Silurus meridionalis (southern catfish): 124403043
Help
Entry
124403043 CDS
T08004
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124403043
Membrane trafficking [BR:
smeo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124403043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
Ank_2
PH
Motif
Other DBs
NCBI-GeneID:
124403043
NCBI-ProteinID:
XP_046732559
LinkDB
All DBs
Position
20:32329..64652
Genome browser
AA seq
1088 aa
AA seq
DB search
MELSRKEVPLYGQARVFMLIPSQTESKEMFVVLEGSSLIHVLQTKVHLLNYFITPGHNQQ
ETVCVRAYTHVRGVLHYVGVSFLKYVEDDAQEMAEYFVTHCDQLSTIEYSDLIGRYGLSD
SSMKEEMDKNVALALANLQTNHNLLNHTHESLLHVCVRLSFVRVCEFLLSQPGALMIINS
TNQEGDTPLQLAQRTKQYTLVHLLTHPPNPLITPLAGVSHIRIDSAHLLRFFHGSGVMSL
SVCVSECVSSAQLQSAILLLRECVKDSALIYKITSLCGHIQCRSDQESLSSSSEDLQSGE
SPQTIVTHTDLISSCSDPEDEELLLSISSGGSDIEVNTAAGVNKHSQKQDNTESESRTSN
PLTCTEYLEETALISESKLSVNKAAAVEENGEWTSTQTKDIQKIPLKTHTLSMLLCSSSH
SSPSLFSNNLKNINSHRRRINSEGCGHELTIRKSASVIVPAPLDYSAESWSAVVGFEFSS
TLDRKTVKRQEVIYEFMQTEFHHVQTLTVMTDVLRRGLLKEVQLEQDVIGQIFPCLDDLI
TLHRNFLKEMETRRHISSHLSNHKNFIVHRIGDILLQQFSGPSAGNMMSLYGDFCSKQSE
ALKIYKHLQQSNRKLQLFLKQQSSNSIIKRREIPEFLLLVTQRITKYPVLLERLLQLTDG
GGVEHDDVMAALEGVRCVLSGVELHVEKIQRARELDDVINHLDNKSFTRLKSGEIYSKHT
FTHTSHTLIHSATITCRTTSGRLKDVFALLLSDVLVFLQEKEQKFAFAALEQKPSVVPLR
ALILREIANQDRGLFLISSDAAEPEMYEIHTQTREERDRWITLLQHTMDSLPDNKLMTNE
ELKCRNINTLQEDLLSLDVQMYTVLEEKLRLCVGNFTCQQLLIQTHTHTPNGEELLTAAQ
EEVVSLMMCMMSLLFGYQDSSQHDKLELSKKRLKLREPFILKVGDCVQSLIQLLYSLQAA
VMMQDSVYEVQKLLILEKQSLHPEEKCVQVDDGSKCYSNVEQRDIGQSEEMDRMKREKDK
LKVMLQQWAEKAQALKEEEADIERERRWIQQEERRIRKERERMERKLHLSQLNSTNHQHS
LSIIPLDK
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggagctgagcaggaaagaagttccactttatggacaggcaagagtgtttatgttaatt
ccatcgcaaacagaatcaaaggaaatgtttgtggttttagaaggttcaagtttaattcat
gtactacagactaaagtacatttactgaactactttattactccaggccataaccagcag
gagacggtgtgtgtgagagcgtacacacatgttagaggtgtactgcattacgttggcgtc
tcgtttttgaagtatgttgaggacgatgcacaggagatggctgagtactttgtaacccat
tgcgaccagctcagcaccattgaatacagtgatctgattggtcgatacggtctgagtgac
agcagcatgaaagaagaaatggataaaaatgttgcactcgctctggcaaacctgcagacc
aaccataacctgctgaaccacacccatgaatctctgctgcatgtgtgtgtgcgtctgagt
ttcgtgcgagtatgtgagtttctgctctctcagcctggtgctctgatgatcatcaattca
accaatcaagaaggagacactccacttcagctggctcagaggaccaaacagtacacactt
gtgcacttgctcacacatcctccaaacccactcatcactcctctagctggagtgtctcac
atccgaattgactcagcgcatctcttgcggttttttcatggctctggagtgatgtcactg
tcagtgtgtgtgtcagaatgtgtgtcctctgctcaattacagtcagcgatcttactactc
agagagtgtgttaaggattctgccctcatatacaaaattacatcactttgtggacatata
cagtgcagatcagatcaggagtctttatcatcatcttcagaggatcttcagtcaggagaa
tctcctcagaccattgtcacacacacagatcttatcagcagctgcagtgaccctgaagat
gaagaacttttactgtccattagctcaggtggatcagacattgaggtaaacaccgcagct
ggggttaataaacactctcaaaagcaagacaacactgagtctgagagcagaacatctaac
ccactgacctgcacagagtatcttgaagaaacagctctcatcagtgagagtaagttgagt
gttaataaagcagcagccgtggaggagaatggtgaatggacatcaactcaaacgaaggac
atacaaaagatcccactgaagacacatactctctccatgctcctttgctcatcaagccac
agctctccatcactattcagcaacaaccttaaaaacatcaactcacacaggagaaggatt
aacagtgaggggtgtggtcatgagttgacaataaggaaatcagcatctgtgattgtccct
gcacctctggattattcggcggagtcatggagcgctgttgttgggtttgaattctcaagc
acacttgaccgaaaaactgtgaagagacaggaagtgatatatgagttcatgcagacggag
tttcatcacgttcagacccttacagtgatgactgatgttttgagaagaggtttattgaag
gaggtgcaactggaacaggatgtgattggtcagattttcccatgtttagatgatctcata
actctacacagaaacttcctgaaagagatggagaccagaagacacatctcatcacacctg
agcaaccacaagaacttcatcgtccacaggatcggagatatactgctacagcagttctca
ggtccatctgcaggtaacatgatgtctctgtatggggatttctgcagtaagcaatctgaa
gcactaaagatttataaacatcttcaacagagcaacaggaaactacaactattcctcaaa
cagcagagcagtaattcgattataaaacgcagagaaatccctgaatttctgctgctggtt
acacagagaataacaaaataccctgtcctactggagagactactgcagctcaccgatggg
ggaggagtcgagcatgatgatgtcatggcggcactggagggggtgcggtgtgtgttgtca
ggtgttgaactgcatgtggagaaaatccagcgtgcacgggaacttgatgatgtcatcaac
catcttgataacaagagcttcactcgcctgaagagtggcgagatctacagcaaacacact
tttacacacacatcacacacactcatacattctgctacgatcacttgcaggactacatca
ggcagactaaaagatgttttcgcacttcttctctctgatgttctggttttccttcaggag
aaagagcagaagtttgcatttgctgctttggaacaaaagccttctgttgttcctctgcgt
gctttgatcctgagagaaatagccaatcaggatcgaggattgtttctgatcagcagtgat
gcagcagagccagaaatgtatgagatccacacacagactcgtgaagagagagacagatgg
atcacactgctgcaacacaccatggacagtttgcctgataataaactgatgactaatgaa
gagctgaaatgcagaaacataaacacactgcaagaggatctgttatctctagatgtgcag
atgtacacagttttggaggagaaactcaggctgtgtgttgggaattttacttgccagcaa
ctgctcatacaaacccacacacacacaccgaatggagaggaattactgactgctgcacag
gaagaggtagtaagtctgatgatgtgtatgatgtcactgctctttggttatcaagattct
tctcagcatgataaactagaactgagcaaaaaacgtctaaaactaagggaaccttttata
ctaaaggtgggagactgtgtgcagagcttaattcagctattgtacagtctgcaggctgca
gttatgatgcaggacagtgtatatgaagttcagaaactgctgatcctggagaaacaatct
ctgcaccctgaagagaagtgtgttcaggttgatgatgggagtaaatgctattcaaatgtg
gagcagagagacatcggtcagtctgaagaaatggacaggatgaaaagagagaaggataaa
ctaaaggtgatgctacagcagtgggcggagaaagctcaggctctaaaagaggaggaggca
gatatcgagagagaaagaaggtggatccagcaagaggaaagacgaatacggaaggagagg
gagagaatggagaggaaacttcacctctcacagctaaattcaaccaatcaccaacacagt
ctgtctatcatcccactggacaaataa
DBGET
integrated database retrieval system
