Silurus meridionalis (southern catfish): 124403832
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Entry
124403832 CDS
T08004
Symbol
tex10
Name
(RefSeq) testis-expressed protein 10 homolog
KO
K14827
pre-rRNA-processing protein IPI1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124403832 (tex10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smeo03009
]
124403832 (tex10)
Ribosome biogenesis [BR:
smeo03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
124403832 (tex10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
MMS19_N
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
124403832
NCBI-ProteinID:
XP_046733572
LinkDB
All DBs
Position
21:complement(12498044..12543259)
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AA seq
941 aa
AA seq
DB search
MKMSKKKKRQDDFHKVKLKVGKKKPKAENSTNVNFKSRSISLPDQLKRDDGGPTTHRQLS
IKDLLSQLHHYSSTVKQGALVGLRELLSAHPSLLEQHASVVLSEVAALFTDKDGAVRAAG
SRLLRLVAQCMPAERVAPFFPLLGAHLSCAMTHVSTSIQEDALRVLDVLLEHYPALLAQR
HTVLLSNFLELISQRRISGGMSKGGASGNRAEKGSYALSISTSQSVTAQQWRLTVLLRLG
RFLQAVVEERPTEDGVVCGSGFGMWSGEKGMVTPVEVSWEEQIFSKESIQVFENSGAKPT
PCSTYRLRLDLEPGTGASEDLCSAETVQGFAGTLVPLLLEVWVEAVGGGRAQTDSRHLLS
EEAMALMFQILTILQLLRRLAPQKEQQDMLDSWFRNSYLNDFKQHFMRNFPYGQLEVARH
KKKMDGKRNRQQAIGGVNAAGTVEPLALNVMLCQVMVSLSLRGRDHIAGQDADWLGPIRA
FVTDTLSSGGKLSSKYLAALLEVVWRMTVTQRSRAVTEELLQAVYVQYQQKNLVLSVRTL
LLRFFSQLYIQEHQNQPHIARSRILTRWLVSLPLQLAQLGGRNPQLSAHVLQTVQSAAAW
GNKDLLHSLQTHAGSLYDPQEGCVVLLPMEQQQRLVQILFYLPAFPADVLACLSQVCNTG
RVSASLAATLIRTVHFRSPLSGWSSSSQDVPVRDVDYFSFLFSTLTGFSSERLRTLQQAD
DEALLPSSALSPLSVFTTPLEQFMHHWDVVEEVCHCLETLGSRGQCFEILQNGIIKNLCG
LVVVPDCTCAALLRCIPRLLDHNLLPNDTLLHFLADCCLSMLSLLLQLEQSARKRDAVWE
ACFAALSTVPRLLRLVLQSLRVCDLCEEELPLLAQILSLLLQHTQLRNHVAANAALLQTI
IQDLTRYHGGETREQWLTDLLYCYSVTLSSHRANIAMREIY
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtcaaagaagaagaaaaggcaagacgatttccataaagtcaagctgaaagtc
ggcaagaaaaagcccaaggcggaaaattcgactaacgtcaactttaaatcgaggagcatc
agtttaccggatcagctgaagcgagatgatggaggaccgactacacaccgacagctcagc
attaaggatctactgtcccagctgcaccattacagcagcacggtgaagcagggtgctctc
gtaggccttcgcgaactgctttcggctcatccatccctgctcgagcagcatgcctcggtt
gtactttccgaagtcgctgcactcttcaccgacaaagacggcgctgtgcgggcagccggg
tctcgcctcctgcgcttggtggcgcagtgcatgccggccgagcgcgttgctccgttcttc
cctctactgggcgctcacttgtcatgtgccatgacccatgtttcaaccagcattcaggag
gacgcgctgcgggtgctggacgtgctgctcgaacactatcccgccctgctagcacagaga
cacaccgtgctactctccaacttcctcgagctcatctcgcagaggcggataagtggcggc
atgagtaagggcggagccagtggaaaccgggcagagaaaggaagctatgcactttctata
agcactagccaatctgttacagcgcagcaatggagactcactgttttgctcaggttgggt
cggtttcttcaagcagtggtggaggagaggcctacagaggacggtgtagtttgtggtagt
ggctttgggatgtggagcggagagaaaggaatggtcacgcctgtagaagtcagctgggag
gagcagatattcagcaaagagagcattcaagtgtttgagaactccggagcaaagcccaca
ccgtgttcaacgtatcgtctgagactggatctagagcctggaactggagcaagcgaggac
ctgtgttcagcagagacagtgcagggtttcgctggtaccctggtgccgctcctcctggag
gtgtgggtggaggctgtgggcggaggacgagctcaaacagacagcaggcacctgctctca
gaggaagccatggcactcatgttccagatccttacaatactgcagctcctgagacgtctt
gctcctcagaaagagcaacaggacatgctggattcctggttccgaaattcatacctgaat
gatttcaagcagcacttcatgaggaatttcccctacggacagctagaggttgctagacat
aaaaagaaaatggatgggaagaggaacagacagcaggcgattggtggcgtaaatgctgca
ggaaccgtagaaccactggctctgaatgtcatgctgtgtcaagtaatggtgtctctcagc
ctgagggggcgggaccacatcgctggccaggacgctgactggctcgggccaatccgagcc
tttgtcacagacacgctgtcaagtggtgggaagctgagctcgaaatacctggctgccctg
ttggaggtggtttggaggatgactgttacacagagaagccgtgctgtgacggaggagctc
ctacaagcagtgtatgttcagtatcagcagaagaacttggtactgtctgtgcggaccctg
ttgctgcgtttctttagtcaactctacatacaggagcatcagaaccagcctcatatagcc
aggagcaggattttgacacgttggttggtgtctttgccgctgcagctggcgcagttgggt
ggccgtaatcctcagctgtccgcgcatgttttgcagacggtgcagtcagctgcagcatgg
ggcaacaaagacctgctgcacagcttgcagacacatgcaggcagcctttatgatcctcag
gagggctgtgttgtgttgttgccgatggaacagcaacagcgattggttcagatcctgttc
tacctgccagcgtttcctgctgatgttctggcctgcctcagtcaagtgtgtaacacaggc
agggtttctgcaagtcttgctgccacactcatccgcaccgtacacttcaggtctcctttg
agtggctggtccagcagttcgcaggacgtgccagtgcgggacgtggattacttcagtttt
cttttttcaacactgacaggtttctcatctgagaggctgaggaccctacaacaggcagac
gatgaggcactgctcccctcgtcagccctctcacccctcagcgtgttcaccactccactc
gagcagttcatgcaccactgggacgtagtcgaggaagtatgtcactgtttggagacgttg
ggttctcgagggcagtgttttgaaatcttacaaaatggcatcatcaagaacctgtgcggg
ttggtagtcgtgccggactgcacatgtgccgcgctgttgaggtgcattccacgcttgctg
gatcacaacctcctgcccaacgacacacttctccacttcttggctgactgttgtctgagc
atgctcagtctgctgctgcagctcgaacaaagcgcccgcaagagagatgcagtatgggag
gcctgttttgctgcactaagcacagtgccacgtcttttgcgactggttctgcagtctctc
cgtgtgtgtgacctgtgcgaagaggagcttcccctgctggctcagatcctctctctgctc
ctgcaacacacgcagctacgcaatcacgtagccgccaatgcggccttactgcagaccatc
atccaagacctgacgcgttaccacggtggagagacccgagagcagtggctaacagacctg
ctgtactgctacagcgtgacgctttcgagtcaccgtgccaacatcgccatgagggagatc
tattaa
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