Silurus meridionalis (southern catfish): 124403149
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Entry
124403149 CDS
T08004
Symbol
dscamb
Name
(RefSeq) Down syndrome cell adhesion molecule
KO
K06767
Down syndrome cell adhesion molecule
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smeo04515
]
124403149 (dscamb)
Cell adhesion molecules [BR:
smeo04515
]
Immunoglobulin superfamily
DSCAM family
124403149 (dscamb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
Sp38
Interfer-bind
fn3_2
DUF6377
DUF4446
DUF6249
Motif
Other DBs
NCBI-GeneID:
124403149
NCBI-ProteinID:
XP_046732722
LinkDB
All DBs
Position
20:13548676..13689040
Genome browser
AA seq
2020 aa
AA seq
DB search
MWIFAFLFLQSISNVFGEDLHSSLYFVNASLQEVVFSSTTGALVPCPAAAVPPATLRWYL
ATGEEIYDVPGIRHVHPNGTLQIYGFLPSSFSNLINDNTYYCTAENPSGKIRSQDLHIKA
VFREPYTVRVADQRVMRGNTVVFKCIIPASVEDYVTVVSWEKDTVSLVSGSRFLVTSTGA
LYILDVQSEDAVNIYRCTTRHRYTGETRQSNSARLLLSEPVDSAPVILDGFERKEVMVGH
RVELPCKASGHPPPRYRWLKDNSPLESDSRYHQSVSGLLIEATRPSDGGNYVCEVWNSFG
NAKVVGRLVVKQPLKAVVSPRKVRGSVGSQVSLFCSVTGSDEYEITWYRNGERIQPGPNV
RITGLSHENLVMEGMAKSDGGAYQCFARNGKMSTQDFVQVILEDGTPKILSAFSEKVVSP
NEPISLVCHVKGTPLPSVTWTLDDEPVIKDSHHRMDRFITVEGHVLSYLNVSHTQVTDGG
VYRCTCNNSAGSVSYQARINVRGPASIRPMKNLTAIAGRDMFIHCRIIGYPYYSIKWYKD
SNLLPFNHRQRAFENNGTLKLSNVQNSDEGEYTCYVLVDPEKQIHRSVHVTVKVPPLIQH
SDSQSASIGQRVFIPCVVTSGDLPMSITWHKDGKPINASLGVTIDNIDFTSSLRISNLSE
IHNGSYTCIARNEAAAVEHSIQLIVKVPPHFEVQPRDQDGIYGKSVILNCSAKGNPIPTI
VWKHSKGAGVPQFQPIALNSGSRVQLLERGSLLIKHVLEEDSGYYLCKVSNDVGADISKS
MYLTVKIPAMITSYPNTTRAEQGHMTEMSCTAHGEKPIKVRWEKESHIINPDINRYVVSV
KEVADEVISTLQILHTVREDSGFYSCIAINSYGEDKGIIQLIVQDRPDPPEVEIREVKDR
TIALRWTMGFDGNSPITGYDINYKNKSASWALSQTTKDVSPQLNQATIIELHPASTYNIR
MFAKNQIGESRPSNELTITTDEAPPDGAPLDVQLEAISSQSIKVSWKAPHKHLQNGLIRS
YQVCYREYGTGGSPQYNTINLDTTGDMESITLDNLKKYTQYEVRVQAANRAGMGPTSEEA
IITTLEDVPSRPPENVVTTATTPETISLSWAPLPKEALNGMLLGYRVIYWANLLDGELGE
IKNITTTKASLELEGLEKYTNYSIQVLAFTRAGDGVRSEQIYTRTKEDVPGPPAGVKAAA
ASASVVFVSWLPPMKLNGIIRKYTVFCSNPYPTVISEFEAAPDVYFRRVTNLNQNWQYSI
WVVAVTAAGRGNASEIISVEPQAKAPARILTFSGTVTTPWMRDIVLPCRAVGDPPPTIKW
LKGNNGTPAPVSIDGRRSVHSNGSFVIRTVKAEDSGYYSCIVSNNWGSDDITLNLQVQVP
PDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEEWGSFPISPSERSYRLE
NMKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQFAKDHELFSSINSTRVELNLIGW
NNGGCPISSFTLEFRPVDTAPWTTMQRTSLPKSHVLYDLQEGTWYELQMRVGNSAGTAEK
RVLFATLNMDGSTIAPLLKIVDPSQENRQGTEGLKMMVTIISILVAIAMVFIVLLVMRRR
RREQRLKRLRDAKSLAEMLMSKNTRTPDAVNKQQQTLRMHIDIPRAQLLIEERDTMETID
DRSTVLLTDNDFGETSKQKSSTVTHTVHYQSLSQTTGPLVDVSDARPGTNPTARRTAKAG
PATRSRYASQWTLNRPHQPMSSHTLTTDWRLPTPRATGSVDKESDSYSVSPSQDTDRARS
SMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGTNDYTDSMT
SSTPSESGICRFTASPPKPQDASRVMNMAVPKAHRPAGELVHLPPYLRMDFLLNRGAAHS
GREATGQTCLEPQRSRTAKRPAVLAPTPSETPSTAPASSGPPSREAVQQWQPGSASTLPH
REPGDLAQAAKLSSSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atgtggatatttgcatttctctttctccagagcatctcaaatgtttttggtgaagatcta
cattccagcttatattttgtcaatgcatctctgcaagaggtagtgttctccagcactaca
ggggcactggtgccgtgtccggcagcggccgtgccccccgctacgctgcgctggtacctg
gccactggggaggagatctacgatgtgccaggcatccgacacgtgcacccgaatggcacg
ctgcaaatctatggcttcctcccctccagctttagtaacctaatcaatgacaacacttac
tattgcacagccgagaatccgtcagggaagatcaggagccaagacttgcacatcaaggct
gtatttcgggaaccgtacacggtccgtgtggcggaccaaagagtcatgagaggcaataca
gtggtcttcaagtgcattatcccagcctcggtagaggactatgtcactgttgtatcatgg
gagaaagacaccgtctcacttgtctcaggatcaagatttcttgttacatccacaggggcc
ttgtatattctggacgtgcagtcagaggatgcggtgaacatctaccgctgcaccacgcgg
catcgctacacaggagagaccagacaaagtaacagtgcccgattacttttatcagagccc
gtggattcagcaccagtgatactagatggatttgagagaaaggaggtcatggttggtcat
cgggtggagctgccctgtaaggcgtctggtcatcctccgcctcgctaccgttggctaaag
gacaacagcccattagagtcggacagtcgctatcaccagagtgtctcaggcctcctgatt
gaggccaccagacccagtgatggaggcaactatgtgtgtgaagtctggaacagctttggc
aatgccaaggtggtgggacggttggtggtcaaacagcccctgaaagcagtggtgagtcct
cgtaaggtgagaggcagcgtgggcagtcaggtgtctctgttctgtagtgtcactggctct
gacgaatatgaaatcacctggtatagaaatggagaaaggatccagccagggcccaatgtc
cgtatcactggcctcagccatgagaacctggtgatggagggcatggccaagagtgatgga
ggagcctaccaatgttttgcccgcaatggcaagatgtccacccaggattttgtgcaagtc
attctggaggatggcactccaaagatactatcagccttcagcgagaaggtggtgagcccc
aacgagccaatttccctggtgtgtcacgtcaaaggcaccccactccccagcgtgacctgg
acactggatgatgagccggtcatcaaggacagccaccaccgcatggatcgcttcatcacg
gttgagggccacgttctcagctacctgaatgtttcacatacgcaggtcaccgacggcggc
gtttaccgttgcacttgcaacaactctgccggatcggtctcctaccaggcgcgaataaac
gtaagaggtcctgccagtatccgcccaatgaaaaatctcactgccatcgcggggcgggac
atgttcattcactgccgcatcataggctacccttactattccatcaagtggtacaaagat
tccaacttactcccctttaaccatcgccagcgtgccttcgagaacaacggcacattgaag
ctgtctaatgtgcaaaactcagatgagggcgagtacacgtgctacgttctggtcgatcct
gagaaacagatccatcgcagcgtccatgttacagtaaaagttccacctttgatccagcac
tcagactcccaaagcgcctccataggtcagagagtcttcatcccatgtgtggtgacctcc
ggtgacctgcccatgtccattacttggcacaaagacggcaagcccatcaatgccagctta
ggtgtcactatcgacaacattgatttcaccagctcgctgcgcatttccaacctatctgag
atccacaatgggagttatacctgtatagcccggaatgaagcggctgctgtggagcacagc
attcagcttattgttaaagtccctccacattttgaggtgcaacctcgagaccaggatgga
atctacgggaaatctgttattctgaactgctcggctaaaggaaacccgattcctacaatt
gtgtggaaacattctaaaggcgccggagttccacagttccagcccattgctctgaactcg
ggatctcgtgtgcagttgctagagagaggctcactgctcattaaacacgtgctggaggag
gacagtggctactacctgtgcaaggtcagcaacgacgtgggtgctgacatcagcaagagc
atgtacctcaccgtcaaaattcctgccatgattacgtcctatcccaacaccactcgagca
gaacaaggtcacatgactgagatgagctgcacagcgcatggtgagaagcccatcaaggtg
cgctgggagaaagaatcccacatcatcaaccctgacatcaaccgctacgtggtgagcgtc
aaggaagtggccgatgaggtcatttctacattacagattttgcacacagtcagagaggat
tctgggttttattcctgcattgctattaactcttacggtgaagacaagggaattattcag
cttatagttcaagatcgtccagaccctcctgaagtagaaatcagagaggtgaaagatcga
accattgcgctccgctggacaatgggatttgacggcaacagtccaatcaccggatatgac
atcaactacaagaacaaatcagcatcctgggcattgtcccaaactaccaaagacgtctca
cctcagctgaaccaggccaccatcattgagttgcaccctgcctcgacttataacatccgc
atgtttgctaagaatcagattggagagagtcggcccagtaatgagctcaccattactaca
gatgaagcccctcctgatggcgcgcccctggatgtgcagctggaagcgatatcatcccag
agcattaaagtctcatggaaggctcctcacaagcaccttcaaaacggtttgatccggagc
tatcaggtgtgctatagagagtatggcacaggaggaagcccccagtacaacaccatcaat
ctagacacaacgggcgacatggagtctatcactctggacaacctgaagaagtacacacag
tatgaagtgcgtgtgcaggctgccaatcgggcaggaatggggcccacatctgaggaagcc
atcatcaccacactggaagacgttccaagccgaccgcctgagaacgtcgtgactacggcc
acaaccccagaaaccatctctttgtcctgggctcctctcccaaaagaagctctaaatggc
atgcttcttggctaccgggtcatctactgggccaatttattagacggagaactgggtgag
atcaagaacattactaccacaaaagcctccttggaactcgaagggttggagaaatatacc
aactacagcatccaagtactggcttttacccgagctggggatggagttcgcagcgaacaa
atatacacaaggaccaaagaggatgttccaggtccaccagctggtgtgaaggctgctgcg
gcttctgcctctgttgtctttgtctcctggcttcctccaatgaagctcaacggaatcatc
cggaagtataccgtcttctgctccaacccttatccgacggtcatcagcgagttcgaggcc
gcgcccgatgtgtatttccgccgtgtgaccaacctgaaccagaattggcagtacagtatt
tgggtggtggcagtgactgcggctggtcgagggaatgcgagtgagatcatcagtgtggag
ccgcaagctaaagctcctgctcgtatcctaacattcagtggcactgttaccacaccatgg
atgagggacatagtcctcccctgcagagctgtaggagaccctcctccaaccatcaaatgg
ctaaagggaaacaacgggacccctgctccggtctcgatcgatggtcggcgcagtgtccat
agcaacggcagctttgtgatccgcacagtgaaagccgaggattctggctactatagctgt
attgtcagcaacaactggggttcggatgatatcacactaaatctacaggttcaagtacct
ccggaccagccacgtctcactgtaactaaaaccaccaccacgtccatcactctgtcctgg
atccctggagacaatggaggaagctcaatcagaggttacattctgcagtactcagaggat
aacagtgaggaatggggaagcttccccatcagccccagcgaacgatcataccggctggag
aatatgaagtgtggcacctggtacaagttcaccctgactgctcagaacgccgtgggccca
ggacgcatcagtgaaatcatcgaagccaaaacccatggcaaagaaccacagtttgccaaa
gaccatgaacttttctccagcatcaattcaacacgtgtggagctcaatctgataggctgg
aacaacggtggctgtccgatcagctcattcacgctggagttccgaccagtagatactgcc
ccatggaccacaatgcagcgcacctctttacccaagagccacgtgctgtatgacctgcag
gaaggaacttggtacgagctgcaaatgagggtgggcaacagcgcgggtacagctgagaag
agagtgctttttgctacactgaatatggacggcagcactattgctccactgctgaagatc
gtagaccccagccaggagaaccgacaaggcactgagggcttgaaaatgatggtgacgatc
atcagcatcctggtggccattgcgatggttttcatcgtgctgcttgttatgaggaggaga
aggcgggaacagaggctcaaaagattacgggatgcaaaaagcttggcagaaatgctgatg
agtaagaacacacggaccccggatgctgtaaataaacaacagcaaaccctccgaatgcac
attgatatcccacgagcccaattgctcattgaggagagagacacaatggaaacaatagat
gaccgatctacagtgctgttgacagataatgattttggcgagacgtctaagcaaaagtcc
tccacagtcacacacacggttcactaccagtcgctgtcccagacaactggcccactggtt
gacgtctcagacgctcggcctggtacgaatcccactgcccgtcgtacggctaaagcgggt
cctgcgacgcggagccgctatgccagccaatggacgttaaacagacctcatcagcccatg
tcctcacacacactcactacggattggaggttgcccaccccgcgggccacaggctccgtg
gacaaggaaagtgacagctacagtgtcagtccctctcaggacacagatcgtgctcggagc
agcatggtgtccacagagagtgcttcctccacatatgaagaactcgcccgagcgtatgag
cacgccaaaatggaagaacagttgcgccatgctaagttcaccatcacagagtgcttcatc
tctgacacatcatctgagcagatgacagccggcaccaacgactacacagacagtatgaca
tccagcacgccgtccgagtcaggcatctgccgtttcaccgcctcgccacctaaaccacag
gatgccagccgggtcatgaacatggccgtgcccaaagcacacagacctgcaggtgaactg
gtccacttgcctccttacctgcgaatggacttcctgctgaaccggggagcagctcattca
ggccgggaagccacgggtcagacatgtctggagccacagagaagtcgtacagcaaagagg
ccggccgtgttagccccgacaccctctgagacgccttccactgcacctgcctcctctggc
ccacccagcagggaagcagtgcagcagtggcagccaggctcggcctccacgctgccacac
cgcgagccgggggacctcgcccaggctgccaaactcagcagctcgcaggaatcactgtta
gactctagaggacacctgaaacagagcaacaacccatacgcaaagtcctatacactggta
taa
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