Shewanella mesophila: K0I73_05260
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Entry
K0I73_05260 CDS
T09171
Symbol
rlmE
Name
(GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
smes
Shewanella mesophila
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smes03009
]
K0I73_05260 (rlmE)
Enzymes [BR:
smes01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
K0I73_05260 (rlmE)
Ribosome biogenesis [BR:
smes03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K0I73_05260 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
QYJ87131
LinkDB
All DBs
Position
1169436..1170065
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AA seq
209 aa
AA seq
DB search
MSGKKRTASSSRWMQEHFDDHYVKLSQKRGLRSRAAFKIEEIQQKDKLIRPGMTVVDLGA
APGGWSQIAVKLAGDKGKVIACDILPMDPIVGVDFLQGDFREEKVLDALLERVGDAKVDV
VLSDMAPNMSGTGGVDQPRAMYLVELALDMCHQVLAPNGSFAVKVFQGEGFDEYMKAVKE
AFTTVKTRKPDSSRPRSREVYLVATGYKL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtaaaaaacgaacagctagttcctctcgctggatgcaggaacatttcgatgat
cactatgtaaagttatcgcaaaaacgagggttacgttcgcgtgccgcgtttaaaatcgaa
gagatacaacagaaagataaacttatccgtcccggcatgactgtcgtagatttaggggct
gcgcctggtggatggtcacagatcgcagtcaaattggctggagacaagggcaaggttatc
gcttgcgatattttacctatggatcccatcgttggtgtcgactttctgcaaggcgacttt
cgtgaagagaaagtgcttgatgccttacttgaaagagttggcgatgctaaagttgatgtt
gtactttctgatatggcgcctaatatgagtggtacaggtggtgtggatcaaccgcgcgcc
atgtatttggtagaactagcgttagatatgtgtcatcaagtgttggcacctaatggtagt
tttgctgttaaagtctttcagggggagggctttgacgaatatatgaaggcggtaaaagaa
gcatttactaccgttaaaacacgaaagccagactcttcgcgaccgcgttcgcgtgaagtc
tatcttgtggcgacaggatacaagttgtag
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integrated database retrieval system
