Silurus meridionalis (southern catfish): 124402990
Help
Entry
124402990 CDS
T08004
Symbol
rreb1b
Name
(RefSeq) ras-responsive element-binding protein 1
KO
K20210
ras-responsive element-binding protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124402990 (rreb1b)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124402990 (rreb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-H2C2_2
zf-H2C2_5
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-Di19
DUF629
zf-C2H2_7th_ZNF462
Actin_micro
zf-C2H2_8
zf-C2H2_REST
Motif
Other DBs
NCBI-GeneID:
124402990
NCBI-ProteinID:
XP_046732456
LinkDB
All DBs
Position
20:17013111..17055770
Genome browser
AA seq
1650 aa
AA seq
DB search
MEIALPEKRCVEDGKASQQPEEFSTPMEEEPEGEPDQLREPGKENGTEEEREEEGTEHQQ
EEQENKEVDGESCANSTKHTETNTGQMNGDADTAASNTSPKTPSKSPSANRTGRKNQEVK
DRSTFICPLCDKNCQTQHHLTMHIRQHNTQTGGTDHSCSICGKALSSASSLDRHMLVHSG
ERPYKCSVCNQTFTTNGNMHRHMKIHDKGSNGVSAMRPISPSKRRKALKRKLSTEEDGEK
TNEPPNKKLMVVNESGEQNPAKHEEDLLHCPICFKTFICKYGLESHMETHPDTALRCNLC
CITFRTHRGLLCHNSIIHKQLPTDPNGRPFIQSNPSIPQGFSDLSFIDFSCTKFAQIAQV
WCETNLRRCTSKFHRFICDVCNKAFPLQVSLDLHVKSHKDHKVKPQKQEKDTISNTAKDP
VDSKEIAESPPLESSVTLNGKKNFMECLGLQHSSFAKPEQSEEKKQQEILDRIHFIRVEP
SATNLPQEANSSLGLCLLDPVSLQGLNKGNGLSLLSLQPLQGSLVVRPVSQTVELADIQQ
ILKMAAAMPSQLTLPLLPKSPLQAEPKQITPLKSKPLVTPRSSMGTSTPPPPVMNAQQAS
SGCISPSLPPPAAQLVTSKQSSITPSSSTSSSPTNWENTHLVGDGTGSTIMTTGDIKQEE
VQGKEKDTRSSGGKKFPKTEYPCRFCTQVFPLPGGLQAHMRAHHYGASPYKCSICTYTAP
DNATLMRHLRTHSGERPYVCRLCHYPFTVKANCERHLRKKHMKNTRKEIEKNIEYVTPSL
STSSLVGGTAQDPVDSANIGNTYCRYCGEDLKTYRALQIHLRTLNGCQRKPFECRQCGAV
FLAKRNCIHHLLKQHTEVQEREIEDHINILVPVTAPSSVQSNSLAQPQSGTQNLITFSGL
AVQDQPLDFSSKTMKTINSDIKPEAASPSLSNDCSMEPIDLSIRKSPEAKKIKTEQVEMT
PLFLQEIKKELSTVTTSKIVGKVSGVHASLPASMPSLASTLTSDLTKPPVRLKPLLPKPV
AASNTLEMPPLASIAQIISSVSAAPVLLKTGINPEKKHGLMGGETLIDKKCSNGTASRGS
SYSFPTLNASKRRGKKRPFKDEICDSTQASISAFDLECSGELPSVEKMLATTDANKFSSY
LQLRQMDPEKEKQSASEEEKEGKEGKEKIRPRSKGKKNAYSNSVQKMKCPYCPRVFPWTS
SLQRHMLTHTGQKPFPCPQCDAFFSTKSNCERHLLRKHGISNRNTLQNSGSHPKTKTDEG
SQESTDCISDAEPAFMIDPVDPPKEDKTPTIEMDLPEQDQDITMESSELKEDLECAQPVE
DLLMNTNNNENNDDSQSNKSLDLNVTSKPTELSEPEQEQPEAIEPAVAPKSPPLEEFPHT
CNTCKKTFRQAATLIRHQKIHLQDKPNEDGGRKGRNQAAISLDTSTSPVKEPEQETGVAE
REENSSIAESGAEEEEKEEQKEEKNEEEEGGSSELESAGGRPDKRKKICNVCGKRFWSLQ
DLTRHMRSHTGERPYQCQTCDRTFTLKHSLVRHQRIHQKTPDDRGADEADGARDDSVVDG
EDLRCTSGSESETVPAENETSKTEDLKRAEEPVEMEDNTGVKEEQGSTEEASKKLQTKEH
DELDTKTPEPKDSADLSLKDNQGDEEKPDV
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atggagattgccttacctgaaaagaggtgtgttgaagatggcaaagcctctcagcagcca
gaggagttttccacaccgatggaagaggagccagagggcgaaccggaccagctcagagag
ccgggaaaggagaacggaactgaggaagagcgagaggaggaagggaccgagcaccagcag
gaggaacaagaaaataaagaggtagatggggagtcttgtgccaactctacaaagcatacg
gaaacgaacactggccaaatgaacggggatgcagacacggcagcctcgaacacatcccct
aagacccccagcaaatctccctccgcaaatcgcacaggcaggaagaaccaggaagtgaaa
gatcgctccaccttcatctgccccctgtgtgataagaactgccaaacgcagcatcatctc
actatgcatatacgacagcataacacacagaccggggggactgaccactcgtgcagcatc
tgtggaaaggcgttgagttcggccagctctctggatcgccacatgctggtccacagcggt
gagagaccctacaaatgctcggtgtgcaaccagacatttaccaccaacggaaacatgcac
agacacatgaaaattcacgacaagggctcaaacggtgtctcagccatgcgtcccatttcc
ccgagcaagcgccgcaaagctctcaagaggaagctcagtacagaggaggatggtgagaaa
accaatgaaccacccaacaaaaagttgatggtagtgaatgaatcaggggagcaaaaccct
gccaagcatgaagaagacctgttgcactgtccaatctgcttcaagacattcatctgtaaa
tatggtttggagtcacacatggagacccatcctgacaccgcactcaggtgtaacctgtgc
tgtatcactttccgtacccatcgaggtctcctttgtcataattccattattcataagcag
ctgcccaccgatcccaatggacgaccatttattcagagcaacccttccataccccaagga
ttcagtgacctgtccttcattgacttttcttgtaccaagttcgcacaaattgcacaggtc
tggtgtgagacaaatttgcgacgctgcacaagcaaattccataggtttatttgtgacgta
tgcaacaaggcctttcctcttcaagtgtctctagatctccacgtaaaatctcataaagac
cataaagtcaaaccccagaaacaggaaaaggacactatttcaaatacagccaaagacccc
gtggattccaaagagatagccgaatcaccacctcttgagtccagtgtaactttaaatgga
aagaaaaattttatggagtgccttggtcttcagcattcttcttttgctaagcctgagcag
tccgaggagaagaaacagcaagaaattctagaccgaattcattttattcgagttgagccc
tctgcaacaaatctacctcaagaggccaacagtagtcttggcctctgtcttcttgatcct
gtctctcttcaaggtttgaacaagggcaatggtctgagccttctttcactgcagccactt
cagggtagtttggttgtccgtcctgtcagtcaaacagtggaacttgctgatatccagcaa
atcctgaaaatggctgctgctatgccatctcagttgactttgccactgcttccgaaaagt
cctcttcaggcagaacccaaacaaattactcctctcaaatcaaagccactggtgactcct
cgatccagcatgggaacttccacaccacctccaccagtcatgaatgcccagcaagcctct
tcaggttgcattagccccagcttgccaccccctgctgcccaacttgttacgtccaaacag
tcctcaatcaccccatcttcctcaacgtcttcctcacctacaaactgggaaaatacacat
ctagtaggagatggcacagggtcaacaattatgactactggggatattaaacaagaagag
gtccaaggaaaagagaaagacacaagatcctcaggcggcaaaaagtttcccaagacagaa
tacccatgccgcttctgtacacaagtgttccccttgccaggaggcctccaggctcatatg
cgggcccatcactatggagcttctccctacaagtgtagcatctgcacctatactgcccca
gacaatgccacgttaatgcgccatttacgaacacacagtggtgaacgtccctatgtctgc
cgcctctgtcactaccctttcacggtcaaggccaactgtgaacgtcatctgcgcaagaag
cacatgaaaaacactcgaaaagaaatagagaaaaacattgagtacgtcaccccatcctta
agcacaagcagtttagttggtggtactgcacaggaccccgtagattcagctaatatcggt
aacacatactgccgctactgtggagaggacctgaagacctacagggctctacagattcat
ctccgaactctcaatggctgtcaaaggaaaccattcgaatgtcgccagtgtggagcagtt
ttcctggccaagaggaattgtatccatcacctgcttaagcaacacacagaagtgcaagaa
agggaaatcgaagatcatataaacattcttgttcctgttacagctccttcctctgtccag
tccaactctctggctcagcctcagtcaggaacacagaaccttattactttttctggactt
gcagttcaagaccagcctttggatttctccagcaaaacaatgaaaactattaattctgat
ataaaaccagaggcagcttctccctctctctcaaacgactgctccatggagcctatcgac
ctgtctattcggaagagtccggaagcaaagaaaattaagacagaacaagttgagatgact
ccattgtttctccaggagatcaaaaaagaactttctactgtgactacaagcaagattgta
gggaaggtctcaggtgttcatgcatctcttccagcatctatgcctagtcttgcctctact
cttacaagtgatttgaccaagccacccgtacgcctgaagccgctgctgccgaaaccagtt
gctgcctccaacactttagagatgccacctctggcctccattgcccaaatcatctcgtct
gtgtctgctgcccccgtgctgctgaaaacaggaataaatcctgagaaaaagcatggcttg
atgggtggggaaacactaattgacaaaaagtgttccaatggcacagcgagtcgcgggtct
tcttacagttttccgacccttaatgcatcgaagaggagaggcaagaagaggccattcaag
gatgagatatgtgattctacacaggcgtcaatcagtgcctttgacttggagtgtagtgga
gagttaccaagtgtggagaaaatgctagccactactgatgccaataaatttagctcttat
ttacagctgaggcaaatggatccagaaaaggagaaacagtctgcaagtgaagaagagaag
gagggaaaggaaggcaaagagaagattcgaccacgaagcaaaggaaagaagaatgcttac
tctaactctgtgcagaagatgaaatgtccatattgtcccagagtgttcccttggaccagt
tctttacaaaggcacatgctaacacatacaggtcaaaagccgttcccttgtcctcagtgt
gatgcgttcttctccaccaagtctaactgtgagcgccaccttcttcgtaagcacggcata
tccaatcgcaacacgctgcagaactctgggtcacacccaaagaccaaaacagatgagggg
tcacaggaaagtacagattgcatttccgatgctgaacctgctttcatgattgatcctgtt
gatcccccgaaagaggacaaaaccccaactattgagatggacctgccggagcaggatcaa
gatataaccatggaatcatcagagttaaaggaagatctagaatgtgcacaacccgttgag
gacctcctaatgaacacgaacaacaacgagaataacgatgactctcagagcaacaagagt
cttgatctgaatgtcaccagcaaacccacagaactctcagaacctgagcaggagcagccc
gaggccatcgaacctgcagtggcaccgaagagtcctcctttagaggaatttccacacaca
tgcaatacttgcaaaaagactttccggcaagcggccacccttattcggcaccaaaagatt
catctacaggataaaccaaatgaagatggaggaaggaaaggaaggaaccaggctgcgata
tctcttgacactagcacctcaccagtaaaggaacctgaacaggagacaggtgtggctgag
agagaggagaacagcagcattgcggaaagtggcgctgaggaagaggagaaggaggaacag
aaagaggagaaaaacgaagaggaagaaggtggatcctcagagctcgaatcagcaggcggg
agacctgacaagaggaagaagatctgcaatgtgtgtggcaagcgtttttggagcctgcaa
gacttgacgagacacatgcgttcacatactggagaaagaccttatcagtgccaaacatgt
gaccggacttttactctaaaacacagcctggttaggcaccagcgtattcaccagaaaacc
ccagatgaccgaggagcagacgaggctgatggagcacgagacgacagtgttgtggatggg
gaagatctacgatgtacttccggaagtgagagcgagaccgttccagccgagaacgagacg
tccaagacggaggacctcaagcgagcagaggaacccgtagagatggaggataatactggg
gtcaaagaagaacaaggatccacagaagaggcttccaaaaaactccaaacaaaggaacat
gatgaattggataccaagaccccagaacccaaagattcagcagatctcagtcttaaggac
aaccagggagatgaagagaaacccgatgtctaa
DBGET
integrated database retrieval system
