Shewanella mesophila: K0I73_02160
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Entry
K0I73_02160 CDS
T09171
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
smes
Shewanella mesophila
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
smes02044
]
K0I73_02160
02035 Bacterial motility proteins [BR:
smes02035
]
K0I73_02160
Secretion system [BR:
smes02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
K0I73_02160
Bacterial motility proteins [BR:
smes02035
]
Pilus system
Pilus assembly proteins
K0I73_02160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
PASTA
FlgD_ig
Motif
Other DBs
NCBI-ProteinID:
QYJ86583
LinkDB
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Position
complement(474401..475678)
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AA seq
425 aa
AA seq
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MATASLAKSKAQIKSKKQKAAKAQPKVVTFEWKGTNRDGNKTSGELRGTSVNEVKAQLKS
QGVNPKVVRKKPESLFKSNPKITAMDIAMMTRQIATMLAAGVPIVTTLEMLGRGHEKPRM
RELLATIVSDVQSGIPLSDSLKPHRQYFDDLYVDLVGAGEHSGSLDAVFDRIATYREKAE
ALKSKIKKAMFYPAAVVIVAVGVTALLLLFVVPQFEEIFNGFGAELPAFTQLIIGLSRWL
QTSWYFFVIGIVVAFFSFKRAHLTSQGFRNQIDQLVLKIPAIGPILHKAAMARFARTLAT
TFAAGVPLIDGLESAAGASGNYVYKSALIKVRQEVMSGMQMNVAMRTTGIFPDMLIQMVM
IGEESGGLDEMLNKVANIYEMQVDDAVDGLSSLIEPIMMVVIGTLVGGLIVGMYLPIFQL
GKVVG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgcatcgcttgctaagagtaaagctcaaataaaaagtaaaaagcaaaaagcg
gcaaaggcgcaacctaaagtcgttaccttcgagtggaaaggcaccaaccgcgatggcaat
aaaacttccggagaactccgcggaacatctgttaacgaggtaaaggcgcagctaaaatcc
caaggggtaaatcccaaagtcgtcaggaaaaagcctgaatccctgtttaagagcaacccc
aaaatcaccgccatggatatagccatgatgacccggcaaatagcgaccatgttggcggcg
ggcgttcctattgtcaccaccttggagatgctcggtcgcggtcatgaaaaacccagaatg
cgtgaactgttggcaacaattgttagcgatgtacaatcaggtattccactatcggattcc
ttgaagccacacagacaatatttcgacgatctctatgtagatctagtaggggcaggtgaa
cactctggttcactcgatgcggtattcgatcgcatcgctacctatcgcgagaaagccgaa
gcactcaagtccaaaattaaaaaggccatgttctatcctgccgcagttgttatagttgct
gtgggcgtaacagctctcctactcctgtttgtcgtacctcaatttgaagaaatttttaat
ggttttggcgcagagctacccgcatttacccagttgattatcgggttgtcacgttggcta
caaacctcatggtacttctttgttattggcatcgtcgtagcgtttttttcattcaaaagg
gctcatttaacatcgcagggatttcgaaatcagattgatcaactagtactaaaaatccca
gcaattggccccatcctccataaagcggcaatggcgcgttttgccagaaccttagccacc
acctttgcggcaggtgtacccctgattgacggattagaatccgccgctggcgcgtccggt
aattatgtatacaaaagcgctttgataaaggtcagacaagaagtgatgtcaggcatgcag
atgaatgtcgccatgcgaacaaccggaattttccccgatatgctgattcagatggtgatg
attggggaagaatctggcggcctcgatgagatgctcaacaaagtggctaacatctatgag
atgcaggtagacgatgccgtcgatggcttatcgagtctcatcgaaccgattatgatggtg
gtgatcggcaccttagtcggcggcctgattgttggtatgtatctgccaatcttccaacta
ggtaaagtagtaggctaa
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