KEGG   PATHWAY: smes03010
Entry
smes03010                   Pathway                                
Name
Ribosome - Shewanella mesophila
Class
Genetic Information Processing; Translation
Pathway map
smes03010  Ribosome
smes03010

Other DBs
PDB: 1FFK 1J5E 4V4A 4YBB 4V6U 4V6X 4UG0 4V88 3A1Y
Organism
Shewanella mesophila [GN:smes]
Gene
K0I73_00605  [KO:K01977]
K0I73_00620  [KO:K01980]
K0I73_00625  rrf; 5S ribosomal RNA [KO:K01985]
K0I73_00635  rrf; 5S ribosomal RNA [KO:K01985]
K0I73_00690  rplK; 50S ribosomal protein L11 [KO:K02867]
K0I73_00695  rplA; 50S ribosomal protein L1 [KO:K02863]
K0I73_00700  rplJ; 50S ribosomal protein L10 [KO:K02864]
K0I73_00705  rplL; 50S ribosomal protein L7/L12 [KO:K02935]
K0I73_00720  rpsL; 30S ribosomal protein S12 [KO:K02950]
K0I73_00725  rpsG; 30S ribosomal protein S7 [KO:K02992]
K0I73_00740  rpsJ; 30S ribosomal protein S10 [KO:K02946]
K0I73_00745  rplC; 50S ribosomal protein L3 [KO:K02906]
K0I73_00750  rplD; 50S ribosomal protein L4 [KO:K02926]
K0I73_00755  rplW; 50S ribosomal protein L23 [KO:K02892]
K0I73_00760  rplB; 50S ribosomal protein L2 [KO:K02886]
K0I73_00765  rpsS; 30S ribosomal protein S19 [KO:K02965]
K0I73_00770  rplV; 50S ribosomal protein L22 [KO:K02890]
K0I73_00775  rpsC; 30S ribosomal protein S3 [KO:K02982]
K0I73_00780  rplP; 50S ribosomal protein L16 [KO:K02878]
K0I73_00785  rpmC; 50S ribosomal protein L29 [KO:K02904]
K0I73_00790  rpsQ; 30S ribosomal protein S17 [KO:K02961]
K0I73_00795  rplN; 50S ribosomal protein L14 [KO:K02874]
K0I73_00800  rplX; 50S ribosomal protein L24 [KO:K02895]
K0I73_00805  rplE; 50S ribosomal protein L5 [KO:K02931]
K0I73_00810  rpsN; 30S ribosomal protein S14 [KO:K02954]
K0I73_00815  rpsH; 30S ribosomal protein S8 [KO:K02994]
K0I73_00820  rplF; 50S ribosomal protein L6 [KO:K02933]
K0I73_00825  rplR; 50S ribosomal protein L18 [KO:K02881]
K0I73_00830  rpsE; 30S ribosomal protein S5 [KO:K02988]
K0I73_00835  rpmD; 50S ribosomal protein L30 [KO:K02907]
K0I73_00840  rplO; 50S ribosomal protein L15 [KO:K02876]
K0I73_00850  rpmJ; 50S ribosomal protein L36 [KO:K02919]
K0I73_00855  rpsM; 30S ribosomal protein S13 [KO:K02952]
K0I73_00860  rpsK; 30S ribosomal protein S11 [KO:K02948]
K0I73_00865  rpsD; 30S ribosomal protein S4 [KO:K02986]
K0I73_00875  rplQ; 50S ribosomal protein L17 [KO:K02879]
K0I73_00945  [KO:K01977]
K0I73_00950  [KO:K01980]
K0I73_00955  rrf; 5S ribosomal RNA [KO:K01985]
K0I73_01685  rpmE; 50S ribosomal protein L31 [KO:K02909]
K0I73_02855  rplM; 50S ribosomal protein L13 [KO:K02871]
K0I73_02860  rpsI; 30S ribosomal protein S9 [KO:K02996]
K0I73_02915  rpsF; 30S ribosomal protein S6 [KO:K02990]
K0I73_02925  rpsR; 30S ribosomal protein S18 [KO:K02963]
K0I73_02930  rplI; 50S ribosomal protein L9 [KO:K02939]
K0I73_04685  [KO:K01977]
K0I73_04690  [KO:K01980]
K0I73_04695  rrf; 5S ribosomal RNA [KO:K01985]
K0I73_05325  rpsO; 30S ribosomal protein S15 [KO:K02956]
K0I73_06180  rpsB; 30S ribosomal protein S2 [KO:K02967]
K0I73_07540  [KO:K01977]
K0I73_07555  [KO:K01980]
K0I73_07560  rrf; 5S ribosomal RNA [KO:K01985]
K0I73_08555  rplY; 50S ribosomal protein L25 [KO:K02897]
K0I73_09075  rpmI; 50S ribosomal protein L35 [KO:K02916]
K0I73_09080  rplT; 50S ribosomal protein L20 [KO:K02887]
K0I73_09215  rpsA; 30S ribosomal protein S1 [KO:K02945]
K0I73_11195  rpmF; 50S ribosomal protein L32 [KO:K02911]
K0I73_13775  rpsT; 30S ribosomal protein S20 [KO:K02968]
K0I73_13915  rplS; 50S ribosomal protein L19 [KO:K02884]
K0I73_13930  rpsP; 30S ribosomal protein S16 [KO:K02959]
K0I73_14250  rpsU; 30S ribosomal protein S21 [KO:K02970]
K0I73_14785  rpmA; 50S ribosomal protein L27 [KO:K02899]
K0I73_14790  rplU; 50S ribosomal protein L21 [KO:K02888]
K0I73_16735  rrf; 5S ribosomal RNA [KO:K01985]
K0I73_16740  [KO:K01980]
K0I73_16745  [KO:K01977]
K0I73_16755  rrf; 5S ribosomal RNA [KO:K01985]
K0I73_16760  [KO:K01980]
K0I73_16775  [KO:K01977]
K0I73_16950  rpmG; 50S ribosomal protein L33 [KO:K02913]
K0I73_16955  rpmB; 50S ribosomal protein L28 [KO:K02902]
K0I73_18455  rrf; 5S ribosomal RNA [KO:K01985]
K0I73_18460  [KO:K01980]
K0I73_18465  [KO:K01977]
K0I73_18835  rrf; 5S ribosomal RNA [KO:K01985]
K0I73_18840  [KO:K01980]
K0I73_18845  [KO:K01977]
K0I73_19050  rpmH; 50S ribosomal protein L34 [KO:K02914]
Reference
  Authors
Ban N, Nissen P, Hansen J, Capel M, Moore PB, Steitz TA.
  Title
Placement of protein and RNA structures into a 5 A-resolution map of the 50S ribosomal subunit.
  Journal
Nature 400:841-847 (1999)
DOI:10.1038/23641
Reference
  Authors
Clemons WM Jr, May JL, Wimberly BT, McCutcheon JP, Capel MS, Ramakrishnan V.
  Title
Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.
  Journal
Nature 400:833-840 (1999)
DOI:10.1038/23631
Reference
  Authors
Cate JH, Yusupov MM, Yusupova GZ, Earnest TN, Noller HF.
  Title
X-ray crystal structures of 70S ribosome functional complexes.
  Journal
Science 285:2095-2104 (1999)
DOI:10.1126/science.285.5436.2095
Reference
  Authors
Ban N, Nissen P, Hansen J, Moore PB, Steitz TA.
  Title
The complete atomic structure of the large ribosomal subunit at 2.4 A resolution.
  Journal
Science 289:905-920 (2000)
DOI:10.1126/science.289.5481.905
Reference
  Authors
Nissen P, Hansen J, Ban N, Moore PB, Steitz TA.
  Title
The structural basis of ribosome activity in peptide bond synthesis.
  Journal
Science 289:920-930 (2000)
DOI:10.1126/science.289.5481.920
Reference
  Authors
Wimberly BT, Brodersen DE, Clemons WM Jr, Morgan-Warren RJ, Carter AP, Vonrhein C, Hartsch T, Ramakrishnan V.
  Title
Structure of the 30S ribosomal subunit.
  Journal
Nature 407:327-339 (2000)
DOI:10.1038/35030006
Reference
  Authors
Carter AP, Clemons WM, Brodersen DE, Morgan-Warren RJ, Wimberly BT, Ramakrishnan V.
  Title
Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.
  Journal
Nature 407:340-348 (2000)
DOI:10.1038/35030019
Reference
  Authors
Noeske J, Wasserman MR, Terry DS, Altman RB, Blanchard SC, Cate JH
  Title
High-resolution structure of the Escherichia coli ribosome.
  Journal
Nat Struct Mol Biol 22:336-41 (2015)
DOI:10.1038/nsmb.2994
Reference
  Authors
Armache JP, Anger AM, Marquez V, Franckenberg S, Frohlich T, Villa E, Berninghausen O, Thomm M, Arnold GJ, Beckmann R, Wilson DN
  Title
Promiscuous behaviour of archaeal ribosomal proteins: implications for eukaryotic ribosome evolution.
  Journal
Nucleic Acids Res 41:1284-93 (2013)
DOI:10.1093/nar/gks1259
Reference
  Authors
Anger AM, Armache JP, Berninghausen O, Habeck M, Subklewe M, Wilson DN, Beckmann R
  Title
Structures of the human and Drosophila 80S ribosome.
  Journal
Nature 497:80-5 (2013)
DOI:10.1038/nature12104
Reference
  Authors
Khatter H, Myasnikov AG, Natchiar SK, Klaholz BP
  Title
Structure of the human 80S ribosome.
  Journal
Nature 520:640-5 (2015)
DOI:10.1038/nature14427
Reference
  Authors
Naganuma T, Nomura N, Yao M, Mochizuki M, Uchiumi T, Tanaka I
  Title
Structural basis for translation factor recruitment to the eukaryotic/archaeal ribosomes.
  Journal
J Biol Chem 285:4747-56 (2010)
DOI:10.1074/jbc.M109.068098
KO pathway
ko03010   

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