Silurus meridionalis (southern catfish): 124403197
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Entry
124403197 CDS
T08004
Symbol
rinl
Name
(RefSeq) ras and Rab interactor 2 isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124403197 (rinl)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
124403197 (rinl)
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Gene cluster
GFIT
Motif
Pfam:
VPS9
RIN1
SH2
Motif
Other DBs
NCBI-GeneID:
124403197
NCBI-ProteinID:
XP_046732796
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Position
20:complement(13309408..13328712)
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AA seq
737 aa
AA seq
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MKRLDDEPTQSGNRTSLSGKLTNGDSVTQRNPVALLQGLRLCQEAWNPGSPWDRQGAHAA
LWGRQPGSFLVVSDSSSQNNLLCVSIDDQSKKVQDFPIIHTGSAQRLNTSHLAFSDLLQL
VVFYTLSRDVLPLCLSVPSWVCGLTEQSELLAFPPGPKVWLCPTAEPLPETMSPGTPDTP
DTVMCTIQLTAANGALCFINPLYLQEHGDDWLTHTSVSTTFTSRSFNPKRDRRLSMARAW
PGAGLKKRAESLEDSSASYESSAGSPVENPVSPVIPSGVVLRRASSTSTTDPLKRVSADS
ISPIPQSPHRVSWVEDKPWNPPAPSSLLHPPCLELDSLSMSSIEEETDVEPSASPSLVQN
SPRLPLADKVKNRLSAVSQALGGLMNPQRRLSKRVQEMSERKGSAFAEALRGFVEQTLKT
KATCVVTSTEILQEVRSSLTALREMLYDSSEIQSITDSFGDVPDFELDTIMEQVLHKVAL
KPVSTHLYESIKTARQQNGSLQQLQANQNTLKDKSLEELEGTAGAGVPDAAMLEKIQQRW
ATMHQQYSPQKKVDLLLKVCKNIYHSMTVNAKPGVVFGADDFLPCLTWVLLRSNVVTLQI
DTDYMMELLDPSQLQGEGGYYLTSLYASLFYISSFRSRLATRQLSVEAQKSLSQWHRRRT
LHCNQSRRSRNRRTIRRHRSGEKVNEDSEEVTASTSEEKKGQWTLDANDVTKRLQSLTES
SGDEKEEKQNGRSVDLQ
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagattggacgatgagcccacacagagtgggaacaggacgagcctttctggcaag
ctcaccaatggtgactctgtgactcagagaaaccctgtggctttattgcaggggttacgt
ctgtgtcaagaggcatggaacccaggaagcccatgggacagacagggagctcatgctgct
ctttggggcaggcaaccagggagtttcctggtagtgtctgactcctcttctcagaataat
cttctgtgtgtgtctatcgatgaccaaagcaagaaagttcaagactttcccatcatacac
actggctcagcacagcgcctaaatacatctcacttggccttctctgacctgctgcagctg
gtggtcttttacactttaagcagagatgtgttgcctttgtgcttgtcagttccttcatgg
gtgtgtggcttaacagaacagtcagaacttcttgctttcccacctggtccaaaggtctgg
ctttgtcccactgcagaaccgctaccagaaacaatgagtccaggaacaccagacactcca
gacactgtaatgtgcaccattcagttaacagcagccaatggtgcactctgctttattaac
ccactgtatctccaagagcatggagacgattggctgacacatacctcagtcagcacaact
ttcactagtcgctccttcaatcctaagcgtgataggaggctgagcatggcaagagcttgg
ccaggggcagggttgaagaagcgggccgagtcactggaagactcatctgccagttatgaa
agctcagcaggttctcctgttgagaacccggtttccccagtgattccatctggagtggtt
ttgcgcagagcaagcagcactagtaccacagatcctctaaagagggtgagtgcggattcg
atcagccccatccctcagtcacctcatcgggtgtcttgggtcgaggacaaaccatggaac
ccacctgctccttcctccctgctgcaccctccatgcctagaattagattctctgtcaatg
agcagcatagaagaggagactgatgtcgagccatctgcaagcccttcccttgtacaaaac
tcaccacgcctcccactggctgacaaggtaaagaacaggctttcagcagtcagccaggct
ctgggtggcttgatgaacccacagagacgactgagcaagcgagtgcaggaaatgagcgaa
cgcaagggcagtgccttcgcagaggctctaaggggatttgtggagcagaccctgaaaacg
aaagctacttgtgtggtgacaagtacagagatccttcaagaagtacgctcctctcttaca
gctctaagggaaatgttgtatgactcttctgaaatccagagcatcacagattcttttgga
gatgtgcctgattttgagctggataccattatggagcaagtcttacataaagtggcacta
aagccagtgtctacccatttgtatgagagcataaagacggcacgacagcagaatggcagc
ctgcagcagctgcaagcaaaccagaatacactgaaggacaaaagcctagaggagctggaa
gggacagcaggtgcaggtgttcctgatgcagccatgctggagaaaatccagcagcgctgg
gctaccatgcaccaacaatactcaccccaaaagaaggtggacttgctgctcaaagtgtgc
aaaaatatttaccacagcatgactgtcaatgccaagcctggtgtagttttcggagcagat
gacttcttgccctgtttgacatgggtattactccgcagcaatgttgtcactctgcagata
gacacagactacatgatggagctgctggatccctctcaattacagggagaaggtggatac
tacctgacatccctctacgcctccttgttctacattagcagtttccggtctcgtttggca
acacgccagctgagcgtcgaagcccagaagtccctcagccaatggcatcgcagacgcacg
ctccactgcaaccagtcacggcgaagcaggaaccgcaggacaatcaggaggcacagaagt
ggtgaaaaagtcaatgaggactcagaagaggtcactgcaagtacatccgaagagaaaaaa
ggacaatggactttggatgcgaatgatgtgacaaaaagacttcagagtttaactgagagt
tctggagatgaaaaggaagagaagcagaatggaagatcagtggacttacagtaa
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