Sinorhizobium meliloti RMO17: DU99_05505
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Entry
DU99_05505 CDS
T03395
Name
(GenBank) autotransporter
Organism
smer
Sinorhizobium meliloti RMO17
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Paralog
GFIT
Motif
Pfam:
Autotransporter
AC_1
Pertactin
Motif
Other DBs
NCBI-ProteinID:
AIL98886
LinkDB
All DBs
Position
complement(1146042..1150277)
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AA seq
1411 aa
AA seq
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MIPAGPVLASVGFTLAIGAGAVSPAHAINECGPAIGGVVTCNTSTYPKGPGTHIEYRIDT
GLRATIDSVAVRWADDAGSDRPAIDIRSDKVTSEGDLIVTIEGSTVTTGEPDRIGTRSDR
EVGEYADGLRVTQRGAGLVSATMLSGSIITYGYNAAGIYAWQPGANENNKSDVIADFSGE
DSTIETFGSYSQGIYGRTETGIGNVAVTAKDGTIVTHGLSSIGVRGLKHSASLGDGDVTV
AGDNITVTTGGNLSIGMEARVEDSKSGRGNASVFVRNEAAIETSGTRAHGAQAFNLDPGD
STVVLEKSKITTRGEGAIGIRAEAGDGNAVTEVTKGSIATAGASAIGLAAISQGNMGEAR
VSLDGGDVSTGGDNAEGLIATAKGAGGTATARLVDGNVKTAGRDAEGLIAHAGDESIPTS
INADASVIMQAGSITTTGDGAGGMIAETDIGPTPSTGKATAVQRAGTIMTSGGEIGGNEG
SYAIAALSFGSGLASIEQAGGSATTAGAQSHALYALSIFGNTMVTQAAGSSAVATGAKAS
GLRALAGPGGGNEVTLDGKVTAGSAPAVHTIGSAGSKITIGSAAEIDGSASGTAIRDGDS
DLDAADETGGNSTATLAGKVTGDVVMGLGNDIINLTGGVLDGDVYGDDRLATAADGDDSF
TWSGGTWLSSFFGGNGSDTATVSAQSYDGTHHYLDGGDDVSTADGWTDRLNLSGVTASAN
GANIVNWEIVTLDAADVTILDGALEAGSEPETGLFLTNGSVLNGSDAFALAGNMAIDGTS
QFIAFGEDIANGVYSISGNLVNAGTVDMQDGGTGDVLSVGGNYTGAENSTVYIDTYLGDD
ASPTDHITVGGDTAGSTAISIGNAGGPSAQTVAGIRVVGVAGASSGTFVLANANSEIKET
GEAAITRGAYAYALRQVDNDDWFLQSTLAEDDTGPDTGGEQAVDPETEGGETVDPGTGGG
ETVDPGTGGGETVDPGTGGGETVDPGTGGGETVDPGTGGGETVDPGTGGGETVDPGTGGG
ETVDPGTGGGETVDPETGGGETVDPGTGGGETVDPGTGGGETVDPGTGGGETVIPSYNQG
VPVYETYARNLLGFIQLPTLRRRASGERVPALRSCGSVPLNVEGNQTAACAEDNTVWARI
DGTRAHVEPEESGARVSEYDSRSWLLQAGIDALLHSSGKGELIGGLTAHYGGINTDVSSF
YGDGSIDTRGYGLGATLTWYGQNGFYLDGQGQLTRFDSDLDSDILGRLADGNDGLGYAVS
IEAGHRIGLGDTWALTPQAQLVNTSVNFDDFVDPYGARVSLDDGNSLRGRIGLALDREQQ
WQGAEGDGRSSRLYGTIDLYREFLGDTRADVSGVSFGIEADDWIGEIGIGGSYNWGDDKY
SLYGEARASTGLFDFGGSYAVRASVGLKMKF
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgatccccgcaggcccggtccttgcatcggtcggctttacgctcgcgatcggagcaggc
gccgtgagcccggcccatgcgataaacgaatgcggcccggccattggcggagttgtgacc
tgcaacacgtccacttacccgaaggggcccggaacccatatcgaatatcgtattgatacc
ggactgagggcgacgatcgacagcgtggcggtcagatgggcggacgatgcgggcagcgat
cggcctgcgatcgacatccgttcggacaaggtcacgagcgaaggcgatctcatcgtgacg
atcgagggctcgacggtgacgaccggcgagccggacagaattggaacacgctccgacaga
gaggtaggcgagtacgccgatggattgagagtgacgcagcgcggtgcggggctcgtttca
gcgacgatgctgagcggcagcatcatcacatatggatacaacgcagcgggaatttacgcc
tggcagcccggggccaacgaaaacaacaagagtgatgtgatcgccgatttctcgggagaa
gattccacgatcgagaccttcggatcctactctcaaggtatctatggccgcacagaaacc
ggcataggcaatgtcgcggtgacggcgaaggacggaacgatcgtcacccatggcctgtcg
tcgataggcgttcgcggactgaagcatagcgcgtccctgggagacggcgacgtgaccgtt
gccggcgacaacatcacggtaacgaccggcggaaatctaagtatcggtatggaggcgaga
gtcgaggacagcaagtccggcaggggcaacgcttcggttttcgtccgcaacgaggcggcg
atcgagacctcgggcacaagggcacatggcgctcaagccttcaatctggacccgggtgac
agcacggtcgttctggaaaagagcaaaatcacgacgcgcggcgagggtgctatagggatt
cgggccgaggcaggagacggcaatgccgttaccgaagtcaccaaaggaagcattgccacg
gctggagcatcggcgatcgggctcgcggccatcagccagggaaacatgggcgaggcgcgc
gtctcgctggacggcggagacgtctcgaccggcggggataacgcggaaggcctgatcgcg
accgcgaagggcgccggcggaacggccaccgcccgcttggtggacgggaacgtgaagacg
gccggtcgcgatgcagagggcctgatcgctcacgccggcgatgaaagtatcccgacgagc
atcaatgccgatgccagcgtgatcatgcaagccggcagcataacgaccaccggcgacggc
gcgggtggaatgatcgcagagaccgacatcggcccgacgccctcgacaggaaaagcaact
gccgtgcagcgggcaggcacgatcatgaccagcggcggcgagattggcggcaatgagggc
agctacgcaatcgcggcgctctccttcgggtccggcctggcttccatcgagcaggcgggc
ggcagcgctacgactgcgggggcgcagagccacgccttgtatgctctctcgatcttcggc
aacaccatggtcacccaggcagccggcagcagcgcggtcgcgaccggcgcgaaggcgagc
ggtctgcgggccctggcgggcccgggcggcggcaatgaagtaacgctggacggcaaggtt
accgctggctctgctcccgccgttcacaccatcggctccgcaggcagcaagatcaccatc
ggctccgctgcggagatcgacggttctgcttcgggcaccgccattcgcgacggcgactcc
gatctggatgcggcggacgaaacgggagggaattccaccgccacgcttgccggcaaggtc
accggcgatgtcgtcatggggctcggcaatgatatcatcaatctcaccggcggcgtgctc
gacggcgatgtctatggcgacgacaggttagccaccgccgctgacggcgacgacagcttc
acctggagcggcggcacctggctttccagtttcttcggcggcaacggctccgacaccgcc
accgtctccgcgcagagttacgacgggacgcatcactatctcgatggcggcgacgacgtc
tcgactgccgatggctggaccgaccgactgaacttgagcggcgtcaccgcgagcgccaac
ggcgccaacatcgtcaattgggaaatcgtcaccctggacgctgccgatgtcaccattctc
gacggcgcacttgaagccggctcggagcccgaaacgggcctgttcctgacgaacggctcc
gttcttaacggatcggatgccttcgcgctggccggcaacatggcgatcgacggtacttcg
caattcatcgccttcggcgaggatatcgccaacggcgtctattcgatctccggcaattta
gtcaatgccggcacggtcgacatgcaggatggaggaaccggcgacgttctgtccgtcggc
ggcaactacaccggcgcggagaatagcacggtctatatcgatacctatctcggtgacgac
gcgtctccaaccgaccacatcaccgtcggcggcgatacggctggcagcacagcgatcagc
ataggcaatgccggcggacccagcgctcaaacggtggccggcattcgtgtggtcggtgtg
gcaggcgcgtcctccggcaccttcgtcctcgccaacgcgaactccgaaatcaaggaaacc
ggagaggccgcgattacccggggcgcctatgcctatgcgctgcggcaggtcgataacgac
gactggttccttcagtcgacgttagccgaagacgataccggcccggacaccggaggcgag
caggctgtcgatccagagaccgaaggcggtgagaccgtcgacccgggaaccggaggcggc
gaaaccgtcgacccggggacaggaggcggcgaaaccgtcgacccggggaccggaggcggc
gaaaccgtcgatccggggaccggaggcggcgaaaccgtcgaccccgggaccggaggcggc
gaaaccgtcgacccggggaccggaggcggtgagactgtcgacccggggaccggaggcggc
gaaaccgtcgaccccgggaccggaggcggcgaaaccgtcgacccggagactggaggcggc
gaaaccgtcgacccggggaccggaggcggcgaaaccgtcgaccccggaaccggaggcggc
gaaaccgtcgaccccgggaccggaggcggcgaaacggtaatcccgagctacaatcagggc
gtgcccgtctacgaaacctatgcccggaacctcctgggcttcatacaactcccgacattg
cgccggcgtgcctccggcgagagagttcctgccttgcgctcctgtgggagcgtaccactg
aatgtcgagggcaatcagaccgccgcctgcgccgaggataataccgtctgggctcgaatc
gacggcacccgtgcccatgtggagcccgaggagagtggcgcccgcgtttcggaatacgac
tctcgttcctggttgctgcaggccggcatcgacgcacttctgcatagcagcggcaagggc
gagctgatcggcggcctgactgcccactatggcggcatcaacaccgatgtatcttccttc
tatggtgacggctccatcgacacccgcggctacggcctcggcgctaccctgacctggtat
ggccagaacggcttctatctggacggtcagggccagctaacccggttcgacagcgatctc
gactcggacattcttggccggcttgccgacgggaatgacgggctgggttatgcggtcagc
atcgaggcgggccatcgtatcggcctcggcgacacgtgggccctgacgccgcaggcgcaa
ctcgttaatacctcggtgaacttcgatgacttcgtggacccatacggggcgcgggtttca
ctcgatgacggaaatagcctgcgcggccgcatcggtctcgcactcgatcgcgagcagcaa
tggcaaggcgccgaaggcgacggtcgcagctcgcgcctctacggcaccatcgatctatac
cgtgagttcctgggcgatacccgcgcggatgtgtccggcgtctcgtttggcatcgaggcc
gatgactggattggcgaaatcggcattggcggcagctacaactggggagacgacaagtat
tcgctctatggcgaagcccgcgcatccaccggtctgttcgatttcggcggcagctacgcg
gtacgtgcatccgtcggactgaagatgaagttctga
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