Sinorhizobium meliloti RMO17: DU99_01265
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Entry
DU99_01265 CDS
T03395
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
smer
Sinorhizobium meliloti RMO17
Pathway
smer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DU99_01265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smer03019
]
DU99_01265
03016 Transfer RNA biogenesis [BR:
smer03016
]
DU99_01265
Enzymes [BR:
smer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DU99_01265
Messenger RNA biogenesis [BR:
smer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DU99_01265
Transfer RNA biogenesis [BR:
smer03016
]
Prokaryotic type
tRNA degradation factors
DU99_01265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AIL98086
UniProt:
A0AAW9TMF2
LinkDB
All DBs
Position
273230..275383
Genome browser
AA seq
717 aa
AA seq
DB search
MFETHKVEIEWAGRPLKLETGKIARQADGAVLATYGETVVLATVVSAKAPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPDGYKNDTQVIITVMQH
DLENNPDVVAMVAASAALTLSGVPFMGPVGGARVGYINGEYVLNPHLDEMDESTLDLVVA
GTQEAVLMVESEAKELPEDVMLGAVVFGQKGFQPVIDAVIRLAEVAAKEPREFNPEDHSA
LENAMLSIAEDELRNAYKITEKAARYAAVDAVKAKVKEHFLPEGVENPAHTAEEIAAVFK
HLQAKIVRWNILDTKSRIDGRDLVTVRPIVAEVGILPRTHGSALFTRGETQAIVVATLGT
GEDEQYVDSLTGMYKENFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPTA
EQFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLIKEDDRFAVL
SDILGDEDHLGDMDFKVAGTDAGITSLQMDIKIEGITEEIMGVALNQAKGGRLHILGEMA
KAISESRGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIDDDGTVKIA
SASAKEIEAARKWIHSIVAEPEVGQVYEGTVVKTADFGAFVNFFGARDGLVHISQLASER
VAKTTDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQATGKEVVAEKSEKKDGGEAAE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagacacacaaggtagaaatcgaatgggctgggcgtccgctcaagctcgaaacc
ggaaaaatcgcgcgtcaggccgatggtgccgttctcgcgacctacggcgaaaccgtcgtg
ctcgccacggtggtttcggcgaaggcaccgaagccaggccaggatttcttcccgctcacc
gtcaactatcaggaaaagacctacgctgcgggcaagatccccggcggctatttcaagcgt
gagggccgccccagcgaaaacgagacgctggtgtcgcgtctgatcgaccggccgatccgt
ccgctcttcccggacggctacaagaacgacacccaggtcatcatcacggtcatgcagcat
gacctcgagaacaacccggacgtcgtcgcgatggttgcggcatccgctgcattgacgctt
tccggcgttcccttcatgggtccggtcggcggtgcccgcgtcggctacatcaacggcgaa
tacgttctcaacccgcatctcgacgaaatggacgaatccacgctcgacctcgtcgtcgcc
ggcacgcaggaagcggtgctgatggtggaatcggaagcgaaagagctgccggaagatgtc
atgctcggcgccgtcgttttcggccagaagggcttccagccggtgatcgacgctgtcatc
aggcttgcggaagttgccgccaaggagccgcgcgaattcaatccggaagatcactccgct
ctcgaaaatgcgatgctctcgatcgccgaagacgagctgcgcaacgcctataagatcacc
gagaaggccgcgcgctatgccgccgtcgatgcggtaaaggcaaaggtcaaggagcatttc
ctgccggaaggcgtcgagaacccggcccataccgccgaagagattgccgctgtcttcaag
cacctgcaggccaagatcgttcgctggaacatcctcgacacgaagagccgcatcgatggc
cgcgacctcgtcacggttcgcccgatcgtcgccgaagtcggcatcctgccgcgcacgcac
ggttcggcgctctttacccgcggtgaaacgcaggcgatcgtcgttgccacgctcggcacc
ggcgaagacgagcagtatgtcgattccttgactggcatgtacaaggaaaacttcatgctg
cattacaacttcccgccctattcggtcggtgaaaccggccgcatgggttctccgggccgc
cgcgaaatcggccacggcaagctcgcctggcgcgccatccatccgatgctgccgaccgcg
gaacagttcccctacacgctgcgcgtcgtttccgagatcaccgagtccaacggttcgtcc
tccatggcaaccgtctgcggcacgtcgctcgcactgatggacgcgggcgttccgctcgcc
aagccggttgccggcattgccatgggcctcatcaaggaagacgaccgtttcgccgtcctc
tccgacattctcggcgatgaagaccacctcggcgatatggacttcaaggtcgcgggcacg
gatgccggcatcacctcgctgcagatggacatcaagatcgaaggcatcaccgaagaaatc
atgggtgttgccctcaaccaggccaagggaggccgcctgcacattctcggcgaaatggcc
aaggccatctccgagagccgcggccagctcggcgagttcgcaccgcgcatcgaagtcatg
aacattccggtcgacaagattcgtgaagtcatcggctcgggcggcaaggtcatccgcgaa
atcgtcgaaaagaccggcgccaagatcaatatcgacgacgacggcaccgtcaagattgcg
tcggcttccgccaaggagatcgaggccgcccgcaagtggatccactcgatcgtcgccgag
ccggaagtcggtcaggtctatgaaggcactgtcgtcaagacggccgatttcggcgccttc
gtcaacttcttcggcgcccgcgacggcctcgtccacatctcgcagctcgcttccgagcgc
gttgccaagaccaccgacgtcgtcaaggaaggcgataaggtctgggtcaagctgatgggc
ttcgacgagcgcggcaaggttcgtctctccatgaaggtcgtagaccaggcgaccggcaag
gaagtcgttgccgagaagagcgaaaagaaggacggcggcgaagccgccgagtaa
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