Silurus meridionalis (southern catfish): 124403087
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Entry
124403087 CDS
T08004
Symbol
rpp40
Name
(RefSeq) ribonuclease P protein subunit p40
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124403087 (rpp40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smeo03009
]
124403087 (rpp40)
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124403087 (rpp40)
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124403087 (rpp40)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
124403087 (rpp40)
Ribosome biogenesis [BR:
smeo03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
124403087 (rpp40)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
124403087 (rpp40)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
124403087 (rpp40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
124403087
NCBI-ProteinID:
XP_046732630
LinkDB
All DBs
Position
20:complement(11869308..11878697)
Genome browser
AA seq
357 aa
AA seq
DB search
MPPHLEKCPRSLLVSEKSNFLNEASRHEAHVSKHWFNYKISLLIPECEVLPADFLKVIGN
FSSYYIVQDLPVYRFLEEDMLEIIKKGSFYALSYKTRLDEDNVIACLGRKLILSLDKDTY
EQLGLEGKPSLYNHRKPMRYVVTVDLTDKSLVPGAKRYQQVLLSLKERVLLRCDFLLTDS
HSDQDGYLKALLSQYTYEKCRPTLSTQNLTDLLCPSLQSSDFQGKSLSCTPEQFLDWLGA
VNLNISCQNSATSFLSTYVCPEPCNSVSQALLCTVTGLIPPEDISALLQELRKYFDEPKV
AAWVSLTVHGFVDSPVCWGTNEHGFLKGGENFYNFVCFKNQEYWLHMATGAHDGCPP
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgccaccacacttggagaaatgtccgaggagcctattagtatctgaaaagtccaacttc
ttgaatgaagcatcacgacatgaagcgcacgtgtctaaacactggttcaactataagatt
tctttgctgatacctgaatgtgaagtactgcctgctgatttcctaaaggttatcggtaat
ttcagctcatattatattgttcaggatctaccagtttacagatttctggaagaggacatg
cttgaaataattaagaaaggcagtttttatgcactctcctacaaaacccgacttgatgaa
gacaatgttattgcttgtttaggcagaaaattaatattgtctcttgataaggacacgtat
gagcagcttggcctggagggaaaaccatcactatacaatcacagaaagcccatgagatac
gttgtaactgtggacctcaccgataaatcgttggtgcctggtgcaaagcgataccagcaa
gttctgctaagtttgaaagaaagagttttactgagatgcgactttcttttaacagatagc
cattcagaccaagatggctatctgaaggctctcctgtctcagtacacctacgagaagtgt
aggcctactcttagtacccaaaatctgacagatctgttgtgcccatcacttcagtcctca
gattttcagggaaagagtctttcatgtaccccagagcaattcctagactggcttggggca
gtcaacctgaatatcagttgtcaaaactcagctacaagtttcctgtccacatacgtgtgt
ccggagccatgcaattctgtgagccaggccctgctttgcacagtaactggactcattcct
cctgaagacatttctgcacttttacaagaacttagaaaatattttgatgaaccaaaggtc
gcagcttgggtctcgctcactgtgcatggctttgtggatagccctgtgtgctggggaaca
aacgaacatggcttcctcaaggggggagagaacttctacaattttgtttgcttcaagaac
caggaatactggttgcacatggctactggtgcacatgatggctgtccaccttga
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