Shewanella mesophila: K0I73_06670
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Entry
K0I73_06670 CDS
T09171
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K02647
carbohydrate diacid regulator
Organism
smes
Shewanella mesophila
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smes03000
]
K0I73_06670
Transcription factors [BR:
smes03000
]
Prokaryotic type
Helix-turn-helix
Other families
K0I73_06670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
GAF_2
GAF
Motif
Other DBs
NCBI-ProteinID:
QYJ87384
LinkDB
All DBs
Position
complement(1511978..1513132)
Genome browser
AA seq
384 aa
AA seq
DB search
MYFLDSQIAQQIVDRTMAIIKHNINVMNNLGVILGSGDPHRIGSTHEGALLAISQNRTVT
INQASTSSLQGVKPGINLPLHYQGEVIGVVGITGDPEHLMAYGELLKMSAEMIVEQANSI
ELTQWQNRQQEEFILQLIKGEYNDIDQLKAWAKKLNIDLYMPRVAAVIQVQEDNPHTTAN
SLLKQVLNLLENPSRGNLVAMTSMTELVILKPAFLDGKQWNASLESERIDQLLKRIPAEM
NAQLKIALGHYFPAATDIHHSYQTAKETLRFGMQMQPKRSKYLFEDFSLLVMLSGLKQDW
RGQQLLTPFSKLIEQDNNQQLRKTLAAYLTHLGDQGACAKQLYIHRNTLRYRLDKISQIT
GVELNKIDGLLQLYLGQILLSDPN
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtgtactttttagactcacaaatcgcgcagcagattgtcgaccgcaccatggcgatcatc
aaacacaatattaatgtgatgaataacctcggggttattttgggctcaggcgatccccat
cgtatcggctcgacccatgagggtgccctacttgccatcagccaaaatcgcaccgttacc
ataaatcaagccagtacctcgagtcttcagggcgtcaagccagggattaatctgcccttg
cactatcaaggggaggttatcggtgttgtgggtattactggagatcctgaacatctgatg
gcctatggcgagctactgaagatgagcgccgagatgattgttgaacaggccaattcaatt
gagctaacgcaatggcagaaccgtcagcaagaggagtttattctgcaactcattaagggc
gaatataacgatattgatcagctcaaagcgtgggcaaagaaactcaacatcgacctttat
atgccccgcgtcgcggcggtgatccaagtacaggaggataacccccataccacggcaaac
tcactactaaaacaagtccttaacctgcttgaaaatccatctaggggtaacctagtcgcc
atgacatcgatgacagagctggtgatcctcaaacctgcgtttctggatggcaaacagtgg
aatgcgagtctcgaaagtgagcgtatcgaccagctgcttaaacggatccccgcggaaatg
aacgctcagttaaaaatcgccttgggacactactttcctgccgcgaccgatattcatcac
tcttaccaaactgcaaaagaaacccttagatttggcatgcagatgcaacccaaacgaagc
aaatacctgtttgaagatttctctttgctggtgatgttatcgggactcaaacaagattgg
cgcggtcagcaactgctcacgccgtttagcaagttaattgagcaagacaataaccagcag
ctacgaaaaactctggcggcgtatctgactcatttaggcgatcagggcgcttgtgcaaaa
cagctttatatccaccgcaatacccttcggtatcggctcgataagatcagccaaataaca
ggggttgaactcaacaagatcgatggcttgctgcaactctatcttgggcaaattctattg
agcgatccaaattag
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