgat
tgtcaaataagcaagttagctcaaattcagcatcatggtgataaacaattcggtggtatt
ataggaaagtcagagagaaaattacagaactttaaaccccttgaaggttcatcgaagcag
gttggtaactgggtcagcaaatctgatgtaccacaaggctttgagaaagtacctactcaa
tttgagataaaagatgaacaaagtgtaaggagaatggcatcgattgagaaagtggagcta
aatgaatccaggaacttaaaggttgatgtagaaaatagtgaacgtcaaatgatggtccag
aaagatgtgtcagaattgcagtgtagacgaaggaggaccagccagccagaggaagatgag
gcacatttcaggcacagaaagctaagccaatctgaagaagattggaaaggacgtagggtg
cgtaggatcagtcagtcaggtaggtgggatgggcaagatcaaattggccatacagctggt
cacatggaggaagatagacataagaagataaatatggaaattccaaaagcaatggatacc
acaccaacacaacaggagggcaatgaccaatctgtgcatcacagactggatgaagcaggc
tgttacttacagagcggttcctccctcccacaggcccgccacagaagaagcagggatgac
ctcaaaccaaaagtccggactcgctctatgtcagatattggagtggcacagcggtctgca
gcaattcgttgtcttgatcgtgctgcgagtcgagaatccattatgccaacagggattggg
cagaatgttagggagacgggagccaccaatggtgaagtaggggctttggatacaagagtt
tctgtggcaaagttaaggcattcctatctggagaatgcctcaggacacaggcctgaatta
agtgagtctaagatagacactgctgccatggagactgacccagcagaggttgttgaacaa
gaaaaagggcagcgtcgacctagacggtatatcaatcctggtgatgatcgcaagtcctct
gaaaggtttagaacccaaccagtcacatcagctgaaagactacattctgataggtccctg
gaactccataagacagaagtggatgaagagaagttggatgagcgagcaaaaatgagtgtc
gcagccaagcggtccctgttcagggagcttgaaaagactgcagaaagtggtgttcccaaa
cctcggtctcgtaatgcagcggtggaacggaggctcaggcgtacactggaccgttccaga
acccaacctgttaccacagaagaagtagtcattgctgcaacttctcctggtccccccacc
caaatcgccactgttcaaaccacagcccccaggtttcccagtcccacagtagtcagcacc
acaatgactaacttcagcatgaagactccctcagcccctgattctgctccacaggagaag
gaaaaggaggtgtcacaaggagaagtagggacgggagaaagagcaggggccgaggagcct
gacctgtcaacgctgagcctttcagagaaaatggctctgtttaaccgcctttcccatcct
cctgcccaaaaagcagaggacgcatgcccagatacacgcccacgcaggagaaatgcccgg
ttccaaactcagcccatcacccaagaagaagtaaatcaggatctaatgcagactatagat
ccatcagatcacacaggttttatttccatgcctgatgggtttgtagtaccaccccatggc
aatcaactgcagaatggaggtcttaagttggagcctctctctgcatcgttgattcgttct
gttgctgcggtcaccgcccaggcttctgttgccatggtgacaaacctgtcagtggcgatc
cctgcagatgttcacacagagacatgcccagccctctctcgcactcctactccagcagca
ccgcccaatctggtttcatccaatcactcaccccacgataagcttccagcttatgagaga
ggtgttcgatatttcagcttgacagagagtggagaaaactgtccccctgagatatgctct
ccgcccccctctgaggagccgatccaaccaggacaaagcaagggcttggctgctagagta
tcagccagtgagcagaaacaggaggaggactatatgtatagacttggtttggcagaaatc
ggggaatccaagaaccctcgtgtgtttaatcagagcacacatacacacacacactctcac
actcatggagagagggaggcggggctgactgacaagaaagagagagagcagagagagtat
gacagagtgagactgcaagactgggagagagggaaagacaagatccctatctcacaaggt
tacctctcaccagacgctgttcagacagcctcagatgctcctgagattggtccatctgtg
tttcctgtgagcactgcagttgtttccctccaaagtacttcacgcacttcgactgctcct
tcacactcactcacatacctgcagcacagttctcctccaatccaaagctcttttcacatt
tcccctcaaacctcacctcagactcatcccaaaccacagccatacctccaatctcctcca
ccacccgaagcacaaatctactcagaatcttttggacagatacaaaccaaagtatctcct
cagtcaatcaatccaaatcagtcttattcctacacccctcctcagactaaggtcccacct
cagacgcaacctaaaccccagtacattgtaccaagttgtgtccaggcttctcctgtggct
caagaagaatcagaaacgatgacatcaatgtctattaaagagaggttagccttgttgaaa
aagagtggggaggaggattggaaaaacaggatgaacaagaaacaggaggttgtgcaggaa
gtcgcatcaatgagcaaccaaatatgggaagaacaaagcttcaagaagaaggaagagagg
gctgttattgaggagtttgcctcatctgaacaggtttgggagcctgtttttgcttccacc
tattcccctcctcctttccatcccaccccaaaatgtcagcctgtagaccatccatgccag
agactgggagaaggaatagagggacagatgtccattgaagaacgaaagcagatgatctct
acacgagaagaggcatggcaaagcactggaaagggtgtagcaaatgactctggccagtat
actgtggctgctcggatggtgaagaaaggacagatctacgaaagttcgggtctagctgct
tcatctgcagtgatcagacccattctgtctcctgtctctgcaaagctaaaaaatggagtg
ccagctatctctaaaccacaggaggatattgaggtcacagcagatatggaatctgacaag
aaactggataagctggagacgtttttgggaaggttgaacaataaagtgactagtttgcag
gagacgactctcacagtgactgaaaaggctgtgaaagaagtaatgagactggacgatgaa
atcttctcaaagttttatcggcatgtgacggacatcccacgcagcatgcccagagtgcca
atagatgatgactttgatgccatatttggcaaacacacgccaaagctggcatcagcaatg
gtgcatcacaagagagcaatacgtcctttgcgtaacgttcaggcatcacgtaacccacta
aagattctggcagcccgagatgacattaggcacgagtacaccgagcagagactcaacatc
ggtattctggaaagcaagagggtgaaacaggagaaaataagtaagagcaccagcatttca
gatgctgctctggctggtttggctagcaaggagaactacagcagtgtgagtttacgcagc
gtcagcgtgtctgagcaggtgaccaacaacagtgctgctccctacaaaaagctcatgctc
atgcaagtcaaaggacgtagacatgtccagacaagactagtggaacccagggtctcgtct
ttgaacagtggtgattgttttctgctggttactcctgagaactgttttgtttggatagga
gagtttgcaaatgtcatagagaaagcaaaggcatctgagctggccacttttatccagttg
aaccatgacctcggttgccgggcaacgcaagtggacaccattgaagagggggtgaatcct
gaaagccctgctgcagctgagttttggaaaattctaggaggacaagccagctatcagccc
tctggaaccccagaagaggacgagtgttttgagagtgcgattgtagagacaaattgcatc
tttcgtttggtggatgataaattgcttcctgatgatgatttctggggtaaagttcctcgt
tgctcactcctggggtccaaagaggtgctggtattagattttggcagtgaggtgtacgta
tggcatggtaaagatgtcacactggcacagagaaaggtggctttccagctggctaagcac
ctgtggaatggcatctttgactacactaactgtgacatcaacccactcgacccgggagga
tgcaattcactcatacccagaaaaggtcaaggccgtccagactgggcgatatttggcaga
ttgactgaacacaatgagacatctttgttcagagagaagttcctggactggagagagagc
actgattcacttccaaagagcagcagtgaacattcctttgagcagaagcttgccctaagt
acaccctctcgtctggagtctgctgcttatgatgtggggttgatgctcccagtgctccag
tcccccatcagcatggttctggaagggcagaacgttggccgcggtcatggcccagttgaa
agcggatgttctgaggaccatctgcgctctctggaaattagcacgctcagtgtggatgtc
tggcacatcctggaatttgattatagtcggctgcccaagcagagcattggccagtttcat
gaaggagatgcctatgtagtgaaatggaagtacatggtgagcgtagcagtgggcaacagg
cagaagccagagcaggttcgcagtgctggtccagggcgagagaagtgctgctatttcttc
tggcaaggcaggaactgtacagtcagtgaaaaaggaacttctgcattgatgaccattgaa
ctggatgaggagagaggagcacaggtgcaggtgcagcagggcaaagagccaccatgcttc
ctgcagtgcttcaatggtggtatgattgtgcattgtgggaaaagggaagaagaggaagag
aacgttcagagtgaatggaggttgtactgtgttcgtggtgagataccagttgagggccat
ctgctggaggtagcgtgtcactgcagtagtctacgctctcggacctcaatgattctgttg
aacgttaacaaagcccttatctacctgtggcatggctgtaaggcacaagcacacacccgc
gcagtggcaaacacagctgccgaaaagatcaaagaacagcgtccactggaggcaggcctg
cacagcagctgcaacctcaccatatatgagtgtgaagaaggggcagagcccatggaattc
tgggaggcgttgggcaggaaggaccgtaaggcctatgactgcatgcttcaagatccagga
aagtttaacttcactccacgtctcttccagttaagtagttcttcaggtgagtttgtggct
cagcaattcttctacccatccagaactccagacctggtcagcgcgttccccttccttcag
gaagacctgtattctgcaccacagcccgctctgttcctggtggataactatcacgaggtg
tacctgtggcagggctggtggccacaagacacagaaacacccggttcagcccggattcgc
tgggatgctgacaggaaatgcgccatggaaacagtgctgcgttactgcagagaaaagaat
gagcaaaatcctcagaagtcatatttgatccatgctggcctggagcctcttacatttacc
aacatgttccccagctgggagcatcgggaggaaatcacagaagtcatggaagaggaggga
gagatgtgtaaccagatcaccctggtggaggatgttttggctcgcctttgtcaaagcatt
tatcctcttgcagcactgcagagtcggccccttccacacggtgtggaccctctgcgcctt
gaaatctacctatctgatgaggactttgagaaagccctggagatgaagagagaagattat
gaagccttgccagggtggaaacaagtcaacctcaaaaaagccaaaggactcttttaa
DBGET
integrated database retrieval system