Silurus meridionalis (southern catfish): 124403130
Help
Entry
124403130 CDS
T08004
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124403130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
124403130
NCBI-ProteinID:
XP_046732698
LinkDB
All DBs
Position
20:complement(9414244..9422417)
Genome browser
AA seq
619 aa
AA seq
DB search
MCSPMQEPMCLVENVNGSLNVNEEASKYLSRNNQPVVVVSVVGLYRTGKSYLMNRLAGKS
RGFALGNTIESKTKGIWMWCVPHPYQQGHTLVLLDTEGLDDIDKGDSKNDAWIFCLAVLL
SSTLVYNSRGTIDNNAVEKLHYVTELSEQIKIKSSSAKEVEEEDEEFQFVQFFPNFIWAV
RDFLLVLETKKKGPMTEDEYLDFALQLKTGLGTKITNYNLPRQCIRYNFPTRKCFVFPFP
ASQDKIVHLKSLDENDICPDFLTATQRFCDYVFNVSKVKMVKGGYKVTGKMFGHLVHSYV
ETISSGNVPCLENVVLAMARIENEEAVQEGIKLYQSSMEQVKSLFPVSFSELSAENKKIS
NMVNTEFMKRSFKDKNGEYFKKLMMAVDKHYAELSVLNMEASEKKCQQILSDLYKEISER
IQNRDFLKPGGYKLYCTHRDNIILQYHSQPNKGIQADEVLAKFLSGKSEEAKLILQTDEQ
LTEFEKKIQEEKEQAAFLQQQCRVEQERKMEVERLLQEEKEHHEQMVLQLNIKLEEEKFQ
QQQEVERAIESKLIEQKKLLIDFEEKAHLMGLEIEQLKKEKEELSHSFYKDYFIQVLSIA
KELFLMYMQYKAMPKQISM
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagcccaatgcaagagcctatgtgtttggtggaaaatgtgaatggttcactgaat
gtaaatgaggaagccagtaaatacctgtccaggaacaaccagccagtggtggtggtgtct
gtggtgggcctctatcgcacaggaaagtcatacctcatgaaccgcctggcaggaaaatca
agaggctttgctctgggtaacaccattgagtcaaagactaaaggtatttggatgtggtgt
gttccacatccttatcaacaaggacatactctggtgctgctggacactgagggactagat
gacattgacaagggagactctaaaaacgatgcctggatcttctgtctggctgttcttctg
agcagcactttagtctacaacagccgaggaaccattgacaacaatgcagtggaaaaatta
cactatgtcaccgagctttcagagcagattaagatcaaatcttcttcagccaaagaagtc
gaggaggaagacgaagaatttcagtttgtgcagttttttcctaactttatctgggcagtg
cgtgactttttactggtgctggaaactaaaaaaaaaggtccaatgactgaggatgagtac
ctggattttgcactgcagttgaagacaggtcttggtacaaagatcaccaactacaatctt
ccaaggcagtgtattagatacaattttccaacccggaagtgttttgttttcccgtttcct
gcatcccaagacaaaattgttcatctcaagagcctggatgagaacgacatttgtcctgac
tttctgactgccacacagcgtttttgtgactatgtttttaatgtaagcaaagttaaaatg
gttaaaggaggatacaaagtcacagggaaaatgtttggtcaccttgtgcactcatatgtg
gagacaatctctagtgggaatgtcccttgtctggaaaatgttgtgctagccatggcaagg
atagaaaatgaggaagctgtccaggaaggcattaagctgtaccagagtagtatggaacag
gtgaaaagtttgtttcctgtgagttttagtgaactttctgcagagaacaaaaagatcagt
aacatggtcaacactgagttcatgaagcgctccttcaaagacaaaaatggcgaatacttc
aagaaactgatgatggcagtagacaaacattatgctgaactaagtgttctgaacatggag
gcatcagaaaagaaatgccagcagattctgtctgatctatacaaggagataagtgaacgt
atacaaaatagagactttttaaaacctgggggatataagctctactgtacacacagagac
aatatcatcctacagtatcacagtcagccaaacaaaggaatccaggctgatgaagtgcta
gcgaagtttctgagtgggaaaagtgaggaggcgaaattaattctccagactgatgaacaa
ctgactgaatttgagaaaaagattcaagaggagaaagaacaagcagcttttttacagcaa
cagtgcagagtagaacaggagagaaagatggaggtggaacgactgttgcaggaggaaaaa
gagcaccatgagcaaatggtactgcagctgaatataaaacttgaggaggaaaagtttcag
cagcagcaggaagtggagagagccattgaaagcaaactaattgaacagaaaaaacttttg
atagattttgaagagaaagcccatctaatgggtctggagattgaacaacttaaaaaagaa
aaggaggaactttctcacagtttttataaagattatttcattcaggttctgtcgatagct
aaagaattgtttttgatgtacatgcagtataaagcaatgccaaaacagatatcaatgtaa
DBGET
integrated database retrieval system