Silurus meridionalis (southern catfish): 124403091
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Entry
124403091 CDS
T08004
Symbol
rorcb
Name
(RefSeq) RAR-related orphan receptor C b
KO
K08533
RAR-related orphan receptor beta
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124403091 (rorcb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
smeo03310
]
124403091 (rorcb)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124403091 (rorcb)
Nuclear receptors [BR:
smeo03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
124403091 (rorcb)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
124403091
NCBI-ProteinID:
XP_046732634
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Position
20:complement(7435195..7462641)
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AA seq
476 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQRHQQLAREPEEAGVDGGHSRSY
SSTGSNTTLSDLDDITTLPDGLLFDLPLTPGEAAEYCALELLEGEASSGTGSAVSSSSSN
QSSPESSILDVMEAGRVKHEYQLLPEPSLLTHTLLGALSDDCSLLDIERITQNVVKSHLE
TCQYSTEELKRLTFNLYSPEETRSFQLKSAEWMWQQCAVHITNAIQYVVEFAKRISGFMD
LCQNDQIILLKAGCLEVLLIRMCRAYNSTNNTMFFDGKFASPQLFKALGCDDLVNAIFEL
AKSLCRLQLSEEEMALFSAAILLSPDRPWLTESQQVQKLQEKVYLALQQSLHMGGCGQEK
LDKMASKLPQMKSICNLHVDKLEFFRIVHPETAYSFPPLYREVFGSEINFPDSTDS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaggtgattccgtgtaagatctgtggcgataagtcctctgggatt
cattatggtgtcatcacctgtgaaggctgcaagggatttttccgccgcagccagcagaac
aatgctatgtactcttgctctcggcagaggaactgcctgatcgatcgcaccaaccgcaac
cgctgccagcactgtcgcctccagaagtgtttggcactcggcatgagccgggatgcggtg
aagtttggccgcatgtctaaaaagcagcgtgacagtctgtacgcggaggtacagcgacac
cagcagctggcacgtgagcctgaggaggcaggtgtggacggtggacacagccgctcctac
agtagcacaggctccaacactaccctcagcgatctagacgacattacaacactgcccgac
ggcttgctttttgacttgccactcacgccaggggaagcagcggaatactgtgctctcgag
ctgttagaaggcgaggctagtagtggtacaggaagtgcagtgagcagcagctcatccaat
cagagctctccagagtcgagtatactggatgtgatggaagcaggccgggtgaagcatgaa
taccagctgctgcctgagcccagtctgcttactcacactctgctgggggcgctatcagat
gactgctctctgcttgatatagagcggatcactcagaatgtggtgaagtcgcatttagag
acgtgtcagtacagcacagaggagctcaagcgactcacttttaacctgtattcacctgag
gagactcgctccttccagctcaagtctgctgagtggatgtggcagcagtgcgccgtgcac
atcaccaacgccatccagtatgtggtggagtttgccaagcgaatcagcggcttcatggac
ctctgccaaaacgatcagattatcctccttaaagcaggctgcttagaggttctgctgatc
cgcatgtgccgcgcgtacaactccaccaacaacacgatgtttttcgacggcaagtttgcc
agccctcagctctttaaagcgctaggctgtgacgacctagtaaatgccatcttcgagttg
gccaagagtctgtgtcgcctgcagctgagtgaggaagagatggccctgttcagtgccgcc
atcttgctatcacctgatcgtccatggttaacagagagtcagcaggtgcaaaagctgcag
gagaaggtttatttggccctgcagcagagcctgcacatgggaggatgcggtcaagagaaa
ctggacaagatggcatccaagctgccacagatgaagtcaatctgtaacctccacgtcgac
aagctggagttctttcggatagttcaccctgaaacggcctacagcttccctcctctttac
agggaagtgtttggtagtgagatcaatttcccggactccactgacagttaa
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