Silurus meridionalis (southern catfish): 124402998
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Entry
124402998 CDS
T08004
Name
(RefSeq) LOW QUALITY PROTEIN: piezo-type mechanosensitive ion channel component 2
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124402998
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124402998
Membrane trafficking [BR:
smeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
124402998
Ion channels [BR:
smeo04040
]
Other channels
Mechanosensitive channel (Piezo)
124402998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
FAM210A-B_dom
AAA_11
Motif
Other DBs
NCBI-GeneID:
124402998
NCBI-ProteinID:
XP_046732472
LinkDB
All DBs
Position
20:complement(6725369..6801130)
Genome browser
AA seq
2905 aa
AA seq
DB search
MASEVVCGLIFRLLLPFCLAAACLFRYNWLSFVYLIYLLLIPLFPEPSITTMHSHTGRLL
KSLCFTSMTFLLFHIIYQITVNSLLARNNIDPSFNCSVWEKSIRQIGFESVIGADVGNGI
RVFLPDIGMFMAGLGTLLLCRSLEKKRPVEEMAQYNQDFDAEEQEESDEKRIPDDEEVEE
MLYDEDFDAEDEAEDEDEGMLEDEEEEEEEEEEEEKESAKMKVLRIVAEVASKMKDIIGN
IITTAGKVVVTTLLGLTGMMLPSLTSAVYFFIFLALCTWWSFCQTFDTLLFSCLCVLMAI
FCAGHLIVLYLYQFQFLQESIPPNDSYISLFGISPIIKTNCSSTWKLIVYPDLNWHHFVN
PIMLLVLYYTLATLIRLWLQDPMITENEEEEVNEDNERPTAEKRRQLWWTARQKTEEKNL
LSTQDAYSTTEAVLMNSNGTSFGYVPTLNAENGPVSLDLFSIPKYKVDESNNIEDEKDGE
VYKVVEMPPEEEEESKESEEKEPSGAPAGLVKVFRFIMKQSYVCALIAMMAWSITYVSWL
TFVFLMWSCTLWMVRDRRKYAMLTSPFMVAYGNLVIVLQYIWSFESLNSVPGLFLKPDVP
FNQLWSKVLYLLSFWLLLHQTLTERQDKLKEEATLSEVSVDSGKKEVEKPEEEEEEGSEN
DLMHMVGNLVMGMLVKYWIYICGGMFFFVSFEGRIVMYKIIYMMLFLFCVALYQVHYEWW
RRILKYFWMSVVVYTMLVLTLIYTCQFDNSINVWSNMTGMSEEKLKDLGLERFSLGILFT
RIFIPTSFLLVCILHLHYFHEHFLALTDLKAVAAKQDNAIYRLAHPDGSLADLTMMSSSP
ESLVDKEKEMLVVESMADEKKKEEENSIHDESQQCSAATDPEIPSEESSDLKNKWHLVVD
RLTVLFLKFLEYFHKLQLFIWWLLEMHVIKIVSSYIILVSVTEVSLLNYVFLASWAFALP
YHQFRHMASSICTVWTCVIIICKMLYQLESIDPDTYSSNCTMLMNYTEKERNYMKSSLLY
EKPVDPANWVGLEKFPSLLPNLRNNLLMLAILAFEVTIYRHQEYYRLRNKLSPPPFRIIF
HEITRQHLDNSIINCAKYFINYFFYKFGVEVCFLLAVNVIGQRMDFYSMLHAVALAAVMY
RRRRKAIAEIWPKYCCFLACMITFQYFVCIGIPPAACKEYPWRFPNSSTDSNVIKWLFLP
DFHTKPNPKFLIYDFMLLLSASLQGQVFDEENKAAVRLMAGENVEICRDLDAASFSVHNP
VPDFIHCRSYLDMLKVIMFSYLFWFVLTIIFITGTTRISIFCMGYLVACFYFLLFGGELL
LKPIKKILHYWDFLIAYNVFVITMKNVFSILACGYINKLKLNCCWLIQLLSLACTIKEYE
DLPVSSFECDLPKDEAGIIWDSICFSFLLLQRRVFMSYYFLHVVADIRAGQILASRGAEL
FQASIVKAVRARIEEENKSMEQLRRQMDRIKTRQEKFKKGKEKMLSLTQESTESQTIFPP
EAGEEDEDDDGAEKEKAKAKKKQWWRPWVDHASMVRSGDYYLFETDSEEEEEEEEKKDDD
PPKKSAFQRAIGKFASAVLALPKSIIKLPKTILQYLIRAAKFVYQAWVTDSKTALKERGK
ERRHFWKRYGRGRKHRKDNDEGQVAIEMGDDEQQSSEEDKKEGPDNIIKRVFNIIKFTWV
LFLTTLESLTRWINNICKEYIDISTVLRIERCMLTREVKKGNVPSRESIHVYYQKQMRLN
VSRESGLDQISEEDSGSQKLRRRRRGYTLESQDSVASRDSISSAYTEATMLFSRQSTLDD
LDDVXHHVPKTSERARPKLRKMYSMDMSNSSADSGSSNISSEATQCVTLFSRQGTNDTID
EVEDEQDQSHHRDKRLEQVEEAKTGPWSSIEPESEQELEKVPELEEEVKPEAAKQFPKDY
EDRLEDDDEAQSPGREDGESSSGPERTSGRLFTPDTDVPNTSDADVPPSYSKAVSFDRLS
VDSQESDEEKQLMLMTSDSRSDLLSDDALLPSQTTELTASELLLNKMFYDEELDGSERFY
KSQPLGLQLCYALYNLLVAHSEMVCYLVIILNHMISASMATLVLPVLIFLWAMLSVPRPS
KRFWMTAIIYTEVTIVIKYFFQFSFFPFNQNLEVDKKKPYHPPNIIGVEKKDGYVHYDLV
QLLALFFHRSILKCHGLWDEDDPKDKETKKDRSQHRDESEDEDKMVVLIPAETKKKSSPP
RSMRFNLGSSTDLDSVQQVQVRQPELRTYQRRKSSSGGSYISRHSSQRSKRGSTSTRNSS
CRGSSEVGVEPKTRKELIMEKLREQLIKAKFFLLKKGREIYLPIRQFFYNLIHPDYSAVT
DVYVLMFLADTVDFIIIVFGFWAFGKHQGGADITSSLSEDQVPGPFLVMVLIQFGTMVVD
RALYLRKTVMGKVIFQVILVFGIHFWMFFILPGITERRFSQNTVAQLWYFVKCIYFGLSA
YQIRCGYPTRVLGNFLTKSYNYVNLFLFQGFRVIPFLTELRAVMDWVWTDTTLSLSSWIC
VEDIYAHIFVLKCWRESEKRYPQPRGQKKKKVVKYGMGGMIVMLLICIVWFPLLFMSLVK
SVAGVVNAPLDVSVSLTLGGFQPIFTMSAQQKNLISITLKDFEDFNKVHSSDSMALQFLE
AYVYQDITIAHLEGSSNSLWTISPPSRENLIKMLEQDKQFHLTIAWSVQRNLSLGAKAET
ATGKHVITLEDDTRQNLVKVLNNQTSSVLITKIFPRYIRAPSDSNAKPIEQLSKDSGLEN
ITLALGRGNSTAGKVQEWWVVNQTKPGKILQKDKEHGKAGLDLYIFSDQVSPPSLGFLAG
YGIMGLYMSVVLVIGKFVREFFSGISHTIMFEELPNVDRILKLCTDIFLVRETGELDLEE
DLYSKLIFLYRSPETMIKWTREKNK
NT seq
8718 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgaggtggtgtgtggactgatcttcagactgctgctgcccttctgcttggcg
gcagcatgcctcttcaggtacaactggctctccttcgtctacctcatctacctcctcctc
atcccactgttccctgagccctccatcacaaccatgcacagccacacggggcgcttgcta
aagtcgctgtgtttcaccagtatgaccttcctcttgttccacatcatctaccagatcacc
gtcaacagtctgctagcccgaaacaacatcgatcccagcttcaactgttcagtttgggag
aaatctatacgacagattggattcgagagtgttataggggcagatgtaggaaatggcatc
cgggtgtttctaccagacatcggtatgttcatggcaggcctgggcaccttgcttctgtgt
cggagtctggaaaagaagagaccagtggaggaaatggcgcaatacaaccaggactttgat
gcagaagaacaggaggagagcgatgagaagagaatcccagacgacgaagaagttgaggag
atgctgtacgatgaggactttgatgccgaagacgaagcagaggatgaagacgagggtatg
ctggaggatgaggaagaagaagaggaagaggaggaggaagaggagaaggaaagtgctaag
atgaaggttctgcgcatagttgctgaagtggcttcgaaaatgaaagacatcatcgggaat
atcatcactacagcagggaaggtggtggtgactacactgctgggcctgacaggaatgatg
ctgccctctctgacctcagctgtttacttcttcatcttccttgcgctgtgcacatggtgg
tctttctgccagaccttcgacacactcctcttcagttgcctttgcgtgctaatggctatc
ttctgtgctggccacctcattgttctctacctctaccaatttcagttccttcaggagagc
atcccacctaacgacagctacatcagcttgttcgggatctctcctataatcaagacaaat
tgctcttctacgtggaagttaattgtctatcctgatctcaactggcatcattttgtcaat
cctatcatgctcctggtgctatactacacactggccacactgattcgcctttggctgcaa
gatccaatgatcacggagaatgaggaagaagaggtgaacgaagacaacgagcgtcccaca
gcggaaaaaagaaggcaactatggtggactgcgcggcagaagactgaagaaaagaatctt
ctgtccactcaggatgcttacagcaccactgaggcagtactgatgaactccaatgggaca
tcttttggttatgtccccaccctaaatgcagagaatggaccggtcagcttggacctcttc
tctatccctaagtataaggtggacgaatctaataatattgaggatgaaaaggatggggaa
gtgtataaggtagtggagatgccaccagaggaagaagaggagtcaaaagagagcgaagag
aaagagcctagcggagctccagctggccttgtcaaagttttccgttttattatgaagcag
agctatgtgtgcgctctcattgccatgatggcctggagcattacctatgtaagctggctg
acatttgtcttcctcatgtggtcttgcactctgtggatggtgcgagacagaagaaagtat
gctatgctaacttcaccctttatggttgcatacgggaacctggtaattgtgctacagtac
atctggagctttgagtctctgaattccgtcccgggccttttcctcaaacctgacgtgccc
ttcaaccagctctggtccaaggtgctgtacttgctgagtttctggctacttctgcatcag
acactgactgaacggcaggacaaactaaaagaggaagcaacgctatctgaagtttcagtt
gattcggggaaaaaggaggtagagaagccggaagaggaggaggaggaaggtagcgagaat
gacttgatgcacatggtgggaaatttggtgatgggcatgctggtaaagtactggatctac
atctgtggaggcatgttcttcttcgtgagctttgaaggacgtatcgtcatgtacaagatc
atctacatgatgctgttcctcttttgcgtggctctttatcaggtgcactatgagtggtgg
agaaggattctaaaatatttctggatgtcagtggtggtgtacaccatgctggtcctcacc
ctcatctacacctgccaatttgataactccatcaacgtctggtccaacatgacaggcatg
agtgaggaaaaactaaaggatctgggtctggagaggttttctttgggtatcctgttcaca
cgcatcttcattcctacttccttcctgctagtctgcatccttcacctgcactacttccat
gagcacttccttgcactcactgatctcaaagctgtggctgccaaacaggacaatgccatc
tacagactcgcacatccagatggcagcttggcagatcttacaatgatgagctcctctcct
gaatccttggtggacaaggagaaggagatgttggtggtggagagcatggcggatgaaaaa
aagaaggaggaggagaactccatccatgatgagagtcaacagtgcagtgctgctacagat
ccagaaattccatctgaagagagctcagatctaaaaaataagtggcatctggtggtagac
cgtctaacagtgctctttttgaagtttctggagtactttcataaactgcagctcttcatc
tggtggttgctggagatgcacgtcatcaagatagtgtcttcctacatcattctggtgtct
gttactgaggtgtctctactgaactatgtgttcctggcatcatgggcctttgctctgccc
taccatcagttcaggcatatggcctccagcatctgcactgtatggacttgtgtgatcatc
atctgcaaaatgttgtaccagctggagtctatagacccagatacatactcgagtaattgc
acaatgcttatgaattacacagaaaaggaaaggaattacatgaagagttctttgctgtac
gagaagccagtagaccctgctaactgggttggcttggagaagtttccctctcttttgcca
aatctaaggaataacttactgatgttggccatcttggcattcgaggtcaccatctaccgg
catcaggagtattaccggctgcgcaacaagctttctcctccaccgtttcgaataattttt
catgagattacgcgtcaacaccttgataacagcatcatcaactgtgccaaatacttcatc
aactacttcttttacaagttcggggtggaggtatgttttcttttggcggtgaacgtgatt
ggccagcgcatggacttctactctatgctgcatgccgttgctctggcagcagtaatgtac
cggcgcaggagaaaagccattgctgaaatctggcctaaatactgctgctttctggcctgc
atgatcacctttcagtattttgtctgtataggcatcccaccagcagcatgtaaagaatat
ccatggagattccccaactcttcaacagattccaatgtcattaagtggctgttcctgcct
gatttccacacaaagccaaaccccaagtttctcatctatgactttatgttgctcctaagc
gcttcactgcagggccaggtgtttgatgaggagaataaggcagcggttcgtctaatggct
ggtgagaacgtagagatctgccgagatctggatgccgcctctttcagtgtacataaccct
gtcccagactttatacactgcaggtcgtatttggacatgctgaaggtgatcatgttcagc
tacctgttctggtttgtcctaaccatcatcttcatcacgggcaccacacgcatcagtatt
ttctgcatgggctacctggtggcgtgtttctacttcctgctttttggcggagagcttctg
ctcaaacccattaaaaagatcttgcactattgggacttcctgatagcctataacgtcttc
gtcatcaccatgaaaaacgtcttctctattcttgcatgtggctacatcaacaagctgaag
ttgaactgctgctggctgatccagctgctcagtttggcctgcaccatcaaagaatatgag
gacctgccagtctctagttttgaatgtgacttgcctaaggatgaggcaggaatcatctgg
gacagcatctgttttagctttctattgctacagagacgcgtcttcatgagctactacttc
ctccacgttgtggccgatatacgtgctggacagatcctggcttcgagaggagcagagctg
tttcaagcctctatcgtaaaggcagtgagagctcgaattgaggaggagaataaatccatg
gagcagctcaggagacagatggaccgcattaagacccggcaggagaagtttaaaaagggc
aaggagaagatgctgagcctgacccaggagtctactgaaagccagacaatatttccacct
gaagctggtgaagaggatgaagacgacgatggagcagagaaagagaaagccaaggccaaa
aaaaagcagtggtggaggccttgggttgaccatgcttccatggtgaggagcggtgattat
tacctgtttgaaactgacagtgaagaagaggaagaggaagaagagaaaaaagatgatgac
ccacccaagaaatctgcattccagcgagcaattggaaagtttgcctcagccgtcctggct
ttgcccaagtctataataaaactgcccaaaactatccttcagtatcttatcagggcagcc
aagtttgtataccaagcatgggtcacagactccaaaacagctcttaaggagcgggggaag
gagcggcggcatttctggaaaagatacggaagagggcgtaaacaccggaaagacaacgat
gaaggtcaagtggcaattgagatgggagatgatgaacagcagagctcagaggaggacaag
aaggaaggaccagacaacattattaaaagggttttcaacatcatcaagtttacctgggtg
ctattcctgaccactctggagagcctgaccaggtggatcaacaacatttgtaaagaatac
atcgacatctccaccgtgctgcgcatcgaacgctgcatgctcactagagaggtcaaaaag
ggtaacgtgccatcacgtgagagcatccacgtgtactaccagaagcagatgcgcctgaat
gtttcacgcgagtccggattggatcagatcagtgaggaggactcgggctcgcagaaactc
cggcgcagacgcaggggttatacattagagagccaggattccgtggcatcccgagatagc
atctccagtgcatacaccgaggccaccatgctcttttctcgccagtccacgttggacgac
ctggacgatgtanctcatcatgtgcccaaaaccagcgagcgtgctcggcccaaactgcgc
aaaatgtacagcatggacatgtccaactcgtctgcagacagtggcagcagcaacatctcc
agcgaagccactcagtgcgtcactttattctcacgacaaggtaccaacgacaccatcgat
gaggtggaggacgagcaagatcagtctcaccaccgtgacaaaagacttgaacaagttgag
gaagcaaagacaggcccctggagctccattgagcctgaatcagaacaagagctagaaaaa
gtcccggagcttgaggaagaagtaaaacctgaagcggcaaaacagttccctaaagattat
gaggacaggctggaggatgatgatgaagctcaaagccctgggagggaggatggcgaatct
tcttctggaccagagaggactagcggccggctttttaccccagacacagacgtcccaaac
acgtcagacgcagatgttcctcccagctatagcaaagcagtcagcttcgaccgtctttct
gttgactcacaggagagtgatgaagaaaagcagctcatgctgatgacctcagatagcagg
tcagatttactgtcggatgatgcacttctgccttcgcagaccaccgagctgacggctagt
gaactgctgctcaacaaaatgttttatgacgaagagctggatggctcagagcgcttctac
aagtcccagccgttgggcctgcagctatgctatgctctctacaacctgttagttgctcac
tctgagatggtttgctacctggtcatcatcctcaaccacatgatttcagcttctatggcc
acgctggtgctgcccgttctcatttttctgtgggccatgctgtctgttccacggcccagc
aaacgcttctggatgactgccatcatctacacagaggttaccatcgtcatcaagtacttc
ttccagttcagctttttccccttcaaccagaacctggaagtggacaaaaagaagccctat
caccctcctaacattattggggtggagaaaaaagatggttatgtccattacgacctcgtc
caactgcttgctctctttttccatcgctcgattctaaagtgccatggtctgtgggacgag
gatgatcccaaagacaaagagacaaagaaagacaggtctcaacatcgggatgagtccgag
gacgaagacaaaatggtggtgctgattccagcagagacaaaaaagaagagctcgccccct
cgctcaatgagatttaacctgggaagttctacagacttggactctgtgcagcaggtgcaa
gtgcgccagcccgaactgcgcacgtaccagcggcgcaagagctccagcggcggctcgtac
atctcacgccactcatcccaacgttccaaaagaggcagcacgagcacaaggaacagcagc
tgcagaggaagcagcgaggtcggagtcgaacccaaaactcgcaaggagctcatcatggag
aaactcagagagcagctcattaaagccaaattctttcttctcaagaaaggaagagaaatc
taccttcctattcgtcagttcttctataacctcatccatcctgattacagtgcagtgaca
gacgtctatgtactaatgttcctggcagacacagttgacttcatcatcattgtctttggc
ttctgggctttcgggaaacaccagggaggagcggacatcacatcttcgctgtctgaagat
caggtcccaggtccgttcctggtgatggtgctgatccagttcggcacaatggtagtcgac
cgagctttgtacctgcgtaaaaccgtcatgggcaaagtgattttccaagttatcctggtg
ttcggtatccacttttggatgttttttatcctgcctggaataacggaaaggcgtttcagc
cagaacacagtggcccagctgtggtactttgtgaagtgcatttacttcggtctgtccgcc
tatcaaatccgctgtggttaccccacccgtgtgctgggcaactttctgaccaagagctac
aactatgtcaacctctttctctttcaagggtttcgtgtgatcccatttctgactgagctg
cgtgccgtgatggactgggtatggacagacacgacgctcagcttgtccagctggatctgc
gtagaggatatctatgcacacatcttcgttctgaagtgctggagagaatccgaaaagcgg
tatcctcagccccggggtcagaagaagaagaaggtggttaagtatgggatgggtggaatg
attgttatgctgctcatctgcatcgtctggttcccgctgcttttcatgtctctggtcaaa
tctgtagcaggcgtcgtcaacgcacccttggacgtctcggtcagtctcacactcggtgga
ttccagccaatcttcacaatgagtgcgcagcagaagaacctgataagcattactttaaaa
gactttgaggatttcaataaagtgcatagttcagattcgatggcgttgcagtttctcgag
gcgtacgtgtatcaggatatcaccatcgcccacctagagggaagttccaactcgctgtgg
accatcagcccacccagccgagaaaacctgatcaaaatgttggaacaggacaagcaattc
catttaaccattgcttggtctgttcaaaggaatctctctttaggagcgaaagcagagaca
gcaacaggcaagcatgtcatcactctggaggatgacaccagacaaaaccttgtaaaagtg
ttaaataaccaaacatcatctgtgctgatcacaaaaatttttccgagatatatccgtgca
cccagtgattccaacgctaaacccattgaacagctgagtaaagattcaggtttggaaaac
attactctggctctaggccgggggaacagcactgcagggaaagttcaggagtggtgggtt
gtgaaccagaccaagccaggcaaaatcctccaaaaagataaagaacatggaaaggctgga
ctagatctctacattttcagtgatcaggtcagccctcctagtctgggctttctagctgga
tatggtatcatgggtctgtacatgtccgtggtgctggtgatcggcaagtttgtgcgcgag
ttcttcagcggaatctcccacaccatcatgttcgaggagctacccaacgtggaccgcatc
cttaaactctgcactgacatcttccttgtccgagaaacaggagagctggacctggaggaa
gacctctactccaagctcatcttcctctaccgctctccagagaccatgatcaaatggacc
agggagaagaacaagtga
DBGET
integrated database retrieval system