Silurus meridionalis (southern catfish): 124403612
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Entry
124403612 CDS
T08004
Symbol
nup58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124403612 (nup58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124403612 (nup58)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124403612 (nup58)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
NUP58_M
Tox-ODYAM1
XAC0095_dom
FapA
Nup49_C
PSY3
MSC_0620_UU052
NET2A_C
PBC
Motif
Other DBs
NCBI-GeneID:
124403612
NCBI-ProteinID:
XP_046733240
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All DBs
Position
21:1071667..1088212
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AA seq
589 aa
AA seq
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MAGFSFGTGTLGSTNTGAGFSFGSASSAPATGTGGFSFGGLGTVTSANTSTTGSSLGLSS
GMFAQKPATGFSFNTPSSGAAAPAIGPSLGAPATAGAAPAASSGFAFGFGKPAASASPFS
LSTTSTSTAPATSGLSLGSVITSSAPQGGSTGFSLNLGAGGAMSSAPSTGLNLGSSLFST
SGSTGLGQQTLGGGLTLGGLLSSATSAAAPTPSLGLGGVDFSSSSEKKNDKSSGARPEDS
KALKDENLPPPICQDVDNFQKFVKEQKQVQEEISRMSSKAMLKVQDDIKSLKQLLSVSAS
GLQRNALSIDKLKMETAQELKNADIALRTQKTPPGLQHENTAPSDYFRGLVEQFEVQLQQ
YRQQIEELENHLTTQSSGSHITPQDLSLAMQKLYQTFVALAAQLQAVHENVKTLKHQYLG
YRRAFLDDATDVFESKRSASRKLQSAPRVTTGPTPFGSVPNATAVAMAATLTQQQQPAPG
SQAGFGTPFASSMGTSMGSSSLGAFGSGPAFGASATGGSSFAFSANKPSGGSLSAGFGSS
NTSGFNFSNPGINASAGLTFGVNTAQSAGFGTGVLQLKKPPAGNKRGKR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggccgggtttagtttcggaaccggtaccctgggatccacgaacaccggcgcgggtttt
tcttttggatcagcatccagcgctcctgcaacaggaaccggtggcttcagctttggtggt
cttggtacggtgacctccgccaacaccagcaccaccgggtcgtctctggggctcagcagc
ggaatgttcgctcagaaaccggcgaccgggttctcttttaacacgccttcctcgggagct
gctgcaccagccatcggaccctctttaggagctcccgccaccgctggcgccgcccctgcc
gcctcatcaggcttcgcgttcggtttcggaaaaccggcggcttctgcgagtccgttctcc
ctgagcaccacctccaccagcacggccccggcaaccagcggcctgtccctgggctccgtc
atcacctcctcagcacctcagggcggatcgacggggttctcgctcaacctgggggcagga
ggggccatgtcctcggctccgtccaccggtctcaatctcggctcttcgctcttctccacc
tcgggctccacgggtctcgggcagcagactctgggtggaggtctgacgttaggaggtttg
ctctcatccgccacgtcggccgcggctcccacgcccagcttgggtttgggcggagtcgac
ttcagctcatcgtcagagaagaaaaacgataaatcatctggcgctcggcccgaagatagt
aaagctctgaaggatgaaaacctgccacctccgatctgccaggatgtggacaacttccag
aagtttgtgaaggagcagaagcaggtgcaggaggagatcagccgcatgtcctctaaagcc
atgctgaaggtgcaggatgacatcaagagcctgaagcagctgctgtcggtcagcgccagc
gggctgcagaggaacgccctctctatagacaagctgaagatggagacggcgcaggagctg
aagaacgctgacattgccctgagaacccagaaaactcctcctggacttcagcacgagaac
acggctccctccgattacttccggggtctggtggaacagttcgaggtgcagttacaacag
taccgccagcagatagaggaactggagaaccatctgaccacccagagcagtggttcccac
atcactcctcaagatctgtctcttgccatgcagaagctctaccagacgttcgtagctctg
gctgcacagctgcaagccgtccacgagaacgtaaagacgttaaagcaccaatacctgggc
tacaggcgagcgttcctggatgatgcgacggacgtgttcgagtcgaagcgaagcgccagc
cgtaaactccagagcgccccgagagtcaccaccggccctacgcctttcggctccgtcccc
aacgccaccgccgttgccatggctgccacgctcacgcagcagcagcagcctgctccagga
tctcaggcgggttttggcactccctttgcctcaagcatgggcactagtatgggctccagc
agccttggagctttcggtagcggcccggcattcggcgcctcggcgactggaggctcatcg
ttcgctttttccgctaacaagccgtccggagggagcttgagtgcagggtttggaagttcc
aacacctcaggctttaacttcagtaacccaggaatcaacgcgtcggccggactgaccttt
ggcgtgaacacggctcagagcgccggctttggcaccggagtcctgcagctgaaaaaacct
ccagcgggcaataagaggggcaaaagatag
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