Shewanella mesophila: K0I73_01500
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Entry
K0I73_01500 CDS
T09171
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
smes
Shewanella mesophila
Pathway
smes00300
Lysine biosynthesis
smes00470
D-Amino acid metabolism
smes01100
Metabolic pathways
smes01110
Biosynthesis of secondary metabolites
smes01120
Microbial metabolism in diverse environments
smes01230
Biosynthesis of amino acids
Module
smes_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K0I73_01500 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K0I73_01500 (lysA)
Enzymes [BR:
smes01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
K0I73_01500 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
QYJ86462
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Position
328947..330191
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AA seq
414 aa
AA seq
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MDYFLYKNNELYAEQCPVAELAHRYDTPLYIYSRATLERHWHAFDQAVANHPHLICYAVK
ANSNLAVLNVLARLGSGFDIVSGGELARVIEAGGDPNKVVFSGVGKTVAEMEMALKLGIY
CFNVESAAELEQLNLVALRLGKIAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMEDAER
IFVRAHQLPGLEVKGADCHIGSQLTEIQPFLDAMERMLGLIDRLAEQGVIISHLDVGGGL
GVTYDDEQPPEPSDYAAALLDKIQGRDLKLIFEPGRAIAANAGIFVTQVLYLKENSDKNF
ALVDGAMNDLIRPSLYSAWQNIIPVKPREGVALNYDIVGPVCETGDFLGKDRMLNLQADD
LLAVRSSGAYGFTMSSNYNSRPRVAEVMVDGDKHYLVREREKVSQLWQGEQLLP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
gtggattactttctctataaaaacaatgagctttatgctgaacagtgtcccgttgctgaa
ctggcccatcgctatgatacgccactgtatatttattctcgcgctacgttagagcgtcat
tggcatgcattcgatcaagcggtggctaatcatccacatcttatttgttacgcagttaaa
gctaactcaaacttagcggttttaaatgtattagcgcgtcttggaagtggtttcgatatc
gtgtctggcggagagttagccagagtgattgaagccggtggcgatccaaataaggtcgtc
ttctctggggtgggtaaaaccgtcgcagagatggaaatggcacttaagcttggtatctac
tgctttaatgttgagtctgctgcagagttagaacagcttaatcttgttgcattgcgactg
ggtaagattgcgcccgtttcactgcgtgttaaccccgatgtcgatgctggcactcatccc
tatatttcaacagggttaaaagagaacaagtttggtatcgcgatggaagatgccgagcgg
atctttgtgcgtgcgcatcaattaccaggacttgaggtcaaaggcgcagattgtcatatc
ggctctcagttgactgaaattcaaccttttcttgatgcaatggaaaggatgttaggactt
atcgatcgccttgctgagcaaggggttatcatttctcatctcgatgtaggcggaggttta
ggggtgacttatgatgatgagcagccgccagagcctagcgattacgccgccgctctgctt
gataagatacaaggtcgagatctcaagcttatcttcgaacctggacgcgctattgcggcc
aatgctggcattttcgttactcaagtactttatttaaaagaaaatagcgacaaaaacttt
gccttagttgatggtgcgatgaatgatttaataaggccttcactctatagcgcttggcaa
aatatcattccggtaaagccaagagaaggtgtcgctctcaactatgatattgtcggccct
gtgtgcgagaccggtgattttctcggtaaagatcgcatgttgaatctgcaagccgatgat
ctgcttgccgtgcgttcatcaggggcttatggttttaccatgtcatcgaactataactct
cgcccacgtgtagctgaggtcatggttgatggcgataagcattatttggtgagagagcga
gaaaaagtatcgcaactgtggcaaggtgaacaactgctcccgtaa
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