Sinorhizobium meliloti RMO17: DU99_07960
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Entry
DU99_07960 CDS
T03395
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
smer
Sinorhizobium meliloti RMO17
Pathway
smer03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DU99_07960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smer03400
]
DU99_07960
Enzymes [BR:
smer01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DU99_07960
DNA repair and recombination proteins [BR:
smer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DU99_07960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AIL99344
LinkDB
All DBs
Position
complement(1627189..1627980)
Genome browser
AA seq
263 aa
AA seq
DB search
MKIATWNINGVKARLDGLVGWLRESNPDIACLQEIKSVDETFPRGEIEALGYHVETHGQK
GFNGVALLSKVRPDEINRGLPGDPADEQSRFIEGVFSVNGGAFRVCCLYLPNGNPVETEK
YPYKLAWMRRLAAFAEQRLVLEEPLILAGDYNVIPEAHDCWDVKVWRNDALYLPETRAAF
RRLRNLGFTDAVRATSDEAPLYSFWDYQAGCWQKNFGIRIDHLMLSPEAADKLVSTSIEK
HVRAWEKPSDHVPVTAEFAFETA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgccacatggaacatcaatggcgtcaaagcgcgtctcgacggcctcgttggc
tggctcagggaatcgaaccccgacatcgcctgtctgcaggagatcaaatccgtcgacgaa
acatttccgagaggcgagatcgaggcgctcggctaccatgtggagacgcatggacagaaa
ggcttcaatggcgtcgccctgctctccaaggtgagaccggacgagatcaatcgcggattg
ccgggagaccccgccgacgaacagtcgcgcttcatcgaaggcgtgttctccgtcaatggc
ggagcctttcgggtctgctgcctctatctgcccaacggaaatccggtagagacggaaaaa
tacccctacaagctcgcatggatgcggcgcctggccgcctttgcggaacagaggctcgtc
ctcgaggaaccgctcatcctggccggcgactacaacgtcattccggaggcgcacgactgc
tgggacgtaaaggtctggcggaacgacgctctctacctgccggagacacgtgccgccttt
cggcggctgcgcaaccttggcttcaccgacgcggtgcgcgcgacctccgacgaggcgccg
ctctattcattctgggattatcaggccggctgctggcagaagaatttcggcatccgcatc
gatcacctgatgctgtcgccggaggcggcagacaagctcgtgtcgacctctatcgaaaag
cacgtccgggcctgggaaaagccgtccgaccatgtgcccgtaacggctgaattcgcgttc
gagacggcctga
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