Silurus meridionalis (southern catfish): 124403783
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Entry
124403783 CDS
T08004
Symbol
cul1b
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-1b
KO
K03347
cullin 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04110
Cell cycle
smeo04114
Oocyte meiosis
smeo04120
Ubiquitin mediated proteolysis
smeo04141
Protein processing in endoplasmic reticulum
smeo04310
Wnt signaling pathway
smeo04340
Hedgehog signaling pathway
smeo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124403783 (cul1b)
04120 Ubiquitin mediated proteolysis
124403783 (cul1b)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124403783 (cul1b)
04340 Hedgehog signaling pathway
124403783 (cul1b)
04350 TGF-beta signaling pathway
124403783 (cul1b)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124403783 (cul1b)
04114 Oocyte meiosis
124403783 (cul1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124403783 (cul1b)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
124403783 (cul1b)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
124403783
NCBI-ProteinID:
XP_046733513
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Position
21:complement(7192028..7212468)
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AA seq
777 aa
AA seq
DB search
MSSNRNQNPHGLKQIGLDQIWDDLRAGIQQVYTRQSMARSRYMELYTHVYNYCTSVHQSN
QARGAGIPPTKPSKKSPTPGGAQFVGLELYKRLKEFLKSYLTNLLKDGEDLMDESVLKFY
TQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQV
TNAVLKLIERERNGETINTRLVSGVVQSYVELGLNEDDAFAKGPTLSVYKEYFESQFLAD
TERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH
LEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLETHIYNQGLAAIEKCGDSA
LNDPKIYVQTILDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAITKMAQSSSKSP
ELLARYCDSLLKKSSKNPEEEELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS
ASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLDFCIQV
LSSGSWPFQQSCTFALPSELERSYQRFTXFYASRHSGRKLTWLYHLSKGELVTNCFKNRY
TLQASTFQMAILLQFNMENSYTVQQLADSTQIKVDILVQVLQILLKSKLLVLEDENANVD
EMDFKPETLIKLFSGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIM
KMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccaacaggaaccagaacccacacgggctcaaacagattgggctggaccagatc
tgggatgacctgcgggcagggattcagcaggtgtacacgcgacagagcatggccaggtca
cgctacatggagctctacacacatgtttacaattactgtaccagtgtccatcagtcaaac
caggcgaggggtgcaggcattccccctaccaaaccctccaagaagtctcctactccaggg
ggagcacagtttgttgggcttgaactatacaaaagactgaaggagtttctcaagagctat
ttaacaaatcttctaaaggatggagaggatctgatggacgagagcgttctgaagttttac
acgcaacagtgggaggactaccgcttctccagtaaagtgttaaatgggatttgcgcctac
ctcaacagacactgggtacgccgggagtgtgacgaagggcggaaaggaatctatgaaatc
tattcgcttgccttggtgacgtggagagagtgtttattccgaccactaaataaacaggtg
acaaacgctgtattgaaactcattgagagagaaagaaatggagagactattaacaccagg
ctggtcagtggagttgtacagtcctatgttgaactgggcctgaatgaggacgatgccttt
gctaaaggacccacattatctgtatacaaagagtactttgagagccagttcttggcggat
acagaacgcttctacacaagggaaagcacagagtttctccaacaaaaccctgtaactgaa
tacatgaaaaaggctgaagccaggctattagaggagcagcggcgggttcaggtttacctt
catgagagcacacaagatgagctggctcgcaagtgtgaacaggttctcattgagaaacac
ctggagatattccatacagagtttcagaacctgcttgatgctgacaagaatgaagatctg
ggccgaatgtacaacctcgtctcgcgcatcacagacggtttaggggagctgaagaaactc
ttagagacgcacatttacaaccaaggcctggcagccattgagaagtgcggggactctgcc
ctcaatgatcctaaaatctacgtacagacaatattggacgtccacaagaaatataatgca
ttggtgatgtcagcgttcaataacgacgcaggctttgtggctgctcttgataaggcctgt
gggaggttcatcaacaataatgctattacaaagatggctcagtcgtccagcaaatctcca
gaactgctcgccagatattgtgactccttactgaaaaagagctcgaagaaccctgaggaa
gaagagctggaggacacactcaaccaagtgatggtggttttcaaatacattgaagataag
gacgttttccagaaattctatgccaaaatgctggctaagaggctggttcaccagaacagt
gccagcgatgatgccgaggccagtatgatctccaaattaaagcaagcatgtggttttgag
tacacctccaagctacagcgcatgttccaggacatcggtgtcagcaaggacttgaacgag
caatttaaaaagcaccttacaaactctgagcccttggacttggatttctgcattcaggtc
ctcagctcaggctcctggcctttccagcagtcatgcacattcgcattgccttcagagctg
gagcgcagttaccaaagattcacangcttttatgccagcagacacagtgggcgcaaactg
acctggctctaccatttatccaagggcgagctagtcaccaactgcttcaagaacagatac
actctacaggcgtccaccttccagatggccattctgctgcagttcaacatggagaacagc
tacacagttcagcagctggctgacagcacgcagattaaagtagatattttggttcaggtt
ttgcaaatcctgttgaagtctaagttgttggttttggaggacgagaatgcaaacgtcgat
gaaatggacttcaaacctgagacactcataaagcttttctcaggctataaaaataagaag
ttgcgggtcaacatcaacgtgccaatgaagaccgagcagaaacaagagcaggagacgaca
cacaaaaacatcgaagaggacagaaagctccttatacaggctgctatcgtcagaatcatg
aagatgaggaaagtcctaaagcaccagcaactccttgccgaagtactaaaccagttgtca
tcacgttttaaacctcgagtccctgtcatcaagaaatgcatcgatattttgatagagaag
gaatacctggagcgcgtcgacggcgagaaggacacctatagctacctagcttaa
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