Shewanella mesophila: K0I73_03920
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Entry
K0I73_03920 CDS
T09171
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
smes
Shewanella mesophila
Pathway
smes03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K0I73_03920 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smes03400
]
K0I73_03920 (ung)
Enzymes [BR:
smes01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
K0I73_03920 (ung)
DNA repair and recombination proteins [BR:
smes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K0I73_03920 (ung)
Prokaryotic type
K0I73_03920 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QYJ86897
LinkDB
All DBs
Position
872554..873222
Genome browser
AA seq
222 aa
AA seq
DB search
MENIVNWRDFISQQSQLGYFHQLQDFVAAERASGKAIYPCDDEVFSAFNLTPLDKVRVVL
IGQDPYHGEGQAHGLCFSVKPGVKTPPSLVNMYKELATDIDGFETPDHGYLANWAKQGIL
MLNTVLTVEGGKAHSHAKAGWETFTDNALKLLDAQARPIIFVLWGGHAIKKAKLVTQAHH
QVISGPHPSPLSAYRGFFGCGHFSQINELLLQHGGSPIDWQV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggagaatatcgttaattggcgtgactttataagtcagcagtcacaacttggttatttt
catcagttgcaagactttgttgcggcagagcgtgctagcggaaaagcgatttatccctgt
gacgatgaggtgtttagcgcgttcaatctcactcctctggataaggtgcgtgtcgttctc
ataggccaagatccctatcacggtgaagggcaggctcatggcttatgtttttcggtgaaa
ccaggagtaaaaacaccgccttcactggttaatatgtacaaggagctggcgaccgatatt
gacggatttgagacgccagatcatggctatctggccaattgggctaagcaagggatcttg
atgttaaacactgtattaaccgtagaaggcgggaaggctcactcccacgccaaggcaggc
tgggaaacttttaccgacaatgcgttaaagttgttagatgcacaagctagaccgatcatt
tttgttttatggggcgggcatgcgattaaaaaagctaagttggtgactcaggcccatcat
caggtgatatcagggcctcatccgtcacctttatcggcttatcgtggcttttttgggtgt
ggtcacttctcgcaaattaatgaattgttattacaacacgggggctcgcctattgattgg
caagtatga
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