Silurus meridionalis (southern catfish): 124403312
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Entry
124403312 CDS
T08004
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124403312
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
124403312
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
I-set
Ig_3
ig
Ig_2
LRR_14
LRR_EndoS
LRR_LRWD1
LRR_9
LRRNT
V-set
LRR_RPS2
LRR_NXF1-5
C2-set_2
Motif
Other DBs
NCBI-GeneID:
124403312
NCBI-ProteinID:
XP_046732946
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Position
20:complement(4993192..5036419)
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AA seq
604 aa
AA seq
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MAALWGLGWLGVSLTLLALAPASQSCPPRCDCVAQLRSVSCQRKRLSGVPEGIPTETRLL
DLSRNRLRWVSPGDLAPYPRLEEVDLSENLISTLEPNAFASLQALRTLHLRGNQLKLVPM
GAFARLSNLTTLDLSENKIVILLDYTFQDLHSLKHLEVGDNDLVYISHKAFSGLLGLEDL
TIERCNLTSISGQTLSYLRNLVTLRLRHLSISTIEDQNFRKMSALRGLEIDNWPYLEYIS
PLSFQGLNLTWLSITSTNITAVPSASFRNLVYLTSLNLSYNPISVLEPWAFKDLLRLKEL
HMVSTNLQVVEPHALGGLRQIRVLNLSSNELVTLAENSFHSVNSLETLRVDGNPLSCDCR
LLWILQRRRTLNFDGKMPVCAAPPEVRGNILSSFPDSALFDYFTCQKPKIRNRKLQQVTV
REGQLVSFLCHADGEPAPNIIWISPQRRKITSKSSSRITVLPSGTLEIRYAQVTDSGTYI
CIASNAGGNDTYFATLTVKGQPVDPALFTNRSLYAVDFNDTGLNSTRVFLKFTLDLTTIL
VSTAMGCITFLGVVLFCFLLLFVWSRGRGQRKNNFTVEYSFRKTEGPTTSSTSGGTRKFN
MKMI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggctgccctatggggcctgggctggctgggtgtgagcctcaccctgttggccctcgcc
ccagcgagccagagctgcccgccacgctgtgattgtgtggctcagcttcgctccgtgtcc
tgccagcgaaagcgtctgtcgggtgtacctgagggcatccccacagagaccaggctgcta
gaccttagtcggaaccgtctacgctgggtttcaccaggagacctggcaccctatccaagg
ctggaagaagtggacctcagcgagaacctcatctccacgctagagcccaatgcctttgcc
agtctacaggcactgagaacactgcatctgcgtggaaaccagctgaagctggtacctatg
ggcgccttcgctcgtctgtcgaatctcactaccttggacctgagcgaaaacaagatcgtc
atcctgttggattatacttttcaggacctgcacagtctcaaacaccttgaggttggtgac
aacgacttggtatacatctcacataaagctttctcgggattgctgggactggaagattta
accatagaaagatgcaacctgacatcaatctctggccaaaccttatcctacctgcgaaac
ctggtcacccttcgattacgccacctcagcatctccaccattgaagaccaaaactttcgt
aagatgtccgctttgcgagggctagagatagacaactggccgtacttggaatacatctcc
ccccttagtttccagggtctaaacttgacctggctgtccattactagcactaatataacc
gctgtcccttctgcttcttttcgcaaccttgtttacctgacatccctaaacctctcctat
aatcccatatctgtgctggaaccctgggcattcaaggatcttttaaggctgaaagagcta
cacatggtcagcactaacctgcaagttgtggagcctcatgctctgggcggtctgaggcag
atccgggtgcttaacctctccagcaatgaactggtcacactggcggagaactcctttcat
tccgtcaacagcctcgaaactctacgtgtcgatggaaatccactttcatgtgactgccgc
cttctgtggattctgcaacgcaggcgcactctaaactttgatgggaaaatgccagtatgt
gctgctccacctgaggtacggggtaatattttgagcagctttccagattctgcattattc
gactactttacttgccagaaaccgaagattcgcaaccggaagcttcagcaagtgacagtg
cgtgagggtcagttggtgtcattcctgtgtcatgctgatggtgaaccggcacctaatatc
atttggatctcaccacagcggcgaaagatcacatcaaaaagcagcagcaggatcacagtc
ttaccgagtggaacgctggagatacgatatgcccaggtgactgacagtggcacatatatc
tgcatcgccagcaatgcaggtggcaacgacacctactttgccacactgacggtgaaagga
caaccggtggaccccgctcttttcaccaatcgttctttgtacgccgtggactttaatgac
actggcctgaacagtacacgcgtcttccttaagttcacacttgacctaaccacaatcctg
gtgtctacagccatgggctgcatcaccttcctgggtgtagtgctcttctgtttcctgctg
ttgttcgtgtggagccgcggaagaggtcagcgcaagaacaacttcacagtagagtactca
ttcaggaagacagaggggcccacgaccagttcgacctctggagggacccgcaagttcaac
atgaaaatgatatga
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