Shewanella mesophila: K0I73_00085
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Entry
K0I73_00085 CDS
T09171
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
smes
Shewanella mesophila
Pathway
smes00071
Fatty acid degradation
smes00280
Valine, leucine and isoleucine degradation
smes00310
Lysine degradation
smes00362
Benzoate degradation
smes00380
Tryptophan metabolism
smes00410
beta-Alanine metabolism
smes00640
Propanoate metabolism
smes00650
Butanoate metabolism
smes00907
Pinene, camphor and geraniol degradation
smes00930
Caprolactam degradation
smes01100
Metabolic pathways
smes01110
Biosynthesis of secondary metabolites
smes01120
Microbial metabolism in diverse environments
smes01200
Carbon metabolism
smes01212
Fatty acid metabolism
Module
smes_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
K0I73_00085 (fadB)
00650 Butanoate metabolism
K0I73_00085 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
K0I73_00085 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
K0I73_00085 (fadB)
00310 Lysine degradation
K0I73_00085 (fadB)
00380 Tryptophan metabolism
K0I73_00085 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
K0I73_00085 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
K0I73_00085 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
K0I73_00085 (fadB)
00930 Caprolactam degradation
K0I73_00085 (fadB)
Enzymes [BR:
smes01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
K0I73_00085 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
K0I73_00085 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
K0I73_00085 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
K0I73_00085 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
DUF3048
PDH_N
Motif
Other DBs
NCBI-ProteinID:
QYJ86223
LinkDB
All DBs
Position
complement(19443..21593)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIARLCFNAAGSVNKFDRETLDSLNTALDSLTQVDNIKGLVLTSG
KDAFIVGADITEFLGLFAQDDAVLLKWLEEANSVFNKLEDLPFPTISAIKGFALGGGCET
ILATDMRVADTTARIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRPDSALK
VGAIDAIVAPEALETAAIQMLKDAIAEEIDWQARRQRKLSPLTLPKLEAMMSFATAKGMV
FQVAGKHYPAPMAAIDVIEKAAGAERTEALQVEHQAFLKLAKTEVAQALIGIFLNDQLVK
GKAKKASKQAHPTKSAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALELGLSEASKLL
TAQIKRGRSTPEKMAAVLNNITATLDYSAIKQADVVVEAVVEHPKVKATVLAEVEQHVSE
DAIIASNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEVIRGENSSEETIASVVAY
AAKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLADGADFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKTGKDAIDVMFEAQRFGQKNAKGFYQYSVDRRGKP
KKDIDAMSYELLGAAFGELKEFSKEDIIARTMIPMIIETVRCLEEGIIATPAEADMGLVY
GLGFPPFRGGVFRYIDTMGVANFVALADKYAHLGGLYQVTDKMRELAANNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacaattcaggttgaattacttgaagacaatatcgctcggctc
tgtttcaatgccgcgggctcagtcaataaatttgacagagaaaccctcgactctctcaac
accgcattagacagcctaacgcaagtagataatattaaaggtctagtgcttacttcaggc
aaagacgcttttattgttggtgcagacatcaccgaatttttaggcttattcgcccaagat
gatgccgtacttctaaaatggttagaagaagccaatagcgtatttaataaattggaagat
cttcccttcccaaccatctctgctatcaaaggttttgccttaggcggtggttgcgaaacg
attttagcaacagatatgcgcgtagcggatacgaccgcacgcattggcctaccagaaacc
aaactagggatcattccaggctttggtggtacggtacgactacctcgcgtcattggcgcc
gataacgcactcgagtggatcaccacagggaaagaccagcgcccagattcagcattaaaa
gtcggtgctatcgatgctattgttgcacctgaggcgctagaaaccgcagcgattcaaatg
ctaaaagatgcgattgcagaagagattgattggcaagcgcgccgtcaacgtaaactgtcg
ccattaaccctacctaaacttgaagctatgatgtcatttgcaacggcaaagggcatggta
ttccaagttgctggcaaacactatccagccccaatggctgcaattgatgtgatcgaaaag
gctgctggcgccgaacgaacagaagccttacaagttgagcatcaagccttcttaaagctg
gctaagacagaagtagcccaagcgcttatcggtatcttccttaacgatcagctagtaaaa
ggcaaagcgaaaaaagcttcaaaacaagctcatccaacgaagtctgccgccgtattagga
gcagggattatgggtggcggtatcgcatatcaaagtgccagcaaaggcactcctatcgta
atgaaagatattgcccagccagcccttgagcttggcttaagcgaagcatctaaattgctg
actgcgcagatcaagcgtggccgctctaccccagaaaaaatggcggcggtactcaataac
atcactgccaccttagattacagtgctattaagcaagctgacgttgttgtcgaagcggtt
gtcgaacatccaaaagtgaaagcaacggtgttggctgaagtagagcaacacgttagcgaa
gatgccatcatcgcctctaacacatcaaccatctcaatcaacttactggcgaagagcctg
aagaaaccggaacgtttctgcggtatgcatttttttaaccctgtgcataagatgccatta
gttgaagtgatccgcggcgagaacagctctgaagaaaccatcgcatcggttgtcgcctat
gcagctaagatgggtaaaacgcctattgtggtaaatgattgcccaggtttcttcgttaac
cgcgtattgttcccctactttgctggctttagtggcctacttgccgatggtgctgatttt
gcagctatcgataaggtaatggaaaagcagtttggctggcctatgggtcctgcttacctg
cttgatgtggttggtctagataccggtcatcatgcacaagctgtgatggctgaaggtttc
ccagacagaatgggcaaaaccggaaaagacgcaattgatgtgatgtttgaggcgcagcgt
tttggtcagaagaatgctaaaggtttctaccaatactcagtcgatcgtcgcggtaagccg
aagaaagatattgatgccatgagctatgaattgctgggcgcagcctttggtgagctaaaa
gagttcagcaaagaggacatcatcgctcgcactatgatcccaatgatcatcgaaacggta
cgttgtcttgaagaaggaattattgccacgccagctgaagccgatatgggactggtttat
ggtcttggattccctccatttagagggggggtgttccgttacatagacaccatgggcgta
gccaactttgtcgcacttgcagacaaatatgcgcatctaggtggtctataccaagtaaca
gacaagatgcgtgaacttgcagccaacaacggtagttactaccaagcctaa
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