Sinorhizobium meliloti RMO17: DU99_06780
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Entry
DU99_06780 CDS
T03395
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
smer
Sinorhizobium meliloti RMO17
Brite
KEGG Orthology (KO) [BR:
smer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smer03032
]
DU99_06780
03400 DNA repair and recombination proteins [BR:
smer03400
]
DU99_06780
Enzymes [BR:
smer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DU99_06780
DNA replication proteins [BR:
smer03032
]
Prokaryotic type
DNA Topoisomerases
DU99_06780
DNA repair and recombination proteins [BR:
smer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DU99_06780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
AIL99123
LinkDB
All DBs
Position
complement(1404960..1407644)
Genome browser
AA seq
894 aa
AA seq
DB search
MNVVVVESPSKAKTINKYLGPGYKVLASFGHVRDLPAKDGSVRPDEDFEMSWEVDGASAK
RMKDIADAVKSSDGLILATDPDREGEAISWHVLDLLRKKKVIGDKPVKRVVFNAITKKAV
LDAMAEPRDIDASLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR
EAEIERFVTEEYWNISALLKTPRGDEFEARLVSADGKRLPPKAIGNGEEANRLKSLLDGA
SYVVESVEAKPVKRNPSPPFTTSTLQQAASSKLGFSASRTMQVAQKLYEGVDIGGETVGL
ITYMRTDGVQMAPEAIEAARQAIGSQFGERYLPEKPRFYSTKAKNAQEAHEAIRPTDFDR
TPDQVRRFLDGDMLRLYDLVWKRGIASQMASAEIERTTAEIVADNAGKKAGLRATGSVIR
FDGFIAAYTDMKEDGEQADDGDEDGRLPEINARENLAKQKINASQHFTEPPPRYSEATLI
KKMEELGIGRPSTYAATVTTLIDRDYVEIDKRKLVPQAKGRLVTAFLESFFTRYVEYDFT
ASLEEKLDQISAGELNWKDVLRDFWKDFFSQIEDTKELRVTNVLDALNEELAPLVFPKRE
DGGDPRICQVCGTGKLSLKLGKYGAFVGCSNYPECNYTRQLSSDSNGDAEAAAANEPQSL
GKDPHTGEEITLRNGRFGPYVQRGDGKEAKRASLPKGWTPAAIDHEKALALLSLPRDIGP
HPESGKMISTGIGRYGPFVLHNGTYANLESVEDVFSIGLNRAISVLADKQSKGAGGGRAS
AAALKELGEHPDGGAITVRDGRFGPYVNWGKVNATLPRGKDPQSVTVEEALALIAEREAK
GGVTKGKAAKGKPTGGKSAGTKSAKAASAGTAKAEKPKSAAKTKTKAAAKAKKD
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgtagtggtggaatcgccttccaaggccaagacgatcaacaagtacctgggc
ccaggctacaaggtgcttgcctcgttcggccacgtgcgtgacctgcctgccaaggacgga
tcggttcgccccgacgaagacttcgagatgtcctgggaggtcgacggcgcttccgccaag
cggatgaaggacatcgccgatgcggtgaaatcgtccgacggtctcattctcgcgaccgac
cccgaccgcgagggcgaggcgatctcctggcatgtgctcgaccttctcaggaagaaaaag
gtcatcggcgacaagccggtcaagcgcgtcgtcttcaatgcgatcaccaagaaggccgtg
ctcgatgcgatggccgaaccccgcgacatcgatgcctcgctggtcgacgcatatctcgca
cgccgcgctctcgactacctcgtcggcttcaatctttcgcccgtgctctggcgcaagctg
ccgggcgcacgctcggcgggccgcgtgcaatcggtggcgctgcgcctcgtctgcgaccgc
gaggcggagatcgagcgcttcgtcaccgaagaatactggaacatctcggcgcttctgaag
acaccgcgcggcgacgaattcgaagcgcgcctcgtttcggccgacggcaagcggctgccg
ccgaaggcgatcggcaatggcgaggaagccaaccggttgaagtccctgctcgacggcgcg
agctacgtcgtcgagagcgtcgaggccaagccggtcaaacgcaatccctccccgcccttc
accacttcgacgctgcagcaggccgcctcctcgaagctcggcttctcggcatcgcgcacc
atgcaggtggcgcagaagctctatgaaggcgtcgatatcggcggagaaaccgtaggtctc
atcacctatatgcgaacggacggcgtgcagatggcgccggaagcgatcgaggccgcgcgc
caggccatcggcagccagttcggagagcgttatcttccggaaaagccgcgcttctattcc
accaaggcaaagaatgcccaggaagcgcacgaggccattcgcccgaccgatttcgaccgc
acgcccgaccaggtccggcgcttcctcgacggcgacatgctgagactgtacgatcttgtc
tggaagcgcggtatcgcgagccagatggcgtctgcggagatcgagcgcaccaccgccgag
atcgtcgccgacaatgccggcaagaaggcgggtctcagggcaaccggctcggtcatccgc
ttcgacggcttcatcgctgcctataccgacatgaaggaagacggcgagcaggcggatgac
ggcgacgaggacggccgccttccggaaatcaacgcacgcgaaaatcttgccaagcagaag
atcaacgccagccagcacttcaccgagccgccgccgcgctattcggaagcgacgctcatc
aagaagatggaagagctcggtatcggccgcccgtcaacctatgcggcgaccgtcacgacc
ctcatcgaccgtgactatgtggagatcgacaagcgcaagctggtgccgcaggcgaaaggc
cgtctggtcactgcgttcctcgaaagcttcttcacccgctatgtagaatatgatttcacc
gcgtcgctcgaggagaaactcgaccagatttcggcaggcgaactcaattggaaggacgtg
ctgcgcgacttctggaaggacttcttctcccagatcgaggacaccaaggaactgcgcgtc
accaacgtgctcgatgcgctcaacgaggaactggctccgctcgtcttcccgaagcgggaa
gatggcggcgacccgcgcatttgtcaggtctgcggcaccggcaagctgtccctgaagctc
ggcaaatacggcgctttcgtcggatgctccaattacccggaatgcaactacacgcgccaa
ctctcctccgacagcaacggtgacgccgaagcagctgcagcgaacgagccgcaaagcctc
ggcaaggatccgcataccggcgaggaaatcacgctgcgcaacggccgcttcggcccctat
gtccagcgcggcgacggcaaggaggcgaaacgcgccagcctgccgaagggttggacgccg
gcggcgatcgatcacgagaaggccctcgccctgctctccctgccgcgcgatatcgggccg
catccggaaagcggcaagatgatctccaccggcatcggccgctatggccccttcgtgctt
cacaacggcacctatgccaatctggaatccgtcgaggacgtcttctctatcggtctgaac
cgcgcgatttccgtccttgccgacaagcagtccaaaggggctggcggcggacgcgctagc
gcggcggccctcaaggagcttggggaacatccggacggcggcgcgattactgttcgcgac
ggacgcttcgggccctacgtcaactggggcaaggtgaatgccacgctgccgaggggtaag
gacccgcaatcggtcacggtcgaggaagcgcttgcgctcatcgccgagcgcgaagcgaaa
ggcggcgtgaccaagggcaaggcggcaaagggaaagccgaccgggggaaaatcggccgga
acgaagtctgccaaggctgcatcggccggaactgcgaaagcggagaagccgaaatcagca
gcgaagacgaaaacgaaagcggccgcgaaggccaagaaggactga
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