Shewanella mesophila: K0I73_06800
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Entry
K0I73_06800 CDS
T09171
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
smes
Shewanella mesophila
Brite
KEGG Orthology (KO) [BR:
smes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smes03032
]
K0I73_06800 (hupB)
03036 Chromosome and associated proteins [BR:
smes03036
]
K0I73_06800 (hupB)
03400 DNA repair and recombination proteins [BR:
smes03400
]
K0I73_06800 (hupB)
DNA replication proteins [BR:
smes03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
K0I73_06800 (hupB)
Chromosome and associated proteins [BR:
smes03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
K0I73_06800 (hupB)
DNA repair and recombination proteins [BR:
smes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
K0I73_06800 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
VWA_3
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
QYJ87406
LinkDB
All DBs
Position
1549100..1549372
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIEKIASGADISKAAAGRALDSFISAVTDGLKEGDKISLVGFGTFEVRQRAERTG
RNPQTGKEIKIAAANIPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatctgaactaatcgagaaaatcgcttctggtgctgacatttctaaagcggct
gctggccgtgctctagattcttttatttctgctgtgactgatggtctaaaagaaggcgat
aaaatttctctagttggttttggtacttttgaagttcgtcaacgtgcagagcgtactggt
cgcaacccacagacgggtaaagagatcaagattgcagcggcaaatattcctgcattcaaa
gcaggtaaagcacttaaagacgctgtaaactaa
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