KEGG   Silurus meridionalis (southern catfish): 124403842
Entry
124403842         CDS       T08004                                 
Symbol
arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
  KO
K18442  brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124403842 (arfgef1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smeo04131]
    124403842 (arfgef1)
Membrane trafficking [BR:smeo04131]
 Endosome - Golgi transport
  Arf GTPases and associated proteins
   Arf GTPase associated proteins
    124403842 (arfgef1)
SSDB
Motif
Pfam: Sec7 BIG2_C Sec7-like_HUS DCB Sec7-like_HDS Type_ISP_C
Other DBs
NCBI-GeneID: 124403842
NCBI-ProteinID: XP_046733592
LinkDB
Position
21:4061415..4103323
AA seq 1856 aa
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKAESEKLSPPAGESKS
SSSTLPPIKSKTTFIEADKYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTGSAPDNT
APGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALTNHKISWSMASRKRDRQLQEAKQMER
ERHRQHSPLSQQEPESPQQLPDTPAKSQSLSCQEVNGGSAVVGGTPERDSPHYESPETEN
GSDFGPVENEQTEADQATAAEQSAAERASHAPGEEEGLNYEEKAQEIVQSILKEVVSTVI
GDAKESGEGDVEPETTPTSLEEECGLSSDSENVHANGIPGTPISASFTPSLPDDRLSVSS
SDTQESGAPAGPAPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKVLSL
QLLLSILQNAGPIFKTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKT
HLKMQIEVFFKEIFLYILETSTSSYDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAAN
IFERLVNDLSKIAQGRGGHELGTTPLQELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQ
TSLGQEKPSEHEANESKHSETINRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQ
QKEIIEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDSVQAGEFLGDNDR
FNKEVMYAYVDQMDFQGKDFVSALRLFLEGFRLPGEAQKIDRLMEKFAARYLECNQRQTL
FASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYITMNRGINDSKDLPEDYLSSIYNEI
AGKKISMKETKELPLKSNKQSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTSA
THLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAY
VQALARFTLLTASSGITEMKQKNIDTIKTLIMVAHSDGNYLGNSWHEILKCISQLELAQL
IGTGVKTRYISGTVRGKDGFITSTKEQSQDEYMGLVGGNVDRKQIASIQESIGETSSQSV
VVAVDRIFTGSIRLDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIR
LQWSRIWEVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFE
HIMKKNRSPTIRDMVVRCIAQMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTT
GHIVTNVFEKHFPATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSDRPQAF
KDYTSDDMNVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTYEK
HWWQDLFRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYFESLSDVLLDNI
LSQLYWCVQQDNEQLARSGTNCLENVVILNGEKFTPEIWDKTCNCMLDIFKTTIPHALLT
WKPAGGDADHVLDLDKQLDSVSQKSVDIQTRTDDQHSVSSIEKALAENRRQSQFGLSIEV
QEQRLFAALLIKCVVQLELIQTIDNIVFFPATSKKEDAENFAAAQRDSLDADVHVETQDQ
GIYRYLTSEQLFKLLDCLLESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLA
CGLRILFRMYTDPSRQDAWEEVQRRLLNVCSDAVAYFLTLTSESHREAWTNLLLLFLTKV
LKISDERFKAHATCYYPLLCEIMQFDLIPELRAVLRKFFLRIGLVFHIARTLEPEA
NT seq 5571 nt   +upstreamnt  +downstreamnt
atgtatgaaggcaaaaagacgaagaacatgtttctaacccgagctctggagaagatcttg
gccgataaggaggtgaagaaggcgcatcactcccagctgcgcaaagcctgtgaggtcgct
ttggaggaaataaaagcggaatcagagaaattaagcccccctgccggagagagcaagtcg
agttccagtaccctgcctcccatcaaatccaagaccaccttcattgaagcggataagtac
ttcctgccgttcgagttagcctgtcagtccaaatgtcctcgcatcgtcagcacgtcgcta
gactgtttacagaaactcatagcttatggtcacctgacgggcagcgccccggacaacact
gctccggggaagaagctcatcgacaggatcatcgaaaccatctgcggctgctttcagggc
ccgcagaccgacgagggagttcagcttcagatcataaaggccctgctgactgctgtgacc
tcgcagcacatcgagatccacgaaggcacggtgctgcaggccgtccggacgtgctacaac
atctacctggcgagcaagaacctcatcaaccagacgaccgctaaagccaccctcacccag
atgctcaacgtcatcttcgcccgcatggagaaccaggcccttacaaatcacaagatcagt
tggtctatggcgtccagaaagcgagaccgtcagctccaggaggccaagcagatggagaga
gagaggcacaggcagcattctccactcagccaacaggagcctgaatctccacagcagctc
ccagatacccccgccaagagccagagcctgtcatgtcaggaggtcaacggagggtcagcg
gtggtgggcggtaccccagagcgcgattcgccgcactacgagagcccggagaccgagaac
ggctccgacttcggccctgtagagaacgaacagacggaggcagaccaggcaactgcagca
gaacagagtgcagccgagcgtgcctctcatgcccctggagaggaggaaggcctgaattat
gaggagaaggctcaggaaattgtgcagagcatactgaaggaagtggtcagcacggtgatt
ggagacgctaaggagagtggagaaggggacgtggagccagagaccacgcctacatcgctc
gaggaggagtgcggcctgagcagcgacagcgagaacgttcatgctaacggcatccccggg
acgcccatctccgccagcttcactccgtctctgcctgacgacagactgtccgtctcctcg
agcgacactcaggaatccggtgctccagcgggtcctgccccaggcgcgaagttctcgcat
attctgcaaaaagacgccttcttggtgttccgctccctctgcaagttatccatgaagccc
ctttcggacggcccgcctgatccaaagtcccacgagctgcgctccaaagtgctctcgctc
cagctgctgctctccatcctgcagaatgcaggccccatcttcaagaccaacgagatgttc
atcaacgccatcaagcagtacctgtgcgtggcgctgtccaaaaacggcgtctcctccgtc
cccgaggttttcgagctgtccctgtccatcttcctgacgctcctgtccaacttcaaaacc
catctcaagatgcagatcgaggtgtttttcaaagagattttcctctacatcctcgagacg
tccacaagctcgtacgaccacaaatggatggtcattcagactctgaccagaatatgtgca
gatgcccagagtgtggtggacatctatgtgaattatgactgcgacctgaacgctgctaac
atattcgagaggctggtgaacgacctgtcgaagatcgcacagggccgaggaggccatgag
ctgggcacgaccccactgcaggagctgactttgagaaagaaaggtctggaatgtctcgtc
tcgatcctcaagtgcatggtggagtggagtaaggatcagtacgtgaaccctaactcccag
accagtctcggccaggagaaaccttctgagcacgaggccaacgagtccaagcactcagag
accattaaccggtatggcagcattaactctttggactccacggcttcctcgggtatcggc
agctacagcacgcagatgtcaggcaccgataacccagagcagtttgaagtgcttaaacag
cagaaggaaatcatcgagcaaggcattgacctgttcaacaaaaaaccaaagaggggcatc
cagtatctgcaggagcaaggcatgctgggaacaaccccggaggacatcgctcagttctta
caccaggaggagaggctagattctgtccaggcaggagagtttctgggagacaatgatcgc
ttcaacaaagaagtgatgtacgcctacgtggaccaaatggactttcaagggaaggacttt
gtgtccgccctgcgtctgtttttggagggtttccggctccctggagaagcgcagaaaatc
gatcgtctgatggagaaatttgctgctagatatttagagtgcaaccagcgacaaaccctg
tttgcgagtgcagacacggcgtacgtcctcgcgtattcaattatcatgttgactacagac
cttcatagtccgcaggtgaagaataaaatgacaaaagagcaatacataacgatgaatcga
ggcatcaacgacagcaaagatttgccggaggactatttgtcttccatctacaatgaaatc
gcgggaaagaagatatctatgaaggagacgaaggaattgcccctcaaatctaataaacaa
agcgtggccagcgagaaacagcgacggctgctgtacaacgtggagatggagcagatggcg
aagacggctaaggctctgatggaagcagtgagccacgtccaggctccgttcaccagcgcc
acccacctggagcacgtcaggccaatgtttaagttggcctggacacctttcctggcggcc
ttcagcgtcggattgcaggactgcgatgacaccgaggttgcctctctgtgcctggagggg
atccgctgcgccataagaatagcctgcatcttctccatacagttggagagagatgcgtat
gtgcaggctctggctcgcttcaccttgctcacagccagctctgggatcacggagatgaag
cagaagaacattgatactatcaagacccttatcatggtggctcacagtgatgggaattac
ctgggaaactcgtggcatgagattctaaagtgcattagtcagttggaactggcccagctc
attggcacaggggtgaagactcgctacatatccgggactgttcgaggcaaagatggtttc
atcactagcaccaaagagcagagtcaagatgagtatatgggcctcgttggtgggaacgta
gatcggaagcagattgctagcattcaagaatctattggagagaccagctcgcaaagtgtt
gtggttgctgtggacaggatattcacaggatccattaggttggatggaaatgctatagtt
gatttcgtgcgatggctgtgcgccgtgtccatggacgagctggcctctccgacccacccg
cgcatgtttagcttgcagaagatcgtggagatttcctactacaacatgggccgcattagg
cttcagtggtccaggatctgggaagtgatcggagatcatttcaacaaggtgggctgtaat
cccaacgaggatgtcgccatctttgctgtggattcgctcagacagttgtctatgaagttc
ttggagaagggagaactggccaattttagatttcagaaggatttcctgaggccgtttgaa
cacatcatgaagaagaacagatcgcccaccatccgagacatggtggtacgctgcatagct
cagatggtgaactcgcaggcggcgaacatccgctcaggctggaagaacattttctccgtg
ttccatttggcagcttcagatcaggacgagagcattgtggagctcgcctttcagaccact
gggcacatcgtcacgaatgtattcgagaagcactttcccgccaccatcgactccttccag
gacgctgtgaagtgcctgtccgagttcgcctgtaacgcttcgttccccgacaccagcatg
gaggccatccgtctgatacgccactgcgccaaatacgtctccgaccggcctcaggcgttt
aaagactacactagtgacgatatgaatgtagccccagaggaccgggtgtgggtccgaggc
tggttccccatcctgttcgagctctcctgcatcatcaacaggtgcaagctggacgtcagg
accaggggtctgacggtgatgttcgaggtgatgaagacttacggtcacacgtacgagaaa
cactggtggcaagacctgttccggatcgtcttcagaattttcgataacatgaagctaccc
gagcaacagactgagaaagcagagtggatgaccacaacctgcaaccacgcactttatgcc
atctgtgacgtcttcacgcagtacttcgagtctctcagcgatgttctgctggacaacatc
ctctctcagctctactggtgtgtgcagcaagataacgagcagctggcgaggtccgggacc
aactgcttggagaatgtagtgatcctgaacggagagaagtttacgcccgagatctgggac
aagacgtgcaactgcatgctagacatcttcaagaccaccatcccacacgcgttgctgacg
tggaagccggccggaggggacgccgatcacgtgctcgacttggacaaacaactagactcc
gtctcccagaagtctgtggatattcagacccggacagacgaccagcactctgtgagcagc
attgagaaggcgctggctgaaaaccggagacagagccagttcggtttgtctatagaagtc
caggagcagaggctgttcgcagcactgctcatcaagtgtgtggtgcagctggagctcatc
cagaccatcgataacatcgtcttctttccggccaccagcaagaaggaggacgcggagaac
ttcgcagcagcgcagagagactctctggacgccgacgtccacgtggagactcaggatcag
ggaatttaccgctacctgacctccgagcagctgtttaaactgctggactgcctgctggag
tcacaccgcttcgctaaagccttcaactccaacaacgagcagaggacagcgctgtggaag
gccggttttaaagggaagtccaaacccaacctgctgaaacaggagacgagcagtctggcc
tgcgggctgcgcatcctcttccgcatgtacactgatcccagcagacaggacgcctgggag
gaggtgcagagacgcctgctcaacgtgtgcagcgacgccgtggcgtatttcctcacgctt
acgtcagaaagtcaccgcgaggcctggaccaacctcctgctcctcttcctcaccaaagtg
ctgaaaatcagcgatgagcgcttcaaggcccacgccacctgttactaccccctgctgtgc
gagatcatgcagttcgacctgatccccgagctcagagccgtgctgaggaagttcttcctg
cgcatcgggctcgtgttccacatcgctcgcacactcgaacccgaggcctag

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