Silurus meridionalis (southern catfish): 124403821
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Entry
124403821 CDS
T08004
Symbol
atl2
Name
(RefSeq) LOW QUALITY PROTEIN: atlastin-2
KO
K17339
atlastin [EC:3.6.5.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124403821 (atl2)
Membrane trafficking [BR:
smeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
124403821 (atl2)
Autophagy
ER-phagy
ER-phagy recepters
124403821 (atl2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
124403821
NCBI-ProteinID:
XP_046733562
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Position
2:18806033..18817513
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AA seq
600 aa
AA seq
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MAERRGPRNREYMRTNHISDCFVEDMTGXRDVPMCRPSHDSSKVHELNPDTNGVDPCAVE
DDLKPEEEELVAEGARPIQIVVANEEDHKFELDAAALEKILMQDHIKDLNVVVLSVAGAF
RKGKSFLLDFMLRYMHNQSSESWMGGDDEPLTGFSWRGGCERETTGIQAWSEVFVVEKTD
GSKVAVLLVDTQGAFDSQSTIKDCATVFALSTMTSSIQVYNLSQNIQEDDLQHLQLFTEY
GRLAMEEIYERPFQKLLFLIRDWCYPYEHYYGLDGGNRFLERRLQVKQNQHEELQNVRKH
IHSCFSSIDCFLLPHPGLKVATNPYFDGRLKDIDGDFKKELQNLVPLMLAPENLIEKEIN
GAKVTCRDLLEYFKAYIKIYQGDELPHPKSMLQATAEANNLTAVAGAKDTYSRTMQQVCG
GDKPYIAPVDLQRYHDELKQTSVKQFCAVKKMGGVEFSKRYQEQLESELDEVYANFIKHN
ESKNIFYAARTPATLFAVMFVAYIVSTVTGFLGISMIAVLANLVMGVSLMSLCAWAYVRY
SGEYREVGVAIDLTAEALWEQVLKPLTEQYMEENIRQTVVNSIRASLTEQVTQTSKLKTN
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgccgtggaccgagaaatcgggagtatatgcggacaaatcacataagtgac
tgctttgtcgaagatatgaccgggntcagggacgtgccaatgtgtcgtccttctcatgat
tcgagcaaagtgcatgagctaaaccctgacacaaacggagttgatccatgtgctgtggag
gacgatctcaaacccgaggaggaagagctagtcgcagaaggagctcggccaatacagata
gttgttgcaaatgaggaggaccataaatttgaattggatgctgcagcattggagaagatc
ctaatgcaagatcatatcaaggaccttaatgtggttgtgctctctgtggctggtgctttt
cgcaagggcaaatccttcctgctagacttcatgctgcgctacatgcacaatcagtcatct
gagtcatggatgggaggagatgatgagccactaacaggtttctcctggagagggggttgt
gagagagagacaacaggaatacaggcctggagtgaagtgtttgtggtggaaaagactgat
ggcagtaaggttgctgtcctgctggttgacactcagggagcttttgacagtcagtccact
attaaagactgtgctacggtttttgcactcagcactatgaccagctccatacaggtttat
aatctttcacagaatattcaagaggatgacctacagcatctacagctttttacagaatat
ggtcgcttggcaatggaggagatttatgaaagaccatttcagaaactcctgtttctgatc
agagattggtgttacccatatgagcattattatggacttgatggaggaaatcggttcttg
gaacggcgactgcaggtaaagcaaaaccagcatgaagagctacagaacgtaaggaagcat
atccactcatgtttctcaagcattgactgtttcttgctgcctcacccaggcctgaaggtt
gccactaacccctattttgatggcagacttaaagatattgatggtgattttaaaaaagag
ctgcaaaacctggtgcctttaatgctggcccctgagaacctcatcgagaaggagatcaat
ggtgccaaggtgacatgcagagacctactggagtatttcaaggcatacatcaaaatctac
caaggtgatgagctccctcatccaaagtccatgttgcaggcaactgctgaagctaacaac
ttgacagctgtggctggggctaaggacacttacagccggaccatgcagcaggtatgtggt
ggagataaaccatacattgcaccagttgacctccagcgctatcatgatgagctgaagcaa
acctctgtcaagcagttttgtgctgttaagaaaatgggaggtgttgagtttagcaaacgg
taccaggaacagctggagtctgagcttgatgaagtttatgcaaatttcatcaagcacaat
gaaagcaagaacattttctatgcagcaagaacgcctgcaacattgtttgctgtcatgttc
gtcgcctacatagtctccacagtaacagggttcctcggcatatcgatgatcgcggtcctg
gccaaccttgtgatgggggtgtccttgatgtcactgtgtgcatgggcgtatgtgagatat
tcaggcgaatatcgagaagtgggtgtggccatagaccttacagcagaagccttgtgggag
caggtgctgaagccactgactgagcagtacatggaggaaaatatccgccagactgtagtt
aactctataagagccagtctgactgaacaagtgactcaaacttccaagttaaaaactaac
tga
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