Silurus meridionalis (southern catfish): 124403107
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Entry
124403107 CDS
T08004
Name
(RefSeq) claudin-4-like
KO
K06087
claudin
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03272
Virion - Hepatitis viruses
smeo04382
Cornified envelope formation
smeo04514
Cell adhesion molecule (CAM) interaction
smeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
124403107
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
124403107
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124403107
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
124403107
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smeo03037
]
124403107
04147 Exosome [BR:
smeo04147
]
124403107
Cilium and associated proteins [BR:
smeo03037
]
Other cilia and associated proteins
Stereociliary proteins
124403107
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
124403107
Exosomal proteins of colorectal cancer cells
124403107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
CdpA_N
Voltage_CLC
Motif
Other DBs
NCBI-GeneID:
124403107
NCBI-ProteinID:
XP_046732652
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All DBs
Position
20:complement(13859784..13869478)
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AA seq
370 aa
AA seq
DB search
MAALGLEILGLVLATIGWIVGIASCALPMWRVTAFIGSNIVTAQIIWQGIWMDCVVQSTG
QMQCKVYDSMLALPEDLQAARALCVIAIVLGVLGIFVSVTGAKCTNCIEDEPTKTKVIIA
AGVTFICAGVMELIPVSWSAHTIIMDFYNPVITEAQKRELGTMSAGLELIGIVLCVLGWL
LAIVSCALPMWRVTAFIGSNIVTAQIYWDGLWMSCVVQSTGQMQCKVYDSTLALSQDLQA
ARALTVISILLVILAMLVSFAGAKCTNCIDDESSKAKIMIVAGVLFLVAGLMQLIPVSWS
ANTIIRDFYNPLLNNPQRWELGASLYIGWAATALLMLGGSLLCCSCPPSRTTYSASRSAA
TAGYDRRDYV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcttggtttagagatcttgggcctcgtattggccactataggctggattgtt
ggtattgcatcctgtgctttgccaatgtggagggtgaccgctttcatcggttcaaacatt
gtgacagcacagatcatctggcagggcatctggatggattgtgtggtgcagagcacaggc
cagatgcagtgtaaggtctacgactctatgctggcactgcccgaagatcttcaggcagct
cgagctctgtgtgtgattgccatcgtgctgggtgtattgggaatcttcgtctctgtcaca
ggggccaagtgcaccaactgcatagaagatgagcccacgaagaccaaggtaataatcgct
gctggtgtgacatttatctgtgccggtgtcatggagttgattcccgtgtcctggtcagcg
cacacgatcatcatggatttctacaacccagtgataacagaggcacagaaacgagaactt
ggaaccatgtctgctggcctggagctgattgggattgtactgtgtgtgctaggatggctc
ctggcaattgtctcctgcgctctgcccatgtggagggtcacggccttcatcgggagcaac
attgtgacggctcagatctactgggatggcctgtggatgagctgtgtggtgcaaagcact
gggcagatgcaatgcaaagtctacgactccacactggcgctatcccaagatctccaagca
gcccgtgcccttactgtcatctccatcctgctggtcattctagccatgctggtgtccttc
gctggagccaagtgcaccaactgcattgatgacgaatcatcgaaggccaaaatcatgatt
gtggctggagttctctttcttgttgccggcctcatgcagctgatccctgtctcctggtca
gctaataccatcatcagggatttctacaatcccttactgaacaacccgcagagatgggag
ctaggggcttcgctttacatcggctgggccgccacagctctcctgatgttgggtggatcg
ttgctgtgttgctcttgtcctccatcaaggacgacttattcagcttcccgatctgcagct
actgctgggtatgaccgaagagactatgtgtga
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integrated database retrieval system
