Sinorhizobium meliloti RMO17: DU99_18190
Help
Entry
DU99_18190 CDS
T03395
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
smer
Sinorhizobium meliloti RMO17
Pathway
smer03420
Nucleotide excision repair
smer03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DU99_18190
03430 Mismatch repair
DU99_18190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smer03400
]
DU99_18190
Enzymes [BR:
smer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DU99_18190
DNA repair and recombination proteins [BR:
smer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DU99_18190
MMR (mismatch excision repair)
Other MMR factors
DU99_18190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
HHH
HHH_5
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AIM01258
LinkDB
All DBs
Position
pSymA:complement(43846..45915)
Genome browser
AA seq
689 aa
AA seq
DB search
MATAAHLEKLNERQRCAVEYGVGTGEGAQAGPLLIIAGAGSGKTNTLAHRVAHLIVNGAD
PRRILLMTFSRRAAAEMSRRVERICAQVLGPSSGTMTDALSWAGTFHGIGARLLRIYAEQ
IGLNAEFTIHDREDSADLINLMRHELGFSKMESRFPTKGTCLAIYSRAVNAELPLSEVLR
TWYPWVSGWEQQLNELFAGYVEAKQAQNVLDYDDLLLYWAQMVSDPSLADDIGNRFDYVL
VDEYQDTNKLQSSVLLALKPGGRGLTVVGDDAQSIYSFRAATVRNILDFPKQFSPPAEIV
TLDRNYRSTQPILAAANGVIDLARERFTKNLWTDRESAERPKLLTVKDEADQANCIVEQV
LANRESGMLLKQQAVLFRTSSHSGPLEVELTRRNIPFVKFGGLKFLDSAHVKDMLAVLRF
AQNPRDRVAGFRLLQMLPGIGPQTAGKILDTVAADPEPLMALGEVPAPPRSGADWLSLVE
LLQALRKPGSAWPTEIEMARMWYEPHLERIHEDAETRRADLVQLEQIAAGYPSRERFLTE
LTLDPPDATSDQAGVPLLDEDYLILSTIHSAKGQEWRSVFMLNVVDGCIPSDLATGTSHE
LEEERRLLYVGMTRAKDQLTLMVPQRFFTGGQHAQGDRHVYASRTRFIPATLLQFFESAT
WPVVSPNASERSAKQIRIDVAARMRTMWR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggcccatctggagaaactgaacgagagacagcgctgcgcagtcgaatat
ggcgtcggaacaggagaaggggcccaggcaggcccgctgttgatcatcgcgggcgcgggc
tccgggaagaccaacaccttggctcatcgcgttgctcacctgatcgtcaacggggccgat
ccgcgccgcattctcctgatgaccttctcgcgcagggccgcggccgagatgtcgcgccgc
gtcgagcgtatctgcgcacaggtgctcggtcccagttccggaacgatgaccgacgctctt
tcatgggcgggtacttttcacggtatcggggcacggctgcttagaatctatgccgaacag
atcgggctgaatgcggagttcaccattcacgaccgcgaggacagcgccgacctgatcaac
ctcatgcgccacgagctcggcttctcgaagatggaaagccggtttccgaccaagggcacc
tgtctggcgatctattcgcgggcagtgaacgcggaattgccgctgagcgaagtgctccgc
acctggtacccgtgggtatcgggctgggaacagcagttgaatgagctgtttgccggctac
gtcgaggccaagcaggcgcagaacgtcctcgactacgacgacctgcttctctattgggcg
cagatggtcagcgatccctccctggccgacgatatcggcaaccggttcgactatgtcctc
gtcgacgaatatcaggataccaacaagctccagtcttcggtgctgctggccctgaagccc
ggcgggcgcggcctgacggtcgtcggcgacgacgcgcagtcgatctactcgttccgagcg
gcgacggtccgcaacattctcgactttccgaagcaattttcgccgcccgccgagatcgtc
acgctcgaccgcaactaccgttcgacccagccgatcctcgcggccgccaacggggttatc
gacctggcgcgggaacgcttcaccaagaacctctggacggaccgcgagtcggctgaacgt
cctaagctgctgacagttaaggacgaggccgatcaggcgaactgcatcgtcgagcaggtg
cttgccaatcgtgaatccgggatgctcctgaaacagcaagccgtcctgttccgcacctcg
agccacagcggccccctcgaggtggaactgacccgccgcaacatccccttcgtaaagttc
ggaggcctgaagttcctcgacagcgcccacgttaaggacatgctggccgtgctgcgcttt
gcacaaaacccacgtgaccgcgtcgcgggcttccggctcctgcagatgctgccgggcatc
ggcccacagaccgcgggcaagatcctggacacggtcgcagccgatcccgagccgttgatg
gcgcttggcgaagtcccagctccgccgaggagcggcgcggactggctgtccttggtcgag
ctgctgcaggccctgcgcaaacccggttccgcatggccgacggaaatagagatggcgcgg
atgtggtacgaaccgcatctcgagcgaatacacgaggatgccgaaacgcgccgggccgac
ctcgtgcaactcgagcagatcgccgccggctatccgagccgcgagcgcttcctcacggag
ttgacgctcgatccgccggacgcgacgagcgaccaggctggcgtacctttactcgacgaa
gactatcttatcctgtcgaccatccattcggccaaggggcaggaatggcgctccgttttc
atgctcaacgtcgtcgacggttgcattccgtcagacctggctacaggcaccagccacgaa
ctggaggaggagcggcgacttctctatgtcggtatgacacgcgccaaggaccaactgacg
ctgatggtgccgcaacgcttcttcaccggcggtcagcacgcgcagggtgaccgccatgtt
tacgcaagccgcacacgctttatccccgcgacattgcttcagttcttcgagagtgcaacc
tggcccgtcgtcagccccaatgcctccgagcgtagcgcaaagcagatccgcatcgatgtc
gcagcccggatgcgcaccatgtggcggtag
DBGET
integrated database retrieval system
