Silurus meridionalis (southern catfish): 124402987
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Entry
124402987 CDS
T08004
Symbol
sall3a
Name
(RefSeq) sal-like protein 3
KO
K19871
sal-like protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124402987 (sall3a)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124402987 (sall3a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124402987 (sall3a)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
124402987 (sall3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_15
TDBD
zf-C2H2_11
IZUMO
UBZ_FAAP20
zf-H2C2_5
NinF
DUF2225
Motif
Other DBs
NCBI-GeneID:
124402987
NCBI-ProteinID:
XP_046732455
LinkDB
All DBs
Position
20:complement(16780179..16801122)
Genome browser
AA seq
1333 aa
AA seq
DB search
MSRRKQAKPQHLKSDEETSALGLAPENASGEILDDADSGNESRSGSEETHVCEKCCAEFF
KWSDFCEHLKSCTKNPLVLIISENEVTPDLTQEYPTEPSPVPSCPSEPADSEEAAEGRHS
PAEVDDGAEMTLEQMTTLDKEDEPMDVEMSPEKTLDHEDPDISPEPDVSLPQLDTAQTSR
TVYSIPSTNVTLETLHGTRVAVAQFAQSFRGAIASGMSTMAIPMILDQLMALQQQQIHQL
QLIEQIRSQVALMNRQKPAQAALSHHAHHNTNSGPQPSSATGLPTIPGQLQLHGFITPPV
HQLPIRVPPTLNTQGPVSLSSALEVGHSHVSQTGSQLSNSLMNSNTSTNSSYPPSSCSVV
PSLLPLQSSVSSSSSSNSCSNGAGTGISSSVSLPRNTSSPPTLTHGTLLSSPSNLPLMPP
SSSSSVIFPNPLASIAATANALDPLSALMKHRKGKPPNVSVFDPKPSSEDPFFKHKCRFC
AKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIPMNPYPVP
EYLDNVPTSSGIPYGMSLPPEKPVTTWLDSKPVLSTAPTSVGLQLPPTLPSMIGGYGDSP
SLTPISRSPPRPSPPSSECASLSPNVISTEVSTTLTSASPQPTMGSDVPPVLKPEGIHLP
SNCTTRLGETSMPSSTVSQIVLSSTTTTTTTTTTQITDSLTPPSSGSNSALPMISDQFKA
KFPFGGLLDSMQTSETSKLQQLVENIDKKMTDPNQCVICHRVLSCQSALKMHYRIHTGER
PFKCKICGRAFTTKGNLKTHFGVHRSKPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQ
IPNTPLPEGFKDMDTDFNFDEKSVDNMSNYDDELIDEMEQAIDDDVDLRDGDIDLSKPLH
LYGDMSPSNSPPTPVISSIAALENQMKMIDSTANMNRAFSLKPSENGGGISGESGDVFNN
DSSSAMGDIESHSVGSPALSESSGSMQALSPAHSQPESHRSRSPGMVNNNNSNEDDDVQD
SGVATATVKSEKSDTPSPGSLPADHTGVLDLTSAQPASRPYVKEENQFSMLFLGRDRGLT
PLSLMSSAPGLVKLEMNGHSKPLSLSEGSHLHMGLQVPATAPQTTMSPGLNPMLAPPPPR
RTPKQHNCHSCGKNFSSASALQIHERTHTGEKPFACSICGRAFTTKGNLKVHMGTHMWNN
APARRGRRLSVENPMALLGGDAMKFSEMFQKDLAVRAMNVDPGFWNQYAAAITNGLAMKN
NEISVIQNGGIPPLPVSLGGGSIPSLASMSGGMERARTGSSPPMTGLEKTSLELGTGRPF
SRFLEDNKEIGIN
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacggaaacaggccaagccgcagcatctcaagtcggacgaggagacctcggcg
ctcgggctggccccggagaacgcctcaggtgagatcctggacgatgccgacagcggtaat
gagagccgcagcggtagcgaggagacccatgtgtgtgagaaatgctgcgccgagttcttc
aaatggtctgacttctgcgaacatctgaagagctgcaccaagaacccacttgtgcttatt
attagtgagaatgaggtcacaccggacctgacacaggagtacccaactgagccctcaccc
gtgcccagctgtccgagtgagcctgcagatagcgaggaggcagctgagggcaggcacagc
ccagctgaagtagacgacggtgccgaaatgactttggagcaaatgaccacccttgacaaa
gaggatgagcccatggatgtggaaatgtctcctgagaaaacactggaccatgaggatcca
gatatatcaccagagcctgatgtcagcctaccccagcttgacacagcccaaacatctagg
acagtttacagcattcccagcacaaatgtcactctggaaacattgcatggaacccgagtg
gctgtggcacaatttgcccaaagcttccgtggggcaatagctagtggcatgtccaccatg
gccatccctatgatcctggatcagctgatggctttacagcagcagcaaattcaccagctt
cagctaatagaacagatccgtagccaagtggccctaatgaacaggcagaaacctgcacag
gcggctcttagccatcatgcacaccacaatacaaatagtggcccacagccatcttctgcc
actggccttcccacaatccccggtcagctccagctacatggatttattacaccacctgtc
caccagctccctataagggtgccacctactttgaatacccaaggcccagtctcattatct
tctgccttggaagtgggtcactcccatgtctcacagacaggtagccagctgtctaattct
ttaatgaacagcaacacctcaacaaattcctcatatccaccatccagctgtagcgtggtt
ccttccctgttgccacttcagagttcagtaagtagcagcagcagcagcaacagctgcagc
aatggtgctggaactggcattagtagcagcgtttccctccctagaaacacgtcaagtcct
ccaacactgactcatggaaccttgctgagctccccttccaaccttccgcttatgcccccc
agttcctcaagtagtgtcatcttcccgaatccactggccagtattgcagccacagccaat
gcacttgatcctctctctgccctaatgaagcaccgcaagggaaaacctcctaatgtctct
gtattcgacccaaagccgagctcagaagacccattctttaaacataaatgtaggttttgt
gctaaggtgtttggtagtgacagtgcccttcaaatacaccttcgttcacatactggagaa
aggcctttcaagtgcaacatttgtggtaatcgcttttctacaaaaggaaacttgaaggtc
catttccagaggcacaaggaaaagtacccacacattccaatgaatccctatccagtgcct
gagtacctggacaatgtgccaaccagctcaggcattccttatggcatgtcgctgcctcca
gagaagcctgttaccacatggctagacagcaagcctgttttgtccacagctccaacctca
gtggggctgcagcttcccccaaccttgcccagcatgataggggggtatggagattcacca
agtcttactccgataagcagatcacctccaagaccatcacccccatcaagtgagtgtgca
tctctgtcacctaatgttatcagtactgaagtaagcacaactctcacttcagcatctcca
cagccaaccatgggaagtgatgtacccccagttttgaagccagaggggattcatttgcca
tctaactgcaccaccaggcttggggagaccagcatgccctcaagtactgtgagccagatt
gtgctgtcatccacaaccactaccacaaccactaccaccactcagatcacagattcattg
acccctccgtcctctggctcgaattctgcccttccaatgatttcagatcagttcaaggcc
aagtttccttttggaggcctcctggactctatgcaaacatcagaaacctcaaagctgcag
cagctggtggaaaacattgacaaaaagatgacagaccccaaccagtgtgtcatctgccat
cgtgtgctcagctgtcagagtgccctcaagatgcactatcgtatccacactggagaaagg
ccttttaaatgcaaaatatgtggccgtgctttcactactaagggcaacttgaaaacgcac
tttggggtccacaggtcaaagccacctctacgagtgcagcactcatgtcctatatgtcag
aagaagtttactaatgctgtagtgttgcaacagcatattcgcatgcacatgggaggtcag
attccaaacacaccacttcctgaagggtttaaagacatggacacagattttaactttgac
gagaaaagtgtagacaacatgagcaattatgatgatgagctgattgatgagatggaacag
gccatagatgatgatgtagatctcagagatggagacattgacctatcaaaaccgttgcat
ttatacggagacatgtctcctagcaactctccgccaactccagtcatctccagcattgct
gctttggaaaaccaaatgaagatgattgactcgacggcgaatatgaaccgcgcctttagt
ctgaagccctcagaaaatggaggtggaatcagtggagaaagcggagatgtttttaacaac
gactcatcctctgccatgggagacatcgagagtcacagtgtgggaagtcctgccctgtct
gagtcatcaggctctatgcaggctctatctccagctcatagtcagcccgagagccatcgt
tccaggtctccaggtatggtcaataacaataacagcaatgaggatgatgatgtccaggac
tccggtgtagccacagcaactgtgaagtctgaaaagtcagacaccccatctccaggttct
ttaccagctgatcacactggtgtgctagacctaacatctgctcagcccgccagcaggccc
tatgttaaagaggagaaccagttcagcatgctgttcttaggaagagatcgaggtttaacc
ccattaagcttgatgagctcagccccaggcctagtcaaactcgagatgaacggccacagc
aaacccctgtctttgagcgagggctcgcacttgcacatgggccttcaggtgccagccaca
gcacctcagacaacaatgagtcccggtctcaacccaatgctggcaccgcctccaccacgc
cggactcccaagcagcacaactgccattcttgtggaaaaaacttctcctccgccagtgcc
ctgcagatccacgagcgcacacacaccggagaaaaaccctttgcctgctctatctgtggt
agagccttcaccacgaagggcaatttgaaggttcacatgggcacccacatgtggaacaat
gccccagccagacgggggcgacgtctctcagtggaaaaccccatggccctgttgggtggc
gatgcaatgaaattcagcgagatgtttcagaaagacctggcagttcgggcaatgaatgta
gacccagggttttggaaccagtatgctgcggccatcaccaacggactggccatgaagaac
aatgagatttccgtcatccagaacgggggcattcctccacttcctgttagcctcggaggg
ggcagcataccgtctctggctagcatgtcagggggtatggagagggcacgcacaggcagc
agtcctccaatgactggcctcgagaaaacaagcctagagttgggaactggacgtcccttt
tccaggttcctggaggacaacaaagagattggaatcaattga
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