Silurus meridionalis (southern catfish): 124403881
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Entry
124403881 CDS
T08004
Symbol
cspg5a
Name
(RefSeq) chondroitin sulfate proteoglycan 5 isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
smeo00535
]
124403881 (cspg5a)
Proteoglycans [BR:
smeo00535
]
Cell surface proteoglycans
Others
124403881 (cspg5a)
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Gene cluster
GFIT
Motif
Pfam:
Neural_ProG_Cyt
EGF
YxzE
TMEM213
Motif
Other DBs
NCBI-GeneID:
124403881
NCBI-ProteinID:
XP_046733674
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Position
21:18605687..18628124
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AA seq
521 aa
AA seq
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MKRNMGFYSGCWISVMSALLALLLIPLEARANTVLGNMSEPANPLNSTSVAEEHDKAKLD
GREMSKPLSNMFLILRSGRKPRDGGELGSGLQEDDDTLTSTPSPEEVTTEDVKISLDSAE
TDHLLPGVIKKDLLPSESTKIQWQGTEETMESTVFDLDGNQESDPDPQETPTPVTTLPSH
TESFTVDFLDPRSRVNDFIHPSPTAHELQGREPTSWAIPNSHDYLTPHDQTPDSPSSEED
TTKPDDYDDDLPTSPPPPPPRNFHPHFPNPFVPAREKELPTNRDKVGKSSSAECRLGSVL
VNGTCKSQCEMTPNYCFNGGQCFVLEGTGVFCRCNIQDYVWHKGARCEAVITEFQVMCIA
IGASALTVLLLFMIVVCFAKKLHVLKTENNKLRKRSSSKYRPSSEQHNDNFSLSTIAEGS
NPNVRKLCDSPPHARALAYYDNIICQKTMSRYTWECKTKEEPSLEDDPNSQNKMEDAVKS
PPPKEDESLNIQNSLTPKHENHKVLGEENSSEVNSLQNNMM
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaacatgggcttctactcaggatgctggatctctgtcatgtctgcgctcctc
gcgctgctcctcatcccgctggaggcacgcgcgaacaccgtgttgggaaacatgagtgag
ccagcgaaccctttaaactcgacctccgtggcagaagaacatgacaaggcaaagctggat
ggtcgtgagatgtccaaaccactcagtaacatgttcctcatcctgcgttctggacgcaag
cccagagatggaggtgagctcggaagtggacttcaggaagacgacgatactctgacctcc
actccatcccctgaagaagtgacaactgaggacgtaaaaatcagccttgattctgcagag
actgaccatcttctgcctggagtcatcaaaaaggatcttcttcccagtgagtcgactaag
atccagtggcagggcactgaggagacaatggagtctacagtgtttgatctggatgggaat
caagaatcggacccggacccacaggagactccgactccagtgaccacgttaccgtcccac
acagagtccttcactgtggatttcctagaccccagatcccgtgttaatgacttcattcat
ccgtctcctactgctcacgagcttcagggtcgtgaacccacctcttgggcgatacccaac
agtcatgactacctcactccgcatgaccaaactccagactctccatcctcagaagaagac
accactaaaccagacgattatgatgatgatctgcccacctcacctccaccacctccaccc
aggaacttccaccctcacttcccaaatcccttcgttcctgctcgggaaaaagaactgccc
actaaccgtgataaggtgggcaaaagcagcagtgctgagtgccggctgggctctgtgctc
gttaatggaacatgcaagtctcagtgcgagatgactccaaattactgctttaacgggggc
cagtgcttcgttctagaaggaaccggagtcttttgcaggtgtaacattcaggactacgtg
tggcacaaaggcgctcgctgtgaggcggtcatcaccgagttccaggtcatgtgcatcgcc
atcggagcctcggccctcaccgtgctgctgctcttcatgatcgtcgtctgcttcgccaag
aaactgcacgtgctcaagaccgagaacaacaaactacgcaaacgcagcagcagtaagtac
cgcccatcatcggagcagcacaatgataatttctctctgtccaccatcgctgagggctcc
aacccaaacgtaaggaaactgtgcgactctcctcctcatgctcgtgctttggcttactat
gataacattatctgtcagaaaacgatgagcagatacacctgggagtgtaagaccaaagag
gagccgagcctcgaggatgatccgaactcccagaataagatggaggatgcagtgaagtct
cctccgcccaaagaagacgagtctctgaacatccagaactcactcactccaaaacatgag
aaccacaaggtgctgggtgaagagaactcatcggaggtaaactcgctgcagaataacatg
atgtag
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