Silurus meridionalis (southern catfish): 124403128
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Entry
124403128 CDS
T08004
Symbol
gbp2
Name
(RefSeq) guanylate-binding protein 1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124403128 (gbp2)
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
DUF2207_C
BRO1
Motif
Other DBs
NCBI-GeneID:
124403128
NCBI-ProteinID:
XP_046732696
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Position
20:9422649..9433868
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AA seq
623 aa
AA seq
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MSKAMEGPVCLISSDSEGRLCIVKESKEILEGITQPVIVVSVVGLYRTGKSYLMNRLAGQ
QTGFALGSTIESKTKGIWMWCVPHPIKQGHTLVLLDTEGLGDVHKGDEKHDTWIFCLAVL
LSSTLVYNSLGVIDNNALEKLHYVTELTENIRVKATKSRDHDDSAEFMRVFPSFIWTVRD
FTLRLEKEGRAITADEYLEGALELKAGNSSKVEKFNLPRRCLRHFFAERRCFVFPRPAGD
SELSRMEELSDTDLDERFLLRAEEFCSYVFRNTKPKTLTGGRVLSGSALGSLAEVYVEAI
CSGQIPCLENAVNTLAEIQNKQAVEQGLQAYQSQLFELVCFPLDPSELSDIHRKAETAAI
DVFIRTSFNDTEQKAQLKLMEEIQVVYQDLCGQNREECLNACKLELKRVFTPLEEAIGDG
SFMRPGGYRQYRDQLQSLTNEYKARTHKQMMSEEVLSQFLNEKEKFGENILLADQCLTDA
EQNKEVERLRREILEQKNKSLQEMKELQEQALKDQQNTYEQHMNQLLERLEKERERAKED
NERVLNAKVKEQKALLEKEFAERADQMNKEIESLKEEMKSEDESNRSTLSKIVDGVGIAA
SLFLPGFIPKAAGFGISFLSRYI
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagccatggaagggccagtatgcctcattagcagcgattctgaaggacgccta
tgtattgtaaaggaatctaaagagatactggaggggatcactcaaccagttattgtagtg
tctgtggtgggactttaccgcacaggaaagtcttacctcatgaaccgcctagcaggacaa
caaaccggctttgctctgggcagcactatagagtcaaaaactaaaggcatctggatgtgg
tgtgttccacaccccattaaacaaggacatactcttgtgctactggacactgagggactc
ggggatgtgcacaagggtgatgaaaagcatgacacatggatcttctgcctggctgtcctg
ctcagtagcactctggtctacaacagtctgggagttattgacaacaatgcacttgaaaag
ctacactatgtgacagaactgactgagaacattagagtaaaagcaacgaaaagtagggac
catgatgactcagcagaatttatgcgagtttttccttccttcatctggactgtacgagac
ttcacactaaggctggagaaggaaggcagggccatcacagctgatgaatatctggaaggt
gctttggagcttaaagctggtaattcatcaaaagttgagaagttcaacctgcccaggcgg
tgtttgcgtcactttttcgcagaacggcgatgttttgtattcccacggccagctggagat
agtgaactgtcaaggatggaggagttgtccgacacagatcttgacgaacgatttctgctt
cgtgctgaggagttctgcagctatgtgtttagaaataccaaaccaaaaaccttaacagga
ggccgggtgctcagtggcagtgctctgggcagtctggctgaggtttatgtggaggcaatt
tgcagtggccagattccttgtctggaaaatgcagtgaatactttggctgagatccagaat
aaacaggcagtagaacagggcttgcaggcttaccagagtcagctgtttgagttagtgtgc
tttccacttgacccatctgagctatcagacatccacagaaaagcagagacagcagctatt
gatgtttttatcaggacttccttcaatgacactgagcaaaaagcacagctgaagcttatg
gaagagattcaggttgtgtatcaggatctgtgtggtcagaatcgtgaggaatgtttgaat
gcttgtaagctggagctgaaacgagtgtttactcctctggaggaggctataggtgacggc
tcctttatgcgccctggaggatacagacagtaccgtgatcaactacagagcttaacaaat
gaatacaaagcacgcacacacaaacagatgatgagtgaggaagtgttgagccagtttctg
aatgagaaggagaagtttggggagaatattcttttagctgatcagtgcctcacagatgca
gagcaaaacaaagaggtggagagattgcgaagggagattttggagcagaagaacaaatca
ttacaggaaatgaaggaacttcaggagcaggctttaaaggaccagcagaatacctatgaa
cagcacatgaaccagctgctggaacgcttggagaaagaaagggagagggcaaaggaagac
aacgaacgagtgctaaacgctaaagtaaaagaacaaaaggctctgttagaaaaagaattt
gcagagagagcggatcaaatgaataaagagattgaaagtctgaaagaagagatgaagagc
gaggacgagtcaaatcggtctacactcagtaagatagtagatggtgtaggcattgcagca
agtctgttccttcctggcttcatcccaaaagctgctggttttggcatatcttttctttca
cgatatatttaa
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