Silurus meridionalis (southern catfish): 124403132
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Entry
124403132 CDS
T08004
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124403132 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124403132 (rpap2)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
124403132 (rpap2)
Protein phosphatases and associated proteins [BR:
smeo01009
]
HAD phosphatases
Fcp/Scp phosphatases
124403132 (rpap2)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124403132 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
124403132
NCBI-ProteinID:
XP_046732700
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Position
20:complement(1555409..1567527)
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AA seq
583 aa
AA seq
DB search
MDAGGRRRARVSRAKTDGKAAQVRRSAEEEARRKEILKESLRERLELERRALQVVERLLD
DSVTEDFLVDCARLITPANYRDAVEERSIAKMCGYPVCSNKLVNVPRQRFKISTKTNKVY
EITERKCFCCNFCYKASKYLEVQISKSPLWLRKEERPSEVKLLKKGDGGTSGLEVKLSDR
HVTTSDIENPIPESTGSHRGIGDGEESGDGGDDEEEEEQGFVSSVVSRPQQQHRRHVHWG
DLPRQGGDKQQTCEGDPQTSGARSERETRSDGAQVSQAISDSLSVEETSNVLDQVALSDS
DGTSLNISRVGMSKQTAAGLRNLLKSSGRTRAEAPVVTLSLMECLTRTLMEWRTEETARF
LCGPGSTSYAEAEPQSDGDEEELDEDDLEDVEKVKCSGDAASAAAPDYETLRRETQMLEL
QVHEFYRGECVLPEKVQTHTEDRENVPPLPLVDSRAQRAIQRSIVVKKLCRSLEDIIGPL
GVTMSEIINDINSVLRTFRFTNVNIIHKPPEWTLIAVVLLTVLAEVSPSLRESMTRTCSV
DYISSLMKELGLKDEDLQSLVKLLRPPRNACATVSATECRVDS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggacgccggtggaagaagacgagctcgcgtgtccagagctaaaacagatggaaaagca
gctcaggtgaggaggtctgctgaagaggaggccagaaggaaggagattttgaaggagagt
ctgagggagaggcttgagttggagaggagagctcttcaggtggtggagaggctcctggac
gacagcgtgactgaggatttcctggtcgactgtgcaagactgatcacgccagcaaactac
agagatgcagtagaggaacgttccatcgccaaaatgtgtgggtacccagtctgctccaac
aaacttgttaacgttccgaggcaacggtttaaaatttccaccaagaccaacaaggtgtat
gaaatcacagagcgcaagtgcttctgttgcaatttctgctacaaagcttcgaaatatctg
gaggtccagatttccaaatcaccgctgtggctgaggaaggaggagagaccttctgaggtg
aagttgttgaagaaaggagatggaggtacttcaggtctggaggtgaagctatcagacaga
catgtgaccacatcagacatcgagaatccgatcccagaaagcaccggttctcacagaggc
atcggtgatggtgaggagagtggtgatggtggtgatgatgaggaagaggaggagcagggc
ttcgtgtccagtgtggtgtccagaccacagcagcaacacaggagacatgttcactggggt
gatctgcccagacagggcggagacaaacaacaaacatgtgaaggtgaccctcaaacatca
ggagcgaggagcgagagagaaacgcgcagcgatggtgctcaggtctctcaagcaatcagt
gactccttatcagtggaggaaaccagcaatgttctagatcaggtcgctctttcagactcg
gatggaacgagcctcaacatctcccgagtggggatgagtaaacaaaccgccgccggactc
cggaatctgctgaagagctccgggagaacgagagccgaagctccagtggtcacgctcagc
ctaatggaatgtctcacacgcacgctgatggagtggagaaccgaggagaccgcgaggttc
ctgtgtggaccaggttccacctcctacgctgaggccgagccgcagagcgacggcgatgag
gaggaactggatgaagacgacctggaggacgtagagaaggtgaagtgttcaggagatgca
gcttctgccgcagcacccgattacgagactctgaggagagagacgcagatgctggagctt
caagtgcacgagttttacagaggagagtgtgtcctgcctgagaaggtgcaaacgcacact
gaggaccgcgagaacgtcccgccgttgccgctggtcgactctcgcgctcagcgagcgatc
cagagaagcatcgttgtgaagaagctgtgcagaagtctcgaagacatcatcgggcctctg
ggtgtcaccatgagcgagatcatcaacgatattaactccgtcctccggaccttcagattt
acaaacgttaacatcatccacaagcctcctgaatggactttgattgccgtcgttctgctt
acagttttggctgaggtgtctccgtctctgagggaatcgatgacaaggacttgttcagtc
gactacatcagctctctcatgaaggagctcgggctgaaagacgaggacctgcagagtctc
gtgaagctcctcagacctcccaggaacgcgtgtgctacagtctcggctacagagtgcaga
gtcgactcatga
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