Sinorhizobium meliloti RMO17: DU99_23525
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Entry
DU99_23525 CDS
T03395
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
smer
Sinorhizobium meliloti RMO17
Pathway
smer00250
Alanine, aspartate and glutamate metabolism
smer00310
Lysine degradation
smer00350
Tyrosine metabolism
smer00650
Butanoate metabolism
smer00760
Nicotinate and nicotinamide metabolism
smer01100
Metabolic pathways
smer01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
smer00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
DU99_23525 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DU99_23525 (gabD)
00310 Lysine degradation
DU99_23525 (gabD)
00350 Tyrosine metabolism
DU99_23525 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
DU99_23525 (gabD)
Enzymes [BR:
smer01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
DU99_23525 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
DU99_23525 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
DU99_23525 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
AIM02200
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Position
pSymA:complement(1078742..1080214)
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AA seq
490 aa
AA seq
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MTISETLLVKLKDPSLAVDKGLIGAEWLDRSDSGKTFDVSNPATGEVIAIVPDMSRSETA
RAIDAAHAAQRAWAEKTGKERAAVLRNLYDLVVANADDLATILTMEMGKPLTEAKGEILY
GASYVEWFGEEAKRVYGDTIPGHQPDKRIIVLKQPIGVVAAITPWNFPNAMLARKLAPAA
AAGCAVVSKPAAETPLSALALALLAERAGLPAGVFNVILSTDSAEVGKEMCANDKVRKLT
FTGSTNVGKILMRQGADQIMKLGLELGGNAPFIVFDDADLDAAVEGAMVAKYRNNGQTCV
CANRLFVQAGIYDAFAARLTAKVSEMTIGDGFEPDVDAGPLISEKALAKVEEHIRDAVTK
GADLVLGGNARGGLFFEPTVLTGATMDMKIAGEETFGPVAPLFKFETENEVVNMANKTEF
GLASYFYSKDVSRVFRVAEALEYGIVGINTGLISTEVAPFGGVKQSGQGREGSKYGIDDY
VETKYLCLSI
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacgatttcggaaacacttctcgtcaaactgaaggatcccagcctcgctgtcgacaag
ggtttgatcggcgccgaatggcttgacagaagcgacagcggcaagacgttcgatgtcagc
aatccggcgaccggcgaggtcatcgccatcgtgcccgacatgagtcggtccgaaaccgca
cgtgcgatcgatgcggcccacgcggcgcaaagggcatgggcggagaagacgggcaaggaa
cgcgccgcggtgctgcgcaacctctacgacctcgtggttgccaatgccgacgacctcgcc
accatcctgacgatggaaatgggtaagccgcttacggaggcgaagggcgagattctctac
ggcgcgtcttacgtcgagtggtttggcgaggaggcgaagcgcgtctacggcgacacgatt
ccgggccaccagccggacaagcgcatcatcgtcctcaaacagccgatcggggtcgtggcg
gcgatcacgccgtggaattttccaaatgcgatgctcgcccgaaaactggcgcctgccgct
gccgcaggctgcgcagtggtttcgaagcctgccgcggagacgccgctgtcggcgctggcg
ctagccttgctcgcagaacgcgccggcctgcctgccggagtcttcaacgttatcctgtcg
accgattccgcggaagttggcaaggaaatgtgtgccaatgacaaggttcgcaagctgacc
ttcaccggctccaccaacgtcggcaaaatattgatgcgccagggcgccgaccagatcatg
aagctgggtctggaactcggaggcaacgcgccgttcatcgtctttgacgacgccgatctc
gacgccgctgtcgaaggcgccatggtcgccaagtaccgcaacaacgggcagacctgcgtc
tgcgccaataggcttttcgtgcaggccggaatttacgacgcctttgccgcgaggctgact
gccaaggttagcgagatgacgatcggcgacgggtttgagccggacgtcgacgctggcccg
ctgatctcggaaaaggctctcgccaaggtcgaggaacatatccgggacgcggtgacgaag
ggtgccgatctggttctgggcggcaatgcgcggggcggtttgtttttcgagccgaccgtc
ctgaccggagccaccatggacatgaagattgctggcgaggagacgttcggccccgtcgcg
ccgctcttcaagttcgagaccgagaatgaagttgtcaatatggccaacaagaccgagttc
ggcttagcatcctatttttactccaaggatgtgagtagggtattccgcgtggcggaagcg
ctagaatacggcatagtgggcatcaatacaggcctgatctctacggaagtagctcccttc
ggcggtgtcaagcagtcggggcaaggccgcgaaggctccaaatacggcatcgatgactat
gtggaaaccaagtatctttgcctcagtatttga
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