Sinorhizobium meliloti RMO17: DU99_01190
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Entry
DU99_01190 CDS
T03395
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
smer
Sinorhizobium meliloti RMO17
Pathway
smer03030
DNA replication
smer03430
Mismatch repair
smer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DU99_01190
03430 Mismatch repair
DU99_01190
03440 Homologous recombination
DU99_01190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smer03032
]
DU99_01190
03400 DNA repair and recombination proteins [BR:
smer03400
]
DU99_01190
Enzymes [BR:
smer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DU99_01190
DNA replication proteins [BR:
smer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DU99_01190
DNA repair and recombination proteins [BR:
smer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DU99_01190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
AAA_30
AAA_5
AAA_14
AAA_19
AAA_24
RuvB_N
AAA_18
SKI
TsaE
SRP54
DUF815
Rad17
AAA_assoc_2
AAA_28
CbiA
RNA_helicase
nSTAND3
ABC_tran
AAA_2
AAA_17
Motif
Other DBs
NCBI-ProteinID:
AIL98072
LinkDB
All DBs
Position
256031..257911
Genome browser
AA seq
626 aa
AA seq
DB search
MSDEAPTSSPILPVEKPAAYRVLARKYRPKDFSDLMVGQEPMVRTLTNAFETGRIAQAYM
LTGVRGVGKTTTARILARALNYKTAEIDKPTIDLRVPGEHCQAIMDGRHVDVIEMDAASH
TGIDDIREIIEQVRYRPVSARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFATTE
IRKVPITVLSRCQRFDLRRISASDLVGLFSTILGKEGVPFDPEALAMVARAAEGSARDGL
SLLDQAIAHGGGSVEIETVRSMLGLADRARIVDLFEHVIKGDVAGALDEFAAQYEAGANP
TVVLTDLADFTHLVTRLKYVPDAVNDQSLSEIERTRGAEFAGSVAVTTLSRVWQMLLKGI
PEAESSARPAGAAEMVLIRLAHAAHLPSPEEAARRLLDLSGGEGGGRPAPNGGGGGGGAQ
APAGTPVEARAVETAVSRPSGNGATMLRAVPSSAPPQPISVGRIEERTVASAAAKPEPKV
PVNSIGDIADLCAKNRDIKLKTMVRGFLRLVHIEPGRLDVNLPDDAPKTLLNELAVKLKE
WTGIHWVVSYSREQGEPTLVEAEQRAQEQRVNDARQDPDVAAILARFPGARITDVRIRAA
EEELESLAPAAAESEDGDIVPDDDIE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgaagcgcccacttcatccccgattttacccgtcgagaaaccggccgcctac
cgtgttctggcgcgcaaataccgccccaaggacttctccgacctgatggtcggccaggag
ccgatggtgcgcacgctcaccaacgccttcgaaaccggccgcatcgcccaggcctacatg
ctgaccggcgttcgcggcgtcggcaagacgacgacggcgcgtatcctggcacgggcgctg
aactacaagaccgccgagatcgacaagcccaccatcgacctgcgcgtccccggcgaacat
tgccaggcgatcatggacggccgccatgtcgacgtgatcgagatggacgccgcctcgcat
accgggatcgacgatatccgcgagatcatcgagcaggtacgctatcggccggtctccgcg
cgctacaaggtctatatcatcgacgaagtgcacatgctctcgacgcaggccttcaatggc
ctgctgaagacgctcgaagagccgccggagcatgtgaagttcattttcgccacgaccgaa
atccgcaaggttccgattaccgtcctgtcgcgctgccagcgcttcgatctccggcgcatc
agcgcttccgatctggtcggcctcttctccaccattctcggcaaggagggcgtgcccttc
gatccggaggcgctggcgatggtggcgcgggcagcggaaggctcggcgcgcgacggcctg
tcgctgctcgatcaggcgatcgcccatggcggcggttcggtcgagatcgaaaccgtgcgc
tcgatgctcggccttgccgatcgggcgcggatcgtcgacctgttcgagcatgtcatcaag
ggcgatgtcgccggcgcgctcgacgagttcgccgcgcaatacgaagccggcgccaatccg
accgtggtcctcaccgaccttgccgacttcacccacctcgtgacaaggctgaaatatgtg
ccggacgcggtcaacgaccagtcgctgagcgagatcgagcgcacgcgcggggccgaattc
gccggcagcgttgccgtgacgacgctttcgcgcgtctggcagatgttgctcaagggcatt
cccgaggcggagagctctgcgcgccccgcaggtgctgccgagatggtgctgatcaggctc
gcccatgccgcccatctgccttcgcccgaagaggccgcgcggcggcttctcgatctttcg
ggcggcgaaggcggcggtcgcccggccccgaacggcggtggtggcggcggcggtgcgcag
gcgcctgcaggcacccccgtcgaggctcgcgccgtggagacggcagtctcgcgtccaagc
ggtaatggcgcgaccatgctgcgcgccgtgccgagctccgcgccgccccagccgatcagt
gtcggccgcatcgaagagcgcacggtcgcgagcgccgctgcgaaacccgaaccgaaggtt
cccgtcaattccatcggcgacatcgctgatctctgcgccaagaatcgcgacatcaagctg
aagacgatggtgcgcggtttcctgaggctcgtgcatatcgaacccggccggctcgacgtc
aatctgcccgacgacgcaccgaagacgctgctgaacgaactcgccgtcaagctcaaggaa
tggacgggtatccattgggtcgtgagctacagtcgggagcagggcgagccgacccttgtc
gaggcagagcagcgcgcgcaggagcagcgcgtcaacgatgcgcgccaggacccggacgtc
gctgccattcttgcgcgctttcccggggccaggatcaccgacgtgcgcatccgcgcggcg
gaagaggagctcgagagcctcgctccggccgcggccgaatccgaggacggcgacatcgtc
ccggacgacgacatcgagtag
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