KEGG   Silurus meridionalis (southern catfish): 124403783
Entry
124403783         CDS       T08004                                 
Symbol
cul1b
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-1b
  KO
K03347  cullin 1
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04110  Cell cycle
smeo04114  Oocyte meiosis
smeo04120  Ubiquitin mediated proteolysis
smeo04141  Protein processing in endoplasmic reticulum
smeo04310  Wnt signaling pathway
smeo04340  Hedgehog signaling pathway
smeo04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    124403783 (cul1b)
   04120 Ubiquitin mediated proteolysis
    124403783 (cul1b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    124403783 (cul1b)
   04340 Hedgehog signaling pathway
    124403783 (cul1b)
   04350 TGF-beta signaling pathway
    124403783 (cul1b)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    124403783 (cul1b)
   04114 Oocyte meiosis
    124403783 (cul1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smeo04121]
    124403783 (cul1b)
Ubiquitin system [BR:smeo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     124403783 (cul1b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 124403783
NCBI-ProteinID: XP_046733513
LinkDB
Position
21:complement(7192028..7212468)
AA seq 777 aa
MSSNRNQNPHGLKQIGLDQIWDDLRAGIQQVYTRQSMARSRYMELYTHVYNYCTSVHQSN
QARGAGIPPTKPSKKSPTPGGAQFVGLELYKRLKEFLKSYLTNLLKDGEDLMDESVLKFY
TQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQV
TNAVLKLIERERNGETINTRLVSGVVQSYVELGLNEDDAFAKGPTLSVYKEYFESQFLAD
TERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH
LEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLETHIYNQGLAAIEKCGDSA
LNDPKIYVQTILDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAITKMAQSSSKSP
ELLARYCDSLLKKSSKNPEEEELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS
ASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLDFCIQV
LSSGSWPFQQSCTFALPSELERSYQRFTXFYASRHSGRKLTWLYHLSKGELVTNCFKNRY
TLQASTFQMAILLQFNMENSYTVQQLADSTQIKVDILVQVLQILLKSKLLVLEDENANVD
EMDFKPETLIKLFSGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIM
KMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgtcgtccaacaggaaccagaacccacacgggctcaaacagattgggctggaccagatc
tgggatgacctgcgggcagggattcagcaggtgtacacgcgacagagcatggccaggtca
cgctacatggagctctacacacatgtttacaattactgtaccagtgtccatcagtcaaac
caggcgaggggtgcaggcattccccctaccaaaccctccaagaagtctcctactccaggg
ggagcacagtttgttgggcttgaactatacaaaagactgaaggagtttctcaagagctat
ttaacaaatcttctaaaggatggagaggatctgatggacgagagcgttctgaagttttac
acgcaacagtgggaggactaccgcttctccagtaaagtgttaaatgggatttgcgcctac
ctcaacagacactgggtacgccgggagtgtgacgaagggcggaaaggaatctatgaaatc
tattcgcttgccttggtgacgtggagagagtgtttattccgaccactaaataaacaggtg
acaaacgctgtattgaaactcattgagagagaaagaaatggagagactattaacaccagg
ctggtcagtggagttgtacagtcctatgttgaactgggcctgaatgaggacgatgccttt
gctaaaggacccacattatctgtatacaaagagtactttgagagccagttcttggcggat
acagaacgcttctacacaagggaaagcacagagtttctccaacaaaaccctgtaactgaa
tacatgaaaaaggctgaagccaggctattagaggagcagcggcgggttcaggtttacctt
catgagagcacacaagatgagctggctcgcaagtgtgaacaggttctcattgagaaacac
ctggagatattccatacagagtttcagaacctgcttgatgctgacaagaatgaagatctg
ggccgaatgtacaacctcgtctcgcgcatcacagacggtttaggggagctgaagaaactc
ttagagacgcacatttacaaccaaggcctggcagccattgagaagtgcggggactctgcc
ctcaatgatcctaaaatctacgtacagacaatattggacgtccacaagaaatataatgca
ttggtgatgtcagcgttcaataacgacgcaggctttgtggctgctcttgataaggcctgt
gggaggttcatcaacaataatgctattacaaagatggctcagtcgtccagcaaatctcca
gaactgctcgccagatattgtgactccttactgaaaaagagctcgaagaaccctgaggaa
gaagagctggaggacacactcaaccaagtgatggtggttttcaaatacattgaagataag
gacgttttccagaaattctatgccaaaatgctggctaagaggctggttcaccagaacagt
gccagcgatgatgccgaggccagtatgatctccaaattaaagcaagcatgtggttttgag
tacacctccaagctacagcgcatgttccaggacatcggtgtcagcaaggacttgaacgag
caatttaaaaagcaccttacaaactctgagcccttggacttggatttctgcattcaggtc
ctcagctcaggctcctggcctttccagcagtcatgcacattcgcattgccttcagagctg
gagcgcagttaccaaagattcacangcttttatgccagcagacacagtgggcgcaaactg
acctggctctaccatttatccaagggcgagctagtcaccaactgcttcaagaacagatac
actctacaggcgtccaccttccagatggccattctgctgcagttcaacatggagaacagc
tacacagttcagcagctggctgacagcacgcagattaaagtagatattttggttcaggtt
ttgcaaatcctgttgaagtctaagttgttggttttggaggacgagaatgcaaacgtcgat
gaaatggacttcaaacctgagacactcataaagcttttctcaggctataaaaataagaag
ttgcgggtcaacatcaacgtgccaatgaagaccgagcagaaacaagagcaggagacgaca
cacaaaaacatcgaagaggacagaaagctccttatacaggctgctatcgtcagaatcatg
aagatgaggaaagtcctaaagcaccagcaactccttgccgaagtactaaaccagttgtca
tcacgttttaaacctcgagtccctgtcatcaagaaatgcatcgatattttgatagagaag
gaatacctggagcgcgtcgacggcgagaaggacacctatagctacctagcttaa

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