KEGG   Silurus meridionalis (southern catfish): 124403649
Entry
124403649         CDS       T08004                                 
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
  KO
K12876  RNA-binding protein 8A
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03013  Nucleocytoplasmic transport
smeo03015  mRNA surveillance pathway
smeo03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124403649 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    124403649 (rbm8a)
   03015 mRNA surveillance pathway
    124403649 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smeo03019]
    124403649 (rbm8a)
   03041 Spliceosome [BR:smeo03041]
    124403649 (rbm8a)
Messenger RNA biogenesis [BR:smeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     124403649 (rbm8a)
Spliceosome [BR:smeo03041]
 Complex C
  Other components
   EJC/TREX
    124403649 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 124403649
NCBI-ProteinID: XP_046733303
LinkDB
Position
21:complement(17531535..17534588)
AA seq 174 aa
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSDEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQELMGQPISVDWGFVRGPPKSKRRGGRRRSRSPDRRRR
NT seq 525 nt   +upstreamnt  +downstreamnt
atggcggacgtgttggatcttcacgaagcgggtggcgaggactttcctatggacgaagat
ggtgacgaaagcattcacaaactaaaagagaaagccaagaagaggaaaggacgtggattt
ggatctgatgaaggtgcgaggtccagagttagagaagattatgatacggtggagcaggat
ggcgacgagcccggaccacagagatctgtcgagggctggatcctgtttgtgaccggcgtt
cacgaggaggccacggaagaagacatccacgacaaattcgcagagtttggtgagatcaag
aatctgcatctcaatttggaccggaggactggttacttaaagggttacgcgctggtagaa
tacgagacgtataaagaagcccaggctgcgatggagggactgaacggccaggagctcatg
ggtcagcccatcagcgtggactggggctttgttcgagggcctccaaagagcaagaggagg
ggaggaagaaggcggagcagaagtccagacaggagacggcgctga

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