KEGG   Sinorhizobium meliloti RMO17: DU99_00025
Entry
DU99_00025        CDS       T03395                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
smer  Sinorhizobium meliloti RMO17
Pathway
smer03030  DNA replication
smer03430  Mismatch repair
smer03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:smer00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DU99_00025
   03430 Mismatch repair
    DU99_00025
   03440 Homologous recombination
    DU99_00025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smer03032]
    DU99_00025
   03400 DNA repair and recombination proteins [BR:smer03400]
    DU99_00025
Enzymes [BR:smer01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DU99_00025
DNA replication proteins [BR:smer03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DU99_00025
DNA repair and recombination proteins [BR:smer03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DU99_00025
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1 Rv2179c-like
Other DBs
NCBI-ProteinID: AIL97852
UniProt: A0A222HMH1
LinkDB
Position
3574..4302
AA seq 242 aa
MREIIFDTETTGLDNREDRVIEIGGIELENQFPTGRTIHIYINPGERKVHPEALAVHGIT
DEFLKDKPPFADVAQEIVDFFGDARWVAHNATFDIGFINAEFERLGLPPIGSDRVIDTLA
LARRKHPMGPNSLDALCRRYGVDNSHRTRHGALLDSELLAEVYIEMIGGRQAALGLVVTE
AGDRPIEADDGPVVVVTRERPLRPRLTEAEIAAHAALVAKIGANAIWSKYSEADDVLRSE
AV
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcgtgaaatcatctttgatacggaaacgaccggcctcgacaaccgcgaggaccgggtg
atcgagatcggcggtatcgagctcgagaaccagtttccgacggggcgcacgatccatatc
tatatcaatccgggggagcgcaaggttcacccggaagcgctggccgtccacggtatcacc
gacgagttcctgaaggacaagccgcccttcgccgatgtcgcccaggaaatcgtcgatttc
ttcggcgatgcccgttgggtcgcccacaacgccaccttcgacatcggcttcatcaatgcg
gagttcgagcggctcggcctgccgccgatcggcagcgaccgggttatcgacactctggct
cttgcccgccgcaagcacccgatggggccgaattcgctcgatgcgctctgccgtcgctac
ggtgtagacaactcccatcgaaccaggcacggagccctgctcgactccgagctgctggcc
gaggtctatatcgagatgatcggcgggcgccaggccgcgctcggtctcgtggtgacggag
gcaggtgaccggccgatcgaggctgacgacggaccggtcgtcgtggtcacaagggaaagg
cctctacggccacggctgacggaggccgagatcgccgcccatgcggcgctcgtcgcgaag
atcggcgcgaatgcgatctggtcgaagtacagcgaagccgatgacgttctcagatcggaa
gctgtctag

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