Silurus meridionalis (southern catfish): 124403014
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Entry
124403014 CDS
T08004
Symbol
gigyf2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124403014 (gigyf2)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124403014 (gigyf2)
Surveillance factors
Other surveillance factors
124403014 (gigyf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
124403014
NCBI-ProteinID:
XP_046732494
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All DBs
Position
20:complement(9230175..9259752)
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AA seq
1323 aa
AA seq
DB search
MAETQTLNFGPEWLRALSGGGGSSIVASPPLSPALPKYKLADYRYGREEMLALYIKDNKI
PVDLHDKEFLPILQEEPLPPLALVSFTEEEQRNFSMSVNSAAVLRLTGRGGGVVAGAPRG
RSSSRGRGRGRGEGGFYQRSFDDVEGGFGRGGREMHRSQSWEERGDRRFEKPSRKDPDGA
PAHFQLNHLRANYEDGSTGLVRKHDFTRSESENWRLSRDEQNGEDEEGGGWRLAGSRRDN
ERWCPPSPDGPRLAGGWREQPDQRRRLPMDSRGEEERGVGYRRPRSASGSMEDERDALPE
WCLEDAEEETGTFDSSGAFLPLKKTPAEPILEEAELEFRPLEEGEDCCENDENEAEHPKE
PDSKCQTARHEDAVKSEEVSPPAAPLPPVPEPTVSVALPSSLSERVEEPEKPAAPEIRAA
AVHLHSALPISIPHSTNTLSTLTELPASSLPVLPTQQITSHPKSVEVPVVLPDALHFPKN
IISIGKLATLPTDADEDEGLKHFEQEAEKMVAYLHDGAVDDDRLGSKSAERPKVACLPPS
HEAALKWYYKDPQGEIQGPFSNHEMSEWFQAGYFTMTLLVKRGCDEGFHPLGEIFKMWGR
VPFAPGPPLPPLLGDADQERLKRQQELNALSIYQLQQLQYQYIIRQQQYAQALAQQKVLN
SAPPPTQQQQQLNLFLQQALKLRSQEQQQSLLPPVTRSMSVPDSGSIWDIQNPSTQASCT
ANIQPAAPSTWEGTSVWDLPIDTIPQPSIEQIQLEKAKAAKLEMELRVKREEEERKRLEE
VLRAQQEEERKRLEEEELARRNQEEALRRQLEQEESQRRQKEEEERLAREEELRRLEERR
REEEERNQREEFLRKQEEARRKQEELEAQRRREEEAAALARQQQEEQKRREQELQRQQEL
QRQQELQREKELLKQQELQRQQETQRQQEAQRQQELQRQRQQQQEALRRLQQQQQQQQLA
QMKLPSSSKWGQQSATTVSLSQTQNTLSLSEIQKLEEERERLAREEQRRKQQELQRQQQQ
QQQQPQSKLSGWGSVAKQPAATKSLLEIQQEEAQQMKQRKEQQQSTVIQQNRTQNKAALT
ASVWGSVSNTSHWGSDNSSIWGDTQNSNLGFWDDAVKETAPPPTTRKNNPQKNKGNVNLS
NSNSGKSSKKVEEEEKLLKLFQGANKTQDGFMQWCEQMLHTLNTANNLDVPTFASFLKEV
DSPYEVHDYVRAYLGDTAQAKDFAKQFLERRAKQNVNQQNSLPSQQLKNQQDSVWGLNQT
VSQPVFQSNHSTKQQQTRFETVTSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETV
EDF
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacccagacacttaactttggaccagaatggctccgagctttgtctggagga
ggtgggagcagcattgtggcttctccaccactctcacctgcattgccaaagtataaactt
gcagactatcgctacgggagagaagagatgcttgcactttatataaaggataacaagatt
cctgtagatctacatgacaaggaatttctgcctattttacaagaggagcccctaccccca
ctagccctagtgtcttttacagaggaagaacagaggaatttctctatgtcagtaaacagc
gcagcagtgttgcgcctgaccgggcgaggagggggtgtggtagcaggggcaccacgaggt
cgaagttcttcacgtgggcgaggtcgaggaagaggggaaggagggttttaccaaagaagt
tttgatgatgtagaaggcggctttggtcgcggagggagagagatgcatcggtctcaaagc
tgggaggaaaggggagacagaagatttgaaaagccaagtcgaaaggatccagatggagct
ccagcccactttcagctcaaccatttacgcgcaaattatgaggatggcagtacaggccta
gtgcgtaagcacgatttcacacgctccgagagtgagaattggaggctgtcgcgtgatgaa
cagaacggtgaggatgaggagggtggtggttggcgtctagcaggctcccgccgggacaac
gaacgatggtgtccaccgagtccagacgggccacgcttggctggaggatggcgggaacaa
ccagatcagcggcggcgactgccaatggattcccgtggggaggaggagcgtggtgtgggg
tacaggcgaccacgctcggccagtggcagcatggaggacgagagggatgcactgcctgaa
tggtgtctggaggatgctgaggaggagacaggcacttttgactcatctggagcttttctc
ccactcaagaaaactcctgcagagccaattcttgaggaggcagagctagagttccgtcca
ctagaggagggtgaagattgctgcgagaacgatgaaaatgaagcagagcatcctaaagaa
cctgacagcaagtgccaaactgccaggcatgaggatgcagtcaaatcagaagaggtttct
ccacctgctgctccattacctccagttccagagccaactgtgtctgtagctttgccttcc
agcctttcagagagggtggaggagcctgagaaaccagcagcacctgaaatcagagctgct
gctgttcatttacactcagctctgcccatctccataccacacagcacaaatacactcagc
acactaacagagcttccagcctcttccctcccagtgttgcccacccagcaaatcacttca
catcccaagtcagtggaggtgccagtggtattacctgatgcacttcatttcccaaagaac
atcatatcaattggaaaacttgcaaccttgcccacagatgcagatgaggatgagggcctc
aaacactttgagcaggaagccgaaaaaatggtggcatatttacatgatggtgccgtggat
gatgatcgtttggggtctaagagtgcagagcgacccaaagttgcctgcctgccaccatcc
catgaggctgctctcaagtggtactacaaggatcctcagggagagattcaaggtccattc
agtaatcatgagatgtctgagtggttccaggctgggtatttcacaatgacgctgctggtc
aaaaggggctgtgatgaaggttttcatcccctgggagaaatctttaagatgtgggggaga
gtgccttttgcccctggccctccactacctcctttactgggagatgctgatcaggagaga
ttgaaaagacagcaggagctaaatgctctaagcatctatcagcttcagcaactgcaatat
cagtacataatcaggcagcagcagtatgctcaggctctagctcaacaaaaagtgcttaat
tcagctccccctccaacacaacagcaacagcaacttaatctgtttctgcaacaagcgctc
aaactcagatcccaggaacagcagcagagtcttttaccgccagtgacgcgttccatgtcc
gttccagattcaggttcgatttgggatatacagaacccatctacccaagcatcctgtaca
gcaaacatacaaccagcagctccaagcacatgggaaggcacaagtgtgtgggatctgcca
atagacaccatacctcaaccatctattgaacagatacaactggagaaggctaaagctgct
aagctggagatggaactcagagtcaaaagagaagaagaggagagaaagcgtctggaggag
gtgctgcgggcacagcaggaagaagagcgcaaacgtctggaggaagaggagctggctcga
cgaaatcaggaggaggcactcaggaggcaactggagcaagaggagtcacaacggcgacag
aaagaggaagaagaacgtctggcacgggaggaggagctccgcaggctagaggagagaagg
agagaagaggaagaaagaaatcaaagggaagaattcctcagaaagcaggaagaggcacga
aggaaacaggaggaactggaggctcagaggaggcgagaggaggaagctgcagcattggct
cgacaacagcaagaagagcagaagaggagagagcaggagctccagaggcagcaggagctc
cagaggcagcaggagctccaaagggaaaaggagcttttaaagcagcaggaattacagagg
cagcaagagactcagaggcaacaagaagcgcagaggcagcaggagctacagagacagaga
cagcagcagcaggaggcccttcgtcgactccagcaacaacagcagcaacaacagctggcc
cagatgaagcttccctcttcatctaagtggggacagcagtctgccacaacagtttccctc
tcccaaacacagaacactttgtcactcagcgagatccagaaacttgaagaggagcgagaa
cgactagctagagaggagcagcgacgcaagcagcaggagctccagaggcagcaacagcaa
caacaacagcaacctcagtctaagctttcaggctggggcagtgtggccaagcaaccggca
gccactaaatcccttctggagattcaacaggaggaggctcagcagatgaagcagaggaaa
gagcagcagcaatctacagttatacagcaaaaccgcacacaaaacaaagctgctttgacc
gcttcagtgtggggttcagtgagtaacaccagtcactggggctcagacaacagcagcatc
tggggtgacactcagaactctaacctaggcttctgggatgacgctgtgaaggaaactgct
ccacctccaaccacacgaaaaaacaacccacagaaaaacaagggaaatgttaacctcagt
aacagtaacagtgggaaatccagtaagaaggtagaagaagaggagaaactgttaaagctg
tttcagggagccaataaaactcaggatggctttatgcagtggtgtgagcagatgctacac
acacttaacactgccaacaaccttgatgtcccgacatttgcatcattcttaaaggaggtg
gactctccttacgaggtgcatgattatgtaagggcatatctgggtgacactgcccaggcc
aaggactttgccaagcagttcctggagcgccgtgccaaacagaacgtcaaccagcaaaat
tctttgccgagtcagcaactgaaaaatcagcaggactctgtgtgggggttaaaccaaacc
gtgtctcagccggttttccaatccaaccactccacaaagcaacagcaaacacgctttgag
acagtcacctctgggaagaaaaagaagaagcagaaaatggtgcgggccgatcccagtcta
ttaggcttttcagtcaacgcgtcatctgagcgattaaacatgggcgagattgagactgtg
gaggacttttga
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